Multimodal 3D ultrasound and CT in image-guided spinal surgery: public database and new registration algorithms
Purpose Accurate multimodal registration of intraoperative ultrasound (US) and preoperative computed tomography (CT) is a challenging problem. Construction of public datasets of US and CT images can accelerate the development of such image registration techniques. This can help ensure the accuracy a...
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Veröffentlicht in: | International journal for computer assisted radiology and surgery 2021-04, Vol.16 (4), p.555-565 |
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container_title | International journal for computer assisted radiology and surgery |
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creator | Masoumi, Nima Belasso, Clyde J. Ahmad, M. Omair Benali, Habib Xiao, Yiming Rivaz, Hassan |
description | Purpose
Accurate multimodal registration of intraoperative ultrasound (US) and preoperative computed tomography (CT) is a challenging problem. Construction of public datasets of US and CT images can accelerate the development of such image registration techniques. This can help ensure the accuracy and safety of spinal surgeries using image-guided surgery systems where an image registration is employed. In addition, we present two algorithms to register US and CT images.
Methods
We present three different datasets of vertebrae with corresponding CT, US, and simulated US images. For each of the two latter datasets, we also provide 16 landmark pairs of matching structures between the CT and US images and performed fiducial registration to acquire a silver standard for assessing image registration. Besides, we proposed two patch-based rigid image registration algorithms, one based on normalized cross-correlation (NCC) and the other based on correlation ratio (CR) to register misaligned CT and US images.
Results
The CT and corresponding US images of the proposed database were pre-processed and misaligned with different error intervals, resulting in 6000 registration problems solved using both NCC and CR methods. Our results show that the methods were successful in aligning the pre-processed CT and US images by decreasing the warping index.
Conclusions
The database provides a resource for evaluating image registration techniques. The simulated data have two applications. First, they provide the gold standard ground-truth which is difficult to obtain with ex vivo and in vivo data for validating US-CT registration methods. Second, the simulated US images can be used to validate real-time US simulation methods. Besides, the proposed image registration techniques can be useful for developing methods in clinical application. |
doi_str_mv | 10.1007/s11548-021-02323-2 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_2499006634</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2499006634</sourcerecordid><originalsourceid>FETCH-LOGICAL-c375t-c5ad744688e95826153be2fb83d9d5d427cfe07d6f061c36a569753dc51aa1c3</originalsourceid><addsrcrecordid>eNp9kUtPxCAUhYnROOPjD7gwJG7cVHm3dWfGZ6JxM3tCC62YtoxQYubfy0x9JC5c3MCF7xzCPQCcYHSBEcovA8acFRkiOBUlNCM7YI4LgTPBSLn7s8doBg5CeEOI8ZzyfTCjVBSUMzYH7jl2o-2dVh2kNzA1XgUXBw1VqsUS2gHaXrUma6PVRsOwskNiQ_St8esruIpVZ2uo1agqFcxWNpgP6E1rQzIbrRug6lrn7fjahyOw16gumOOv9RAs726Xi4fs6eX-cXH9lNU052NWc6VzxkRRmJIXRGBOK0OaqqC61FwzkteNQbkWDRK4pkJxUeac6ppjpdLBITifbFfevUcTRtnbUJuuU4NxMUjCyhIhIShL6Nkf9M1Fn_6YKI4pz8uSkUSRiaq9C8GbRq58motfS4zkJg05pSFTGnKbhtyITr-sY9Ub_SP5Hn8C6ASEdDWkgf6-_Y_tJ6IslSU</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2513579942</pqid></control><display><type>article</type><title>Multimodal 3D ultrasound and CT in image-guided spinal surgery: public database and new registration algorithms</title><source>SpringerLink Journals - AutoHoldings</source><creator>Masoumi, Nima ; Belasso, Clyde J. ; Ahmad, M. Omair ; Benali, Habib ; Xiao, Yiming ; Rivaz, Hassan</creator><creatorcontrib>Masoumi, Nima ; Belasso, Clyde J. ; Ahmad, M. Omair ; Benali, Habib ; Xiao, Yiming ; Rivaz, Hassan</creatorcontrib><description>Purpose
Accurate multimodal registration of intraoperative ultrasound (US) and preoperative computed tomography (CT) is a challenging problem. Construction of public datasets of US and CT images can accelerate the development of such image registration techniques. This can help ensure the accuracy and safety of spinal surgeries using image-guided surgery systems where an image registration is employed. In addition, we present two algorithms to register US and CT images.
Methods
We present three different datasets of vertebrae with corresponding CT, US, and simulated US images. For each of the two latter datasets, we also provide 16 landmark pairs of matching structures between the CT and US images and performed fiducial registration to acquire a silver standard for assessing image registration. Besides, we proposed two patch-based rigid image registration algorithms, one based on normalized cross-correlation (NCC) and the other based on correlation ratio (CR) to register misaligned CT and US images.
Results
The CT and corresponding US images of the proposed database were pre-processed and misaligned with different error intervals, resulting in 6000 registration problems solved using both NCC and CR methods. Our results show that the methods were successful in aligning the pre-processed CT and US images by decreasing the warping index.
Conclusions
The database provides a resource for evaluating image registration techniques. The simulated data have two applications. First, they provide the gold standard ground-truth which is difficult to obtain with ex vivo and in vivo data for validating US-CT registration methods. Second, the simulated US images can be used to validate real-time US simulation methods. Besides, the proposed image registration techniques can be useful for developing methods in clinical application.</description><identifier>ISSN: 1861-6410</identifier><identifier>EISSN: 1861-6429</identifier><identifier>DOI: 10.1007/s11548-021-02323-2</identifier><identifier>PMID: 33683544</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Algorithms ; Back surgery ; Computed tomography ; Computer Imaging ; Computer Science ; Cross correlation ; Datasets ; Health Informatics ; Image acquisition ; Image registration ; Imaging ; In vivo methods and tests ; Medical imaging ; Medicine ; Medicine & Public Health ; Pattern Recognition and Graphics ; Radiology ; Registration ; Review Article ; Simulation ; Surgery ; Ultrasonic imaging ; Ultrasound ; Vertebrae ; Vision</subject><ispartof>International journal for computer assisted radiology and surgery, 2021-04, Vol.16 (4), p.555-565</ispartof><rights>CARS 2021</rights><rights>CARS 2021.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c375t-c5ad744688e95826153be2fb83d9d5d427cfe07d6f061c36a569753dc51aa1c3</citedby><cites>FETCH-LOGICAL-c375t-c5ad744688e95826153be2fb83d9d5d427cfe07d6f061c36a569753dc51aa1c3</cites><orcidid>0000-0002-2918-7812</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11548-021-02323-2$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11548-021-02323-2$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33683544$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Masoumi, Nima</creatorcontrib><creatorcontrib>Belasso, Clyde J.</creatorcontrib><creatorcontrib>Ahmad, M. Omair</creatorcontrib><creatorcontrib>Benali, Habib</creatorcontrib><creatorcontrib>Xiao, Yiming</creatorcontrib><creatorcontrib>Rivaz, Hassan</creatorcontrib><title>Multimodal 3D ultrasound and CT in image-guided spinal surgery: public database and new registration algorithms</title><title>International journal for computer assisted radiology and surgery</title><addtitle>Int J CARS</addtitle><addtitle>Int J Comput Assist Radiol Surg</addtitle><description>Purpose
Accurate multimodal registration of intraoperative ultrasound (US) and preoperative computed tomography (CT) is a challenging problem. Construction of public datasets of US and CT images can accelerate the development of such image registration techniques. This can help ensure the accuracy and safety of spinal surgeries using image-guided surgery systems where an image registration is employed. In addition, we present two algorithms to register US and CT images.
Methods
We present three different datasets of vertebrae with corresponding CT, US, and simulated US images. For each of the two latter datasets, we also provide 16 landmark pairs of matching structures between the CT and US images and performed fiducial registration to acquire a silver standard for assessing image registration. Besides, we proposed two patch-based rigid image registration algorithms, one based on normalized cross-correlation (NCC) and the other based on correlation ratio (CR) to register misaligned CT and US images.
Results
The CT and corresponding US images of the proposed database were pre-processed and misaligned with different error intervals, resulting in 6000 registration problems solved using both NCC and CR methods. Our results show that the methods were successful in aligning the pre-processed CT and US images by decreasing the warping index.
Conclusions
The database provides a resource for evaluating image registration techniques. The simulated data have two applications. First, they provide the gold standard ground-truth which is difficult to obtain with ex vivo and in vivo data for validating US-CT registration methods. Second, the simulated US images can be used to validate real-time US simulation methods. Besides, the proposed image registration techniques can be useful for developing methods in clinical application.</description><subject>Algorithms</subject><subject>Back surgery</subject><subject>Computed tomography</subject><subject>Computer Imaging</subject><subject>Computer Science</subject><subject>Cross correlation</subject><subject>Datasets</subject><subject>Health Informatics</subject><subject>Image acquisition</subject><subject>Image registration</subject><subject>Imaging</subject><subject>In vivo methods and tests</subject><subject>Medical imaging</subject><subject>Medicine</subject><subject>Medicine & Public Health</subject><subject>Pattern Recognition and Graphics</subject><subject>Radiology</subject><subject>Registration</subject><subject>Review Article</subject><subject>Simulation</subject><subject>Surgery</subject><subject>Ultrasonic imaging</subject><subject>Ultrasound</subject><subject>Vertebrae</subject><subject>Vision</subject><issn>1861-6410</issn><issn>1861-6429</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><recordid>eNp9kUtPxCAUhYnROOPjD7gwJG7cVHm3dWfGZ6JxM3tCC62YtoxQYubfy0x9JC5c3MCF7xzCPQCcYHSBEcovA8acFRkiOBUlNCM7YI4LgTPBSLn7s8doBg5CeEOI8ZzyfTCjVBSUMzYH7jl2o-2dVh2kNzA1XgUXBw1VqsUS2gHaXrUma6PVRsOwskNiQ_St8esruIpVZ2uo1agqFcxWNpgP6E1rQzIbrRug6lrn7fjahyOw16gumOOv9RAs726Xi4fs6eX-cXH9lNU052NWc6VzxkRRmJIXRGBOK0OaqqC61FwzkteNQbkWDRK4pkJxUeac6ppjpdLBITifbFfevUcTRtnbUJuuU4NxMUjCyhIhIShL6Nkf9M1Fn_6YKI4pz8uSkUSRiaq9C8GbRq58motfS4zkJg05pSFTGnKbhtyITr-sY9Ub_SP5Hn8C6ASEdDWkgf6-_Y_tJ6IslSU</recordid><startdate>20210401</startdate><enddate>20210401</enddate><creator>Masoumi, Nima</creator><creator>Belasso, Clyde J.</creator><creator>Ahmad, M. Omair</creator><creator>Benali, Habib</creator><creator>Xiao, Yiming</creator><creator>Rivaz, Hassan</creator><general>Springer International Publishing</general><general>Springer Nature B.V</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-2918-7812</orcidid></search><sort><creationdate>20210401</creationdate><title>Multimodal 3D ultrasound and CT in image-guided spinal surgery: public database and new registration algorithms</title><author>Masoumi, Nima ; Belasso, Clyde J. ; Ahmad, M. Omair ; Benali, Habib ; Xiao, Yiming ; Rivaz, Hassan</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c375t-c5ad744688e95826153be2fb83d9d5d427cfe07d6f061c36a569753dc51aa1c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Algorithms</topic><topic>Back surgery</topic><topic>Computed tomography</topic><topic>Computer Imaging</topic><topic>Computer Science</topic><topic>Cross correlation</topic><topic>Datasets</topic><topic>Health Informatics</topic><topic>Image acquisition</topic><topic>Image registration</topic><topic>Imaging</topic><topic>In vivo methods and tests</topic><topic>Medical imaging</topic><topic>Medicine</topic><topic>Medicine & Public Health</topic><topic>Pattern Recognition and Graphics</topic><topic>Radiology</topic><topic>Registration</topic><topic>Review Article</topic><topic>Simulation</topic><topic>Surgery</topic><topic>Ultrasonic imaging</topic><topic>Ultrasound</topic><topic>Vertebrae</topic><topic>Vision</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Masoumi, Nima</creatorcontrib><creatorcontrib>Belasso, Clyde J.</creatorcontrib><creatorcontrib>Ahmad, M. Omair</creatorcontrib><creatorcontrib>Benali, Habib</creatorcontrib><creatorcontrib>Xiao, Yiming</creatorcontrib><creatorcontrib>Rivaz, Hassan</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal for computer assisted radiology and surgery</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Masoumi, Nima</au><au>Belasso, Clyde J.</au><au>Ahmad, M. Omair</au><au>Benali, Habib</au><au>Xiao, Yiming</au><au>Rivaz, Hassan</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Multimodal 3D ultrasound and CT in image-guided spinal surgery: public database and new registration algorithms</atitle><jtitle>International journal for computer assisted radiology and surgery</jtitle><stitle>Int J CARS</stitle><addtitle>Int J Comput Assist Radiol Surg</addtitle><date>2021-04-01</date><risdate>2021</risdate><volume>16</volume><issue>4</issue><spage>555</spage><epage>565</epage><pages>555-565</pages><issn>1861-6410</issn><eissn>1861-6429</eissn><abstract>Purpose
Accurate multimodal registration of intraoperative ultrasound (US) and preoperative computed tomography (CT) is a challenging problem. Construction of public datasets of US and CT images can accelerate the development of such image registration techniques. This can help ensure the accuracy and safety of spinal surgeries using image-guided surgery systems where an image registration is employed. In addition, we present two algorithms to register US and CT images.
Methods
We present three different datasets of vertebrae with corresponding CT, US, and simulated US images. For each of the two latter datasets, we also provide 16 landmark pairs of matching structures between the CT and US images and performed fiducial registration to acquire a silver standard for assessing image registration. Besides, we proposed two patch-based rigid image registration algorithms, one based on normalized cross-correlation (NCC) and the other based on correlation ratio (CR) to register misaligned CT and US images.
Results
The CT and corresponding US images of the proposed database were pre-processed and misaligned with different error intervals, resulting in 6000 registration problems solved using both NCC and CR methods. Our results show that the methods were successful in aligning the pre-processed CT and US images by decreasing the warping index.
Conclusions
The database provides a resource for evaluating image registration techniques. The simulated data have two applications. First, they provide the gold standard ground-truth which is difficult to obtain with ex vivo and in vivo data for validating US-CT registration methods. Second, the simulated US images can be used to validate real-time US simulation methods. Besides, the proposed image registration techniques can be useful for developing methods in clinical application.</abstract><cop>Cham</cop><pub>Springer International Publishing</pub><pmid>33683544</pmid><doi>10.1007/s11548-021-02323-2</doi><tpages>11</tpages><orcidid>https://orcid.org/0000-0002-2918-7812</orcidid></addata></record> |
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subjects | Algorithms Back surgery Computed tomography Computer Imaging Computer Science Cross correlation Datasets Health Informatics Image acquisition Image registration Imaging In vivo methods and tests Medical imaging Medicine Medicine & Public Health Pattern Recognition and Graphics Radiology Registration Review Article Simulation Surgery Ultrasonic imaging Ultrasound Vertebrae Vision |
title | Multimodal 3D ultrasound and CT in image-guided spinal surgery: public database and new registration algorithms |
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