Diversity and structure of soil bacterial community in intertidal zone of Daliao River estuary, Northeast China

Soil samples from the intertidal zone of Daliao River, Northeast China, were collected in three seasons (autumn, L1; winter, L2; and spring, L3) to evaluate the diversity and structure of bacterial community using high-throughput sequencing. Soil physicochemical characteristics varied greatly with s...

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Veröffentlicht in:Marine pollution bulletin 2021-02, Vol.163, p.111965-111965, Article 111965
Hauptverfasser: Guo, Chaochen, Zhang, Xuwang, Luan, Shimeng, Zhou, Hao, Liu, Lifen, Qu, Yuanyuan
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Zhang, Xuwang
Luan, Shimeng
Zhou, Hao
Liu, Lifen
Qu, Yuanyuan
description Soil samples from the intertidal zone of Daliao River, Northeast China, were collected in three seasons (autumn, L1; winter, L2; and spring, L3) to evaluate the diversity and structure of bacterial community using high-throughput sequencing. Soil physicochemical characteristics varied greatly with seasons, and the potential nitrification rates were detected in the range of 1.04–2.71 μg NO3−-N·g−1 dry soil·h−1 with the highest rate in spring (L3). Soil bacterial communities also differed seasonally, and nitrogen nutrients were the important variables affecting the bacterial communities as demonstrated by distance-based redundancy analysis and Mantel tests. Proteobacteria was the predominant phylum in soils showing a descending trend from L1 to L3. Woeseia and Ignatzschineria, both affiliating with Gammaproteobacteria, were the two most dominant genera, but they exerted different seasonal variations. The predicted functional profiles revealed 6 major nitrogen cycling processes, and the functional genes in relation to denitrification process were dominant in intertidal soils. •Physicochemical properties of soils varied greatly with seasons.•Potential nitrification rates were significantly higher in spring and autumn.•Nitrogen nutrients were the important variables in shaping bacterial communities.•Woeseia and Ignatzschineria were the dominant genera with opposite variations.•Functional genes in relation to denitrification were dominant in intertidal soils.
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The predicted functional profiles revealed 6 major nitrogen cycling processes, and the functional genes in relation to denitrification process were dominant in intertidal soils. •Physicochemical properties of soils varied greatly with seasons.•Potential nitrification rates were significantly higher in spring and autumn.•Nitrogen nutrients were the important variables in shaping bacterial communities.•Woeseia and Ignatzschineria were the dominant genera with opposite variations.•Functional genes in relation to denitrification were dominant in intertidal soils.</description><identifier>ISSN: 0025-326X</identifier><identifier>EISSN: 1879-3363</identifier><identifier>DOI: 10.1016/j.marpolbul.2020.111965</identifier><identifier>PMID: 33450443</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>Autumn ; Bacteria ; Bacteria - genetics ; Bacterial community ; China ; Denitrification ; Estuaries ; Estuarine dynamics ; Estuary ; Genes ; Intertidal environment ; Intertidal zone ; Next-generation sequencing ; Nitrification ; Nitrogen ; Nitrogen - analysis ; Nitrogen cycle ; Nitrogen metabolism ; Nutrients ; Redundancy ; Rivers ; Seasonal variation ; Seasonal variations ; Seasons ; Soil ; Soil Microbiology ; Soil microorganisms ; Soil structure ; Soils ; Spring ; Spring (season)</subject><ispartof>Marine pollution bulletin, 2021-02, Vol.163, p.111965-111965, Article 111965</ispartof><rights>2020 Elsevier Ltd</rights><rights>Copyright © 2020 Elsevier Ltd. 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subjects Autumn
Bacteria
Bacteria - genetics
Bacterial community
China
Denitrification
Estuaries
Estuarine dynamics
Estuary
Genes
Intertidal environment
Intertidal zone
Next-generation sequencing
Nitrification
Nitrogen
Nitrogen - analysis
Nitrogen cycle
Nitrogen metabolism
Nutrients
Redundancy
Rivers
Seasonal variation
Seasonal variations
Seasons
Soil
Soil Microbiology
Soil microorganisms
Soil structure
Soils
Spring
Spring (season)
title Diversity and structure of soil bacterial community in intertidal zone of Daliao River estuary, Northeast China
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