MetaSleepLearner: A Pilot Study on Fast Adaptation of Bio-Signals-Based Sleep Stage Classifier to New Individual Subject Using Meta-Learning

Identifying bio-signals based-sleep stages requires time-consuming and tedious labor of skilled clinicians. Deep learning approaches have been introduced in order to challenge the automatic sleep stage classification conundrum. However, the difficulties can be posed in replacing the clinicians with...

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Veröffentlicht in:IEEE journal of biomedical and health informatics 2021-06, Vol.25 (6), p.1949-1963
Hauptverfasser: Banluesombatkul, Nannapas, Ouppaphan, Pichayoot, Leelaarporn, Pitshaporn, Lakhan, Payongkit, Chaitusaney, Busarakum, Jaimchariyatam, Nattapong, Chuangsuwanich, Ekapol, Chen, Wei, Phan, Huy, Dilokthanakul, Nat, Wilaiprasitporn, Theerawit
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container_end_page 1963
container_issue 6
container_start_page 1949
container_title IEEE journal of biomedical and health informatics
container_volume 25
creator Banluesombatkul, Nannapas
Ouppaphan, Pichayoot
Leelaarporn, Pitshaporn
Lakhan, Payongkit
Chaitusaney, Busarakum
Jaimchariyatam, Nattapong
Chuangsuwanich, Ekapol
Chen, Wei
Phan, Huy
Dilokthanakul, Nat
Wilaiprasitporn, Theerawit
description Identifying bio-signals based-sleep stages requires time-consuming and tedious labor of skilled clinicians. Deep learning approaches have been introduced in order to challenge the automatic sleep stage classification conundrum. However, the difficulties can be posed in replacing the clinicians with the automatic system due to the differences in many aspects found in individual bio-signals, causing the inconsistency in the performance of the model on every incoming individual. Thus, we aim to explore the feasibility of using a novel approach, capable of assisting the clinicians and lessening the workload. We propose the transfer learning framework, entitled MetaSleepLearner, based on Model Agnostic Meta-Learning (MAML), in order to transfer the acquired sleep staging knowledge from a large dataset to new individual subjects (source code is available at https://github.com/IoBT-VISTEC/MetaSleepLearner ). The framework was demonstrated to require the labelling of only a few sleep epochs by the clinicians and allow the remainder to be handled by the system. Layer-wise Relevance Propagation (LRP) was also applied to understand the learning course of our approach. In all acquired datasets, in comparison to the conventional approach, MetaSleepLearner achieved a range of 5.4% to 17.7% improvement with statistical difference in the mean of both approaches. The illustration of the model interpretation after the adaptation to each subject also confirmed that the performance was directed towards reasonable learning. MetaSleepLearner outperformed the conventional approaches as a result from the fine-tuning using the recordings of both healthy subjects and patients. This is the first work that investigated a non-conventional pre-training method, MAML, resulting in a possibility for human-machine collaboration in sleep stage classification and easing the burden of the clinicians in labelling the sleep stages through only several epochs rather than an entire recording.
doi_str_mv 10.1109/JBHI.2020.3037693
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Layer-wise Relevance Propagation (LRP) was also applied to understand the learning course of our approach. In all acquired datasets, in comparison to the conventional approach, MetaSleepLearner achieved a range of 5.4% to 17.7% improvement with statistical difference in the mean of both approaches. The illustration of the model interpretation after the adaptation to each subject also confirmed that the performance was directed towards reasonable learning. MetaSleepLearner outperformed the conventional approaches as a result from the fine-tuning using the recordings of both healthy subjects and patients. 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subjects Adaptation
Brain modeling
Classification
convolutional neural network
Data models
Datasets
Deep learning
Electroencephalography
Feature extraction
Knowledge acquisition
Labelling
Machine learning
meta-learning
pre-trained EEG
Signal classification
Sleep
Sleep stage classification
Source code
Task analysis
Training
Transfer learning
title MetaSleepLearner: A Pilot Study on Fast Adaptation of Bio-Signals-Based Sleep Stage Classifier to New Individual Subject Using Meta-Learning
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