Characterization of the complete mitochondrial DNA sequence of the Ariosoma meeki (Anguilliformes, Congridae)
In this study, the complete mitochondrial genome of Ariosoma meeki was sequenced, assembled and annotated. The circular genome is 16,154 bp in length with nucleotide composition is 28.42% A, 26.53% T, 19.65% G, and 25.40% C and contains 13 protein-coding genes (PCGs), 21 transfer RNA genes (tRNAs),...
Gespeichert in:
| Veröffentlicht in: | Mitochondrial DNA. Part B. Resources 2020-07, Vol.5 (3), p.2539-2541 |
|---|---|
| Hauptverfasser: | , , , , , , , |
| Format: | Artikel |
| Sprache: | eng |
| Schlagworte: | |
| Online-Zugang: | Volltext |
| Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
| container_end_page | 2541 |
|---|---|
| container_issue | 3 |
| container_start_page | 2539 |
| container_title | Mitochondrial DNA. Part B. Resources |
| container_volume | 5 |
| creator | Liu, Zhi-Qiang Shen, Yao-zhong Zhao, Ming Wang, Wei Chen, Wei Ma, Chun-Yan Zhang, Feng-Ying Ma, Ling-Bo |
| description | In this study, the complete mitochondrial genome of Ariosoma meeki was sequenced, assembled and annotated. The circular genome is 16,154 bp in length with nucleotide composition is 28.42% A, 26.53% T, 19.65% G, and 25.40% C and contains 13 protein-coding genes (PCGs), 21 transfer RNA genes (tRNAs), 2 ribosomal RNA unit genes and a large non-coding region (putative control region). To further explore the evolution relationship of the Anguilliformes, we constructed the phylogenetic tree and found that the A. meeki had closer relationship with Ariosoma shiroanago. This study provided the valuable evidence on phylogenetic relationship of the A. meeki at the molecular level and essential resource for further study the molecular phylogenetic, biogeography and adaptive evolution of this lineage. |
| doi_str_mv | 10.1080/23802359.2020.1781557 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_infor</sourceid><recordid>TN_cdi_proquest_miscellaneous_2478771718</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><doaj_id>oai_doaj_org_article_47c24b12e97b4f12a46851b067bd72f3</doaj_id><sourcerecordid>2522514004</sourcerecordid><originalsourceid>FETCH-LOGICAL-c4257-201a537cec2bbbc117c8b4d4676cad54127fd5aae8ab08a2e5caf735ec5f413</originalsourceid><addsrcrecordid>eNp9kk9vEzEQxVcIRKvQjwBaiUuRmmJ77YxzQY1S_lSq4AB3a9Y7mzh47WBvQOXTs0uSquXAydab3zzb41cULzm75Eyzt6LSTFRqfimYGCTQXCl4UpyO-nQsPH2wPynOct4wxvisApjD8-KkqqQCrdRp0S3XmND2lNxv7F0MZWzLfk2ljd3WU09l5_po1zE0yaEvrz8vykw_dhQsHdFFcjHHDsuO6LsrzxdhtXPeuzamjvJFuYxhlVyD9OZF8axFn-nssE6Krx_ef1t-mt5--XizXNxOrRQKpoJxVBVYsqKua8s5WF3LRs5gZrFRkgtoG4VIGmumUZCy2EKlyKpW8mpS3Oxdm4gbs02uw3RnIjrzV4hpZTD1znoyEqyQNRc0h1q2XKCcacVrNoO6AdFWg9e7vdd2V3fUWAp9Qv_I9HEluLVZxZ8GQAuuR4Pzg0GKw9hybzqXLXmPgeIuGyFBA3AY2Enx-h90E3cpDIMyQgmhuGRMDpTaUzbFnBO195fhzIzpMMd0mDEd5pCOoe_Vw5fcdx2zMABXe8CF8efwV0y-MT3e-ZjahMG6bKr_n_EH-z3J7A</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2522514004</pqid></control><display><type>article</type><title>Characterization of the complete mitochondrial DNA sequence of the Ariosoma meeki (Anguilliformes, Congridae)</title><source>Taylor & Francis Open Access</source><source>DOAJ Directory of Open Access Journals</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>PubMed Central</source><creator>Liu, Zhi-Qiang ; Shen, Yao-zhong ; Zhao, Ming ; Wang, Wei ; Chen, Wei ; Ma, Chun-Yan ; Zhang, Feng-Ying ; Ma, Ling-Bo</creator><creatorcontrib>Liu, Zhi-Qiang ; Shen, Yao-zhong ; Zhao, Ming ; Wang, Wei ; Chen, Wei ; Ma, Chun-Yan ; Zhang, Feng-Ying ; Ma, Ling-Bo</creatorcontrib><description>In this study, the complete mitochondrial genome of Ariosoma meeki was sequenced, assembled and annotated. The circular genome is 16,154 bp in length with nucleotide composition is 28.42% A, 26.53% T, 19.65% G, and 25.40% C and contains 13 protein-coding genes (PCGs), 21 transfer RNA genes (tRNAs), 2 ribosomal RNA unit genes and a large non-coding region (putative control region). To further explore the evolution relationship of the Anguilliformes, we constructed the phylogenetic tree and found that the A. meeki had closer relationship with Ariosoma shiroanago. This study provided the valuable evidence on phylogenetic relationship of the A. meeki at the molecular level and essential resource for further study the molecular phylogenetic, biogeography and adaptive evolution of this lineage.</description><identifier>ISSN: 2380-2359</identifier><identifier>EISSN: 2380-2359</identifier><identifier>DOI: 10.1080/23802359.2020.1781557</identifier><identifier>PMID: 33457855</identifier><language>eng</language><publisher>England: Taylor & Francis</publisher><subject>Anguilliformes ; Ariosoma meeki ; Biogeography ; Evolution & development ; Genomes ; Mitochondrial DNA ; mitochondrial genome ; Mitogenome Announcement ; Nucleotide sequence ; phylogenetic relationship ; Phylogenetics ; Phylogeny ; rRNA ; Transfer RNA</subject><ispartof>Mitochondrial DNA. Part B. Resources, 2020-07, Vol.5 (3), p.2539-2541</ispartof><rights>2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. 2020</rights><rights>2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.</rights><rights>2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. This work is licensed under the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (the “License”). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. 2020 The Author(s)</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c4257-201a537cec2bbbc117c8b4d4676cad54127fd5aae8ab08a2e5caf735ec5f413</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782183/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC7782183/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,723,776,780,860,881,2096,27479,27901,27902,53766,53768,59116,59117</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33457855$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Liu, Zhi-Qiang</creatorcontrib><creatorcontrib>Shen, Yao-zhong</creatorcontrib><creatorcontrib>Zhao, Ming</creatorcontrib><creatorcontrib>Wang, Wei</creatorcontrib><creatorcontrib>Chen, Wei</creatorcontrib><creatorcontrib>Ma, Chun-Yan</creatorcontrib><creatorcontrib>Zhang, Feng-Ying</creatorcontrib><creatorcontrib>Ma, Ling-Bo</creatorcontrib><title>Characterization of the complete mitochondrial DNA sequence of the Ariosoma meeki (Anguilliformes, Congridae)</title><title>Mitochondrial DNA. Part B. Resources</title><addtitle>Mitochondrial DNA B Resour</addtitle><description>In this study, the complete mitochondrial genome of Ariosoma meeki was sequenced, assembled and annotated. The circular genome is 16,154 bp in length with nucleotide composition is 28.42% A, 26.53% T, 19.65% G, and 25.40% C and contains 13 protein-coding genes (PCGs), 21 transfer RNA genes (tRNAs), 2 ribosomal RNA unit genes and a large non-coding region (putative control region). To further explore the evolution relationship of the Anguilliformes, we constructed the phylogenetic tree and found that the A. meeki had closer relationship with Ariosoma shiroanago. This study provided the valuable evidence on phylogenetic relationship of the A. meeki at the molecular level and essential resource for further study the molecular phylogenetic, biogeography and adaptive evolution of this lineage.</description><subject>Anguilliformes</subject><subject>Ariosoma meeki</subject><subject>Biogeography</subject><subject>Evolution & development</subject><subject>Genomes</subject><subject>Mitochondrial DNA</subject><subject>mitochondrial genome</subject><subject>Mitogenome Announcement</subject><subject>Nucleotide sequence</subject><subject>phylogenetic relationship</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>rRNA</subject><subject>Transfer RNA</subject><issn>2380-2359</issn><issn>2380-2359</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>0YH</sourceid><sourceid>8G5</sourceid><sourceid>BENPR</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><sourceid>DOA</sourceid><recordid>eNp9kk9vEzEQxVcIRKvQjwBaiUuRmmJ77YxzQY1S_lSq4AB3a9Y7mzh47WBvQOXTs0uSquXAydab3zzb41cULzm75Eyzt6LSTFRqfimYGCTQXCl4UpyO-nQsPH2wPynOct4wxvisApjD8-KkqqQCrdRp0S3XmND2lNxv7F0MZWzLfk2ljd3WU09l5_po1zE0yaEvrz8vykw_dhQsHdFFcjHHDsuO6LsrzxdhtXPeuzamjvJFuYxhlVyD9OZF8axFn-nssE6Krx_ef1t-mt5--XizXNxOrRQKpoJxVBVYsqKua8s5WF3LRs5gZrFRkgtoG4VIGmumUZCy2EKlyKpW8mpS3Oxdm4gbs02uw3RnIjrzV4hpZTD1znoyEqyQNRc0h1q2XKCcacVrNoO6AdFWg9e7vdd2V3fUWAp9Qv_I9HEluLVZxZ8GQAuuR4Pzg0GKw9hybzqXLXmPgeIuGyFBA3AY2Enx-h90E3cpDIMyQgmhuGRMDpTaUzbFnBO195fhzIzpMMd0mDEd5pCOoe_Vw5fcdx2zMABXe8CF8efwV0y-MT3e-ZjahMG6bKr_n_EH-z3J7A</recordid><startdate>20200702</startdate><enddate>20200702</enddate><creator>Liu, Zhi-Qiang</creator><creator>Shen, Yao-zhong</creator><creator>Zhao, Ming</creator><creator>Wang, Wei</creator><creator>Chen, Wei</creator><creator>Ma, Chun-Yan</creator><creator>Zhang, Feng-Ying</creator><creator>Ma, Ling-Bo</creator><general>Taylor & Francis</general><general>Taylor & Francis Ltd</general><general>Taylor & Francis Group</general><scope>0YH</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7XB</scope><scope>8FD</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>M2O</scope><scope>MBDVC</scope><scope>P64</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20200702</creationdate><title>Characterization of the complete mitochondrial DNA sequence of the Ariosoma meeki (Anguilliformes, Congridae)</title><author>Liu, Zhi-Qiang ; Shen, Yao-zhong ; Zhao, Ming ; Wang, Wei ; Chen, Wei ; Ma, Chun-Yan ; Zhang, Feng-Ying ; Ma, Ling-Bo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4257-201a537cec2bbbc117c8b4d4676cad54127fd5aae8ab08a2e5caf735ec5f413</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Anguilliformes</topic><topic>Ariosoma meeki</topic><topic>Biogeography</topic><topic>Evolution & development</topic><topic>Genomes</topic><topic>Mitochondrial DNA</topic><topic>mitochondrial genome</topic><topic>Mitogenome Announcement</topic><topic>Nucleotide sequence</topic><topic>phylogenetic relationship</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>rRNA</topic><topic>Transfer RNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Liu, Zhi-Qiang</creatorcontrib><creatorcontrib>Shen, Yao-zhong</creatorcontrib><creatorcontrib>Zhao, Ming</creatorcontrib><creatorcontrib>Wang, Wei</creatorcontrib><creatorcontrib>Chen, Wei</creatorcontrib><creatorcontrib>Ma, Chun-Yan</creatorcontrib><creatorcontrib>Zhang, Feng-Ying</creatorcontrib><creatorcontrib>Ma, Ling-Bo</creatorcontrib><collection>Taylor & Francis Open Access</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Technology Research Database</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>Research Library</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Mitochondrial DNA. Part B. Resources</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Liu, Zhi-Qiang</au><au>Shen, Yao-zhong</au><au>Zhao, Ming</au><au>Wang, Wei</au><au>Chen, Wei</au><au>Ma, Chun-Yan</au><au>Zhang, Feng-Ying</au><au>Ma, Ling-Bo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Characterization of the complete mitochondrial DNA sequence of the Ariosoma meeki (Anguilliformes, Congridae)</atitle><jtitle>Mitochondrial DNA. Part B. Resources</jtitle><addtitle>Mitochondrial DNA B Resour</addtitle><date>2020-07-02</date><risdate>2020</risdate><volume>5</volume><issue>3</issue><spage>2539</spage><epage>2541</epage><pages>2539-2541</pages><issn>2380-2359</issn><eissn>2380-2359</eissn><abstract>In this study, the complete mitochondrial genome of Ariosoma meeki was sequenced, assembled and annotated. The circular genome is 16,154 bp in length with nucleotide composition is 28.42% A, 26.53% T, 19.65% G, and 25.40% C and contains 13 protein-coding genes (PCGs), 21 transfer RNA genes (tRNAs), 2 ribosomal RNA unit genes and a large non-coding region (putative control region). To further explore the evolution relationship of the Anguilliformes, we constructed the phylogenetic tree and found that the A. meeki had closer relationship with Ariosoma shiroanago. This study provided the valuable evidence on phylogenetic relationship of the A. meeki at the molecular level and essential resource for further study the molecular phylogenetic, biogeography and adaptive evolution of this lineage.</abstract><cop>England</cop><pub>Taylor & Francis</pub><pmid>33457855</pmid><doi>10.1080/23802359.2020.1781557</doi><tpages>3</tpages><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 2380-2359 |
| ispartof | Mitochondrial DNA. Part B. Resources, 2020-07, Vol.5 (3), p.2539-2541 |
| issn | 2380-2359 2380-2359 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_2478771718 |
| source | Taylor & Francis Open Access; DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; PubMed Central |
| subjects | Anguilliformes Ariosoma meeki Biogeography Evolution & development Genomes Mitochondrial DNA mitochondrial genome Mitogenome Announcement Nucleotide sequence phylogenetic relationship Phylogenetics Phylogeny rRNA Transfer RNA |
| title | Characterization of the complete mitochondrial DNA sequence of the Ariosoma meeki (Anguilliformes, Congridae) |
| url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-13T13%3A14%3A40IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_infor&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Characterization%20of%20the%20complete%20mitochondrial%20DNA%20sequence%20of%20the%20Ariosoma%20meeki%20(Anguilliformes,%20Congridae)&rft.jtitle=Mitochondrial%20DNA.%20Part%20B.%20Resources&rft.au=Liu,%20Zhi-Qiang&rft.date=2020-07-02&rft.volume=5&rft.issue=3&rft.spage=2539&rft.epage=2541&rft.pages=2539-2541&rft.issn=2380-2359&rft.eissn=2380-2359&rft_id=info:doi/10.1080/23802359.2020.1781557&rft_dat=%3Cproquest_infor%3E2522514004%3C/proquest_infor%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2522514004&rft_id=info:pmid/33457855&rft_doaj_id=oai_doaj_org_article_47c24b12e97b4f12a46851b067bd72f3&rfr_iscdi=true |