Heavy-metal resistance mechanisms developed by bacteria from Lerma–Chapala basin
Heavy-metal (HM) contamination is a huge environmental problem in many countries including Mexico. Currently, microorganisms with multiple heavy-metal resistance and/or plant-promoting characteristics have been widely used for bioremediation of HM-contaminated soils. The aim of the study was isolate...
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Veröffentlicht in: | Archives of microbiology 2021-05, Vol.203 (4), p.1807-1823 |
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container_title | Archives of microbiology |
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creator | Arroyo-Herrera, Ivan Román-Ponce, Brenda Reséndiz-Martínez, Ana Laura Estrada-de los Santos, Paulina Wang, En Tao Vásquez-Murrieta, María Soledad |
description | Heavy-metal (HM) contamination is a huge environmental problem in many countries including Mexico. Currently, microorganisms with multiple heavy-metal resistance and/or plant-promoting characteristics have been widely used for bioremediation of HM-contaminated soils. The aim of the study was isolated bacteria with multiple heavy-metal resistance and to determinate the resistance mechanism developed by these organisms. A total of 138 aerobic bacteria were isolated from soil and sediments surrounding the Lerma–Chapala basin located in the boundary of the States of Michoacán and Jalisco states of Mexico. One hundred and eight strains showed at least 1 plant growth-promoting features. The Lerma–Chapala basin bacteria were also resistant to high concentrations of HMs including the metalloid arsenic. Sequence analysis of 16S RNA genes reveled that these bacteria were mainly affiliated to the phyla
Proteobacteria
(38%),
Firmicutes
(31%) and
Actinobacteria
(25%), covering 21 genera with
Bacillus
as the most abundant one. Among them, at least 27 putative novel species were detected in the genera
Acinetobacter, Arthrobacter, Bacillus, Agrobacterium, Dyadobacter, Enterobacter, Exiguobacterium, Kluyvera, Micrococcus, Microbacterium
and
Psychrobacter
. In addition, these bacteria developed various heavy-metal-resistance mechanisms, such as biosorption/bioaccumulation, immobilization and detoxification. Therefore, the bacteria isolated from soils and sediments of Lerma–Chapala basin could be used in bioremediation strategies. |
doi_str_mv | 10.1007/s00203-020-02140-2 |
format | Article |
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Proteobacteria
(38%),
Firmicutes
(31%) and
Actinobacteria
(25%), covering 21 genera with
Bacillus
as the most abundant one. Among them, at least 27 putative novel species were detected in the genera
Acinetobacter, Arthrobacter, Bacillus, Agrobacterium, Dyadobacter, Enterobacter, Exiguobacterium, Kluyvera, Micrococcus, Microbacterium
and
Psychrobacter
. In addition, these bacteria developed various heavy-metal-resistance mechanisms, such as biosorption/bioaccumulation, immobilization and detoxification. Therefore, the bacteria isolated from soils and sediments of Lerma–Chapala basin could be used in bioremediation strategies.</description><identifier>ISSN: 0302-8933</identifier><identifier>EISSN: 1432-072X</identifier><identifier>DOI: 10.1007/s00203-020-02140-2</identifier><identifier>PMID: 33491161</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Aerobic bacteria ; Arsenic ; Arsenic - analysis ; Arthrobacter ; Bacillus ; Bacteria ; Bacteria - genetics ; Bacteria - isolation & purification ; Bacteria - metabolism ; Bioaccumulation ; Biochemistry ; Biodegradation, Environmental ; Biomedical and Life Sciences ; Bioremediation ; Biosorption ; Biotechnology ; Cell Biology ; Contamination ; Detoxification ; Drug Resistance, Bacterial - genetics ; Ecology ; Heavy metals ; Immobilization ; Life Sciences ; Metal concentrations ; Metals, Heavy - analysis ; Metals, Heavy - metabolism ; Mexico ; Microbial Ecology ; Microbiology ; Microorganisms ; Nucleotide sequence ; Original Paper ; Plant Development ; Plant growth ; Sediments ; Sequence analysis ; Soil - chemistry ; Soil bacteria ; Soil contamination ; Soil Microbiology ; Soil microorganisms ; Soil Pollutants - analysis ; Soil pollution ; Soils</subject><ispartof>Archives of microbiology, 2021-05, Vol.203 (4), p.1807-1823</ispartof><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH, DE part of Springer Nature 2021</rights><rights>The Author(s), under exclusive licence to Springer-Verlag GmbH, DE part of Springer Nature 2021.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c375t-699aba5427d2912a3f310525e52a8488b6d43e9c6799a0cdafa3923ab93a3b4d3</citedby><cites>FETCH-LOGICAL-c375t-699aba5427d2912a3f310525e52a8488b6d43e9c6799a0cdafa3923ab93a3b4d3</cites><orcidid>0000-0002-3362-5408 ; 0000-0003-2407-0284</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00203-020-02140-2$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00203-020-02140-2$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27922,27923,41486,42555,51317</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33491161$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Arroyo-Herrera, Ivan</creatorcontrib><creatorcontrib>Román-Ponce, Brenda</creatorcontrib><creatorcontrib>Reséndiz-Martínez, Ana Laura</creatorcontrib><creatorcontrib>Estrada-de los Santos, Paulina</creatorcontrib><creatorcontrib>Wang, En Tao</creatorcontrib><creatorcontrib>Vásquez-Murrieta, María Soledad</creatorcontrib><title>Heavy-metal resistance mechanisms developed by bacteria from Lerma–Chapala basin</title><title>Archives of microbiology</title><addtitle>Arch Microbiol</addtitle><addtitle>Arch Microbiol</addtitle><description>Heavy-metal (HM) contamination is a huge environmental problem in many countries including Mexico. Currently, microorganisms with multiple heavy-metal resistance and/or plant-promoting characteristics have been widely used for bioremediation of HM-contaminated soils. The aim of the study was isolated bacteria with multiple heavy-metal resistance and to determinate the resistance mechanism developed by these organisms. A total of 138 aerobic bacteria were isolated from soil and sediments surrounding the Lerma–Chapala basin located in the boundary of the States of Michoacán and Jalisco states of Mexico. One hundred and eight strains showed at least 1 plant growth-promoting features. The Lerma–Chapala basin bacteria were also resistant to high concentrations of HMs including the metalloid arsenic. Sequence analysis of 16S RNA genes reveled that these bacteria were mainly affiliated to the phyla
Proteobacteria
(38%),
Firmicutes
(31%) and
Actinobacteria
(25%), covering 21 genera with
Bacillus
as the most abundant one. Among them, at least 27 putative novel species were detected in the genera
Acinetobacter, Arthrobacter, Bacillus, Agrobacterium, Dyadobacter, Enterobacter, Exiguobacterium, Kluyvera, Micrococcus, Microbacterium
and
Psychrobacter
. In addition, these bacteria developed various heavy-metal-resistance mechanisms, such as biosorption/bioaccumulation, immobilization and detoxification. Therefore, the bacteria isolated from soils and sediments of Lerma–Chapala basin could be used in bioremediation strategies.</description><subject>Aerobic bacteria</subject><subject>Arsenic</subject><subject>Arsenic - analysis</subject><subject>Arthrobacter</subject><subject>Bacillus</subject><subject>Bacteria</subject><subject>Bacteria - genetics</subject><subject>Bacteria - isolation & purification</subject><subject>Bacteria - metabolism</subject><subject>Bioaccumulation</subject><subject>Biochemistry</subject><subject>Biodegradation, Environmental</subject><subject>Biomedical and Life Sciences</subject><subject>Bioremediation</subject><subject>Biosorption</subject><subject>Biotechnology</subject><subject>Cell Biology</subject><subject>Contamination</subject><subject>Detoxification</subject><subject>Drug Resistance, Bacterial - genetics</subject><subject>Ecology</subject><subject>Heavy metals</subject><subject>Immobilization</subject><subject>Life Sciences</subject><subject>Metal concentrations</subject><subject>Metals, Heavy - analysis</subject><subject>Metals, Heavy - metabolism</subject><subject>Mexico</subject><subject>Microbial Ecology</subject><subject>Microbiology</subject><subject>Microorganisms</subject><subject>Nucleotide sequence</subject><subject>Original Paper</subject><subject>Plant Development</subject><subject>Plant growth</subject><subject>Sediments</subject><subject>Sequence analysis</subject><subject>Soil - chemistry</subject><subject>Soil bacteria</subject><subject>Soil contamination</subject><subject>Soil Microbiology</subject><subject>Soil microorganisms</subject><subject>Soil Pollutants - analysis</subject><subject>Soil pollution</subject><subject>Soils</subject><issn>0302-8933</issn><issn>1432-072X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kM1q3EAMx4eS0t1s-wI5BEMuvbjVSPbacwxL0gQWCiWB3gbZlhMv_tjMeAN76zv0DfMkndT5gBxyGM1BP_0lfkodafimAbLvHgCB4lDC0wnE-EHNdUIYQ4a_D9QcCDDODdFMHXq_AdCY5_knNSNKjNZLPVe_LoTv93EnI7eRE9_4kftSok7KW-4b3_mokntph61UUbGPCi5HcQ1HtRu6aC2u44c_f1e3vOWWQ9c3_Wf1sebWy5enf6Guz8-uVhfx-uePy9XpOi4pS8d4aQwXnCaYVWg0MtWkIcVUUuQ8yfNiWSUkplxmAYSy4prJIHFhiKlIKlqor1Pu1g13O_Gj7RpfSttyL8POW0xyyCgFTAN68gbdDDvXh-sspjosQxM0LRROVOkG753Uduuajt3earCPxu1k3IZi_xu3GIaOn6J3RSfVy8iz4gDQBPjQ6m_Eve5-J_YfWraLfQ</recordid><startdate>20210501</startdate><enddate>20210501</enddate><creator>Arroyo-Herrera, Ivan</creator><creator>Román-Ponce, Brenda</creator><creator>Reséndiz-Martínez, Ana Laura</creator><creator>Estrada-de los Santos, Paulina</creator><creator>Wang, En Tao</creator><creator>Vásquez-Murrieta, María Soledad</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-3362-5408</orcidid><orcidid>https://orcid.org/0000-0003-2407-0284</orcidid></search><sort><creationdate>20210501</creationdate><title>Heavy-metal resistance mechanisms developed by bacteria from Lerma–Chapala basin</title><author>Arroyo-Herrera, Ivan ; Román-Ponce, Brenda ; Reséndiz-Martínez, Ana Laura ; Estrada-de los Santos, Paulina ; Wang, En Tao ; Vásquez-Murrieta, María Soledad</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c375t-699aba5427d2912a3f310525e52a8488b6d43e9c6799a0cdafa3923ab93a3b4d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Aerobic bacteria</topic><topic>Arsenic</topic><topic>Arsenic - analysis</topic><topic>Arthrobacter</topic><topic>Bacillus</topic><topic>Bacteria</topic><topic>Bacteria - genetics</topic><topic>Bacteria - isolation & purification</topic><topic>Bacteria - metabolism</topic><topic>Bioaccumulation</topic><topic>Biochemistry</topic><topic>Biodegradation, Environmental</topic><topic>Biomedical and Life Sciences</topic><topic>Bioremediation</topic><topic>Biosorption</topic><topic>Biotechnology</topic><topic>Cell Biology</topic><topic>Contamination</topic><topic>Detoxification</topic><topic>Drug Resistance, Bacterial - genetics</topic><topic>Ecology</topic><topic>Heavy metals</topic><topic>Immobilization</topic><topic>Life Sciences</topic><topic>Metal concentrations</topic><topic>Metals, Heavy - analysis</topic><topic>Metals, Heavy - metabolism</topic><topic>Mexico</topic><topic>Microbial Ecology</topic><topic>Microbiology</topic><topic>Microorganisms</topic><topic>Nucleotide sequence</topic><topic>Original Paper</topic><topic>Plant Development</topic><topic>Plant growth</topic><topic>Sediments</topic><topic>Sequence analysis</topic><topic>Soil - 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Academic</collection><jtitle>Archives of microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Arroyo-Herrera, Ivan</au><au>Román-Ponce, Brenda</au><au>Reséndiz-Martínez, Ana Laura</au><au>Estrada-de los Santos, Paulina</au><au>Wang, En Tao</au><au>Vásquez-Murrieta, María Soledad</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Heavy-metal resistance mechanisms developed by bacteria from Lerma–Chapala basin</atitle><jtitle>Archives of microbiology</jtitle><stitle>Arch Microbiol</stitle><addtitle>Arch Microbiol</addtitle><date>2021-05-01</date><risdate>2021</risdate><volume>203</volume><issue>4</issue><spage>1807</spage><epage>1823</epage><pages>1807-1823</pages><issn>0302-8933</issn><eissn>1432-072X</eissn><abstract>Heavy-metal (HM) contamination is a huge environmental problem in many countries including Mexico. Currently, microorganisms with multiple heavy-metal resistance and/or plant-promoting characteristics have been widely used for bioremediation of HM-contaminated soils. The aim of the study was isolated bacteria with multiple heavy-metal resistance and to determinate the resistance mechanism developed by these organisms. A total of 138 aerobic bacteria were isolated from soil and sediments surrounding the Lerma–Chapala basin located in the boundary of the States of Michoacán and Jalisco states of Mexico. One hundred and eight strains showed at least 1 plant growth-promoting features. The Lerma–Chapala basin bacteria were also resistant to high concentrations of HMs including the metalloid arsenic. Sequence analysis of 16S RNA genes reveled that these bacteria were mainly affiliated to the phyla
Proteobacteria
(38%),
Firmicutes
(31%) and
Actinobacteria
(25%), covering 21 genera with
Bacillus
as the most abundant one. Among them, at least 27 putative novel species were detected in the genera
Acinetobacter, Arthrobacter, Bacillus, Agrobacterium, Dyadobacter, Enterobacter, Exiguobacterium, Kluyvera, Micrococcus, Microbacterium
and
Psychrobacter
. In addition, these bacteria developed various heavy-metal-resistance mechanisms, such as biosorption/bioaccumulation, immobilization and detoxification. Therefore, the bacteria isolated from soils and sediments of Lerma–Chapala basin could be used in bioremediation strategies.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>33491161</pmid><doi>10.1007/s00203-020-02140-2</doi><tpages>17</tpages><orcidid>https://orcid.org/0000-0002-3362-5408</orcidid><orcidid>https://orcid.org/0000-0003-2407-0284</orcidid></addata></record> |
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subjects | Aerobic bacteria Arsenic Arsenic - analysis Arthrobacter Bacillus Bacteria Bacteria - genetics Bacteria - isolation & purification Bacteria - metabolism Bioaccumulation Biochemistry Biodegradation, Environmental Biomedical and Life Sciences Bioremediation Biosorption Biotechnology Cell Biology Contamination Detoxification Drug Resistance, Bacterial - genetics Ecology Heavy metals Immobilization Life Sciences Metal concentrations Metals, Heavy - analysis Metals, Heavy - metabolism Mexico Microbial Ecology Microbiology Microorganisms Nucleotide sequence Original Paper Plant Development Plant growth Sediments Sequence analysis Soil - chemistry Soil bacteria Soil contamination Soil Microbiology Soil microorganisms Soil Pollutants - analysis Soil pollution Soils |
title | Heavy-metal resistance mechanisms developed by bacteria from Lerma–Chapala basin |
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