miqoGraph: fitting admixture graphs using mixed-integer quadratic optimization

Abstract Summary Admixture graphs represent the genetic relationship between a set of populations through splits, drift and admixture. In this article, we present the Julia package miqoGraph, which uses mixed-integer quadratic optimization to fit topology, drift lengths and admixture proportions sim...

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Veröffentlicht in:	Bioinformatics (Oxford, England) England), 2021-08, Vol.37 (16), p.2488-2490
Hauptverfasser:	Yan, Julia, Patterson, Nick, Narasimhan, Vagheesh M
Format:	Artikel
Sprache:	eng
Schlagworte:	Admixtures Availability Bioinformatics Drift Genetic relationship Graphs Mixed integer Phylogeny Population genetics Topology Topology optimization
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