The orphan nuclear receptor NR0B2 could be a novel susceptibility locus associated with microsatellite‐stable, APC mutation‐negative early‐onset colorectal carcinomas with metabolic manifestation
Colorectal cancer (CRC) is a high incidence cancer and major cause of cancer mortality. Though disease‐causing tumor suppressors for major syndromes are well characterized, about 10% of CRC is familial but without mutations in known tumor suppressors. We exhaustively screened 100 polyposis families...
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Veröffentlicht in: | Genes chromosomes & cancer 2021-02, Vol.60 (2), p.61-72 |
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description | Colorectal cancer (CRC) is a high incidence cancer and major cause of cancer mortality. Though disease‐causing tumor suppressors for major syndromes are well characterized, about 10% of CRC is familial but without mutations in known tumor suppressors. We exhaustively screened 100 polyposis families for APC germline mutations and identified 13, which are APC mutation‐negative, microsatellite‐stable (MSS), and with undetectable mutation in known tumor suppressors. Whole exome sequencing in three probands uncovered two with germline frameshift NR0B2 mutations, c.293_301delTTGGGTTGGinsAC and c.227delT. Sanger Sequencing identified a third proband with NR0B2 c.157_166delCATCGCACCT frameshift mutation. All three mutations deleted the C‐terminus activation/repression domain of NR0B2, thus are loss‐of‐function mutations. Real‐time RT‐PCR performed on tumor and matched mucosa of one patient revealed that NR0B2 downstream targets, SMAD3 was derepressed while GLI1 was downregulated in the colonic mucosa compared to healthy controls. Truncated NR0B2 molecule was predicted to have weakened binding with interacting partners SMAD3, GLI1, BCL2, and RXRα, implying perturbation of TGF‐β, Hedgehog, anti‐apoptotic and nuclear hormone receptor signaling pathways. Immunostaining also revealed nuclear retention of the most severely truncated NR0B2 molecule compared to the wildtype. Microsatellite and sequencing analysis did not detect loss of wildtype allele in probands' tumors. The patient who acquired somatic KRAS mutation progressed rapidly whist the other two patients manifested with late‐onset obesity and diabetes. We propose that haploinsufficiency of NR0B2 is associated with a novel CRC syndrome with metabolic phenotypes. |
doi_str_mv | 10.1002/gcc.22904 |
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Though disease‐causing tumor suppressors for major syndromes are well characterized, about 10% of CRC is familial but without mutations in known tumor suppressors. We exhaustively screened 100 polyposis families for APC germline mutations and identified 13, which are APC mutation‐negative, microsatellite‐stable (MSS), and with undetectable mutation in known tumor suppressors. Whole exome sequencing in three probands uncovered two with germline frameshift NR0B2 mutations, c.293_301delTTGGGTTGGinsAC and c.227delT. Sanger Sequencing identified a third proband with NR0B2 c.157_166delCATCGCACCT frameshift mutation. All three mutations deleted the C‐terminus activation/repression domain of NR0B2, thus are loss‐of‐function mutations. Real‐time RT‐PCR performed on tumor and matched mucosa of one patient revealed that NR0B2 downstream targets, SMAD3 was derepressed while GLI1 was downregulated in the colonic mucosa compared to healthy controls. Truncated NR0B2 molecule was predicted to have weakened binding with interacting partners SMAD3, GLI1, BCL2, and RXRα, implying perturbation of TGF‐β, Hedgehog, anti‐apoptotic and nuclear hormone receptor signaling pathways. Immunostaining also revealed nuclear retention of the most severely truncated NR0B2 molecule compared to the wildtype. Microsatellite and sequencing analysis did not detect loss of wildtype allele in probands' tumors. The patient who acquired somatic KRAS mutation progressed rapidly whist the other two patients manifested with late‐onset obesity and diabetes. We propose that haploinsufficiency of NR0B2 is associated with a novel CRC syndrome with metabolic phenotypes.</description><identifier>ISSN: 1045-2257</identifier><identifier>EISSN: 1098-2264</identifier><identifier>DOI: 10.1002/gcc.22904</identifier><identifier>PMID: 33094510</identifier><language>eng</language><publisher>Hoboken, USA: John Wiley & Sons, Inc</publisher><subject>Adenomatous polyposis coli ; Adenomatous Polyposis Coli Protein - genetics ; Adult ; Age of Onset ; Apoptosis ; Cancer ; Carcinoma - genetics ; Carcinoma - pathology ; Colorectal cancer ; Colorectal carcinoma ; Colorectal Neoplasms - genetics ; Colorectal Neoplasms - pathology ; Diabetes mellitus ; early‐onset colorectal cancer ; Female ; Frameshift mutation ; frameshift variant ; Genetic disorders ; Haploinsufficiency ; Humans ; Male ; Metabolism ; Microsatellite Repeats - genetics ; microsatellite‐stable ; Middle Aged ; Mucosa ; Mutation ; NR0B2 ; orphan nuclear receptor ; Pedigree ; Phenotypes ; Polyposis ; Polyps ; Protein Binding ; Proto-Oncogene Proteins c-bcl-2 - metabolism ; Receptors, Cytoplasmic and Nuclear - genetics ; Receptors, Cytoplasmic and Nuclear - metabolism ; Retinoid X Receptor alpha - metabolism ; Sequence analysis ; Smad3 protein ; Smad3 Protein - metabolism ; Susceptibility ; Tumors ; Zinc Finger Protein GLI1 - metabolism</subject><ispartof>Genes chromosomes & cancer, 2021-02, Vol.60 (2), p.61-72</ispartof><rights>2020 Wiley Periodicals LLC.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3534-da7e7e7470c23ea9d333e52ce69e9cbf855eee792edad5bb3cf20f92112b67f83</citedby><cites>FETCH-LOGICAL-c3534-da7e7e7470c23ea9d333e52ce69e9cbf855eee792edad5bb3cf20f92112b67f83</cites><orcidid>0000-0003-0403-8703 ; 0000-0002-2277-8783 ; 0000-0003-3352-2000</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fgcc.22904$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fgcc.22904$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1417,27924,27925,45574,45575</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/33094510$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lam, Kuen Kuen</creatorcontrib><creatorcontrib>Sethi, Raman</creatorcontrib><creatorcontrib>Tan, Grace</creatorcontrib><creatorcontrib>Tomar, Swati</creatorcontrib><creatorcontrib>Lo, Michelle</creatorcontrib><creatorcontrib>Loi, Carol</creatorcontrib><creatorcontrib>Tang, Choong Leong</creatorcontrib><creatorcontrib>Tan, Emile</creatorcontrib><creatorcontrib>Lai, Poh San</creatorcontrib><creatorcontrib>Cheah, Peh Yean</creatorcontrib><title>The orphan nuclear receptor NR0B2 could be a novel susceptibility locus associated with microsatellite‐stable, APC mutation‐negative early‐onset colorectal carcinomas with metabolic manifestation</title><title>Genes chromosomes & cancer</title><addtitle>Genes Chromosomes Cancer</addtitle><description>Colorectal cancer (CRC) is a high incidence cancer and major cause of cancer mortality. Though disease‐causing tumor suppressors for major syndromes are well characterized, about 10% of CRC is familial but without mutations in known tumor suppressors. We exhaustively screened 100 polyposis families for APC germline mutations and identified 13, which are APC mutation‐negative, microsatellite‐stable (MSS), and with undetectable mutation in known tumor suppressors. Whole exome sequencing in three probands uncovered two with germline frameshift NR0B2 mutations, c.293_301delTTGGGTTGGinsAC and c.227delT. Sanger Sequencing identified a third proband with NR0B2 c.157_166delCATCGCACCT frameshift mutation. All three mutations deleted the C‐terminus activation/repression domain of NR0B2, thus are loss‐of‐function mutations. Real‐time RT‐PCR performed on tumor and matched mucosa of one patient revealed that NR0B2 downstream targets, SMAD3 was derepressed while GLI1 was downregulated in the colonic mucosa compared to healthy controls. Truncated NR0B2 molecule was predicted to have weakened binding with interacting partners SMAD3, GLI1, BCL2, and RXRα, implying perturbation of TGF‐β, Hedgehog, anti‐apoptotic and nuclear hormone receptor signaling pathways. Immunostaining also revealed nuclear retention of the most severely truncated NR0B2 molecule compared to the wildtype. Microsatellite and sequencing analysis did not detect loss of wildtype allele in probands' tumors. The patient who acquired somatic KRAS mutation progressed rapidly whist the other two patients manifested with late‐onset obesity and diabetes. We propose that haploinsufficiency of NR0B2 is associated with a novel CRC syndrome with metabolic phenotypes.</description><subject>Adenomatous polyposis coli</subject><subject>Adenomatous Polyposis Coli Protein - genetics</subject><subject>Adult</subject><subject>Age of Onset</subject><subject>Apoptosis</subject><subject>Cancer</subject><subject>Carcinoma - genetics</subject><subject>Carcinoma - pathology</subject><subject>Colorectal cancer</subject><subject>Colorectal carcinoma</subject><subject>Colorectal Neoplasms - genetics</subject><subject>Colorectal Neoplasms - pathology</subject><subject>Diabetes mellitus</subject><subject>early‐onset colorectal cancer</subject><subject>Female</subject><subject>Frameshift mutation</subject><subject>frameshift variant</subject><subject>Genetic disorders</subject><subject>Haploinsufficiency</subject><subject>Humans</subject><subject>Male</subject><subject>Metabolism</subject><subject>Microsatellite Repeats - genetics</subject><subject>microsatellite‐stable</subject><subject>Middle Aged</subject><subject>Mucosa</subject><subject>Mutation</subject><subject>NR0B2</subject><subject>orphan nuclear receptor</subject><subject>Pedigree</subject><subject>Phenotypes</subject><subject>Polyposis</subject><subject>Polyps</subject><subject>Protein Binding</subject><subject>Proto-Oncogene Proteins c-bcl-2 - metabolism</subject><subject>Receptors, Cytoplasmic and Nuclear - genetics</subject><subject>Receptors, Cytoplasmic and Nuclear - metabolism</subject><subject>Retinoid X Receptor alpha - metabolism</subject><subject>Sequence analysis</subject><subject>Smad3 protein</subject><subject>Smad3 Protein - metabolism</subject><subject>Susceptibility</subject><subject>Tumors</subject><subject>Zinc Finger Protein GLI1 - metabolism</subject><issn>1045-2257</issn><issn>1098-2264</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2021</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kc9u1DAQhy0EoqVw4AWQJS4gsa3jP5v4WCIoSBUgVM6R40y6rhx7seNWe-MReC1egydhliwckJAPHlufvhnNj5CnFTutGONn19aecq6ZvEeOK6abFedreX9fS4W1qo_Io5xvGGNrodVDciQE01JV7Jj8uNoAjWm7MYGGYj2YRBNY2M4x0Q-f2WtObSx-oD1QQ0O8BU9zyXvA9c67eUd9tCVTk3O0zsww0Ds3b-jkbIoZ3x4h-Pnte55N7-EVPf_U0qnMZnYx4HeAayxvgWJnv8OPGDLM2NRHnGM2nlqTrAtxMvlgBjRF7yydTHAj5MX1mDwYjc_w5HCfkC9v31y171aXHy_et-eXKyuUkKvB1IBH1sxyAUYPQghQ3MJag7b92CgFALXmMJhB9b2wI2ej5lXF-3U9NuKEvFi82xS_FuzeTQ734b0JEEvuuFSyYnXT1Ig-_we9iSUFnA6pmslGV0og9XKh9gvLCcZum9xk0q6rWLfPt8N8u9_5IvvsYCz9BMNf8k-gCJwtwJ3zsPu_qbto20X5C9s3t08</recordid><startdate>202102</startdate><enddate>202102</enddate><creator>Lam, Kuen Kuen</creator><creator>Sethi, Raman</creator><creator>Tan, Grace</creator><creator>Tomar, Swati</creator><creator>Lo, Michelle</creator><creator>Loi, Carol</creator><creator>Tang, Choong Leong</creator><creator>Tan, Emile</creator><creator>Lai, Poh San</creator><creator>Cheah, Peh Yean</creator><general>John Wiley & Sons, Inc</general><general>Wiley Subscription Services, Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QP</scope><scope>7TM</scope><scope>7TO</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-0403-8703</orcidid><orcidid>https://orcid.org/0000-0002-2277-8783</orcidid><orcidid>https://orcid.org/0000-0003-3352-2000</orcidid></search><sort><creationdate>202102</creationdate><title>The orphan nuclear receptor NR0B2 could be a novel susceptibility locus associated with microsatellite‐stable, APC mutation‐negative early‐onset colorectal carcinomas with metabolic manifestation</title><author>Lam, Kuen Kuen ; Sethi, Raman ; Tan, Grace ; Tomar, Swati ; Lo, Michelle ; Loi, Carol ; Tang, Choong Leong ; Tan, Emile ; Lai, Poh San ; Cheah, Peh Yean</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3534-da7e7e7470c23ea9d333e52ce69e9cbf855eee792edad5bb3cf20f92112b67f83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2021</creationdate><topic>Adenomatous polyposis coli</topic><topic>Adenomatous Polyposis Coli Protein - genetics</topic><topic>Adult</topic><topic>Age of Onset</topic><topic>Apoptosis</topic><topic>Cancer</topic><topic>Carcinoma - genetics</topic><topic>Carcinoma - pathology</topic><topic>Colorectal cancer</topic><topic>Colorectal carcinoma</topic><topic>Colorectal Neoplasms - genetics</topic><topic>Colorectal Neoplasms - pathology</topic><topic>Diabetes mellitus</topic><topic>early‐onset colorectal cancer</topic><topic>Female</topic><topic>Frameshift mutation</topic><topic>frameshift variant</topic><topic>Genetic disorders</topic><topic>Haploinsufficiency</topic><topic>Humans</topic><topic>Male</topic><topic>Metabolism</topic><topic>Microsatellite Repeats - genetics</topic><topic>microsatellite‐stable</topic><topic>Middle Aged</topic><topic>Mucosa</topic><topic>Mutation</topic><topic>NR0B2</topic><topic>orphan nuclear receptor</topic><topic>Pedigree</topic><topic>Phenotypes</topic><topic>Polyposis</topic><topic>Polyps</topic><topic>Protein Binding</topic><topic>Proto-Oncogene Proteins c-bcl-2 - metabolism</topic><topic>Receptors, Cytoplasmic and Nuclear - genetics</topic><topic>Receptors, Cytoplasmic and Nuclear - metabolism</topic><topic>Retinoid X Receptor alpha - metabolism</topic><topic>Sequence analysis</topic><topic>Smad3 protein</topic><topic>Smad3 Protein - metabolism</topic><topic>Susceptibility</topic><topic>Tumors</topic><topic>Zinc Finger Protein GLI1 - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lam, Kuen Kuen</creatorcontrib><creatorcontrib>Sethi, Raman</creatorcontrib><creatorcontrib>Tan, Grace</creatorcontrib><creatorcontrib>Tomar, Swati</creatorcontrib><creatorcontrib>Lo, Michelle</creatorcontrib><creatorcontrib>Loi, Carol</creatorcontrib><creatorcontrib>Tang, Choong Leong</creatorcontrib><creatorcontrib>Tan, Emile</creatorcontrib><creatorcontrib>Lai, Poh San</creatorcontrib><creatorcontrib>Cheah, Peh Yean</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Genes chromosomes & cancer</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lam, Kuen Kuen</au><au>Sethi, Raman</au><au>Tan, Grace</au><au>Tomar, Swati</au><au>Lo, Michelle</au><au>Loi, Carol</au><au>Tang, Choong Leong</au><au>Tan, Emile</au><au>Lai, Poh San</au><au>Cheah, Peh Yean</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The orphan nuclear receptor NR0B2 could be a novel susceptibility locus associated with microsatellite‐stable, APC mutation‐negative early‐onset colorectal carcinomas with metabolic manifestation</atitle><jtitle>Genes chromosomes & cancer</jtitle><addtitle>Genes Chromosomes Cancer</addtitle><date>2021-02</date><risdate>2021</risdate><volume>60</volume><issue>2</issue><spage>61</spage><epage>72</epage><pages>61-72</pages><issn>1045-2257</issn><eissn>1098-2264</eissn><abstract>Colorectal cancer (CRC) is a high incidence cancer and major cause of cancer mortality. Though disease‐causing tumor suppressors for major syndromes are well characterized, about 10% of CRC is familial but without mutations in known tumor suppressors. We exhaustively screened 100 polyposis families for APC germline mutations and identified 13, which are APC mutation‐negative, microsatellite‐stable (MSS), and with undetectable mutation in known tumor suppressors. Whole exome sequencing in three probands uncovered two with germline frameshift NR0B2 mutations, c.293_301delTTGGGTTGGinsAC and c.227delT. Sanger Sequencing identified a third proband with NR0B2 c.157_166delCATCGCACCT frameshift mutation. All three mutations deleted the C‐terminus activation/repression domain of NR0B2, thus are loss‐of‐function mutations. Real‐time RT‐PCR performed on tumor and matched mucosa of one patient revealed that NR0B2 downstream targets, SMAD3 was derepressed while GLI1 was downregulated in the colonic mucosa compared to healthy controls. Truncated NR0B2 molecule was predicted to have weakened binding with interacting partners SMAD3, GLI1, BCL2, and RXRα, implying perturbation of TGF‐β, Hedgehog, anti‐apoptotic and nuclear hormone receptor signaling pathways. Immunostaining also revealed nuclear retention of the most severely truncated NR0B2 molecule compared to the wildtype. Microsatellite and sequencing analysis did not detect loss of wildtype allele in probands' tumors. The patient who acquired somatic KRAS mutation progressed rapidly whist the other two patients manifested with late‐onset obesity and diabetes. We propose that haploinsufficiency of NR0B2 is associated with a novel CRC syndrome with metabolic phenotypes.</abstract><cop>Hoboken, USA</cop><pub>John Wiley & Sons, Inc</pub><pmid>33094510</pmid><doi>10.1002/gcc.22904</doi><tpages>12</tpages><orcidid>https://orcid.org/0000-0003-0403-8703</orcidid><orcidid>https://orcid.org/0000-0002-2277-8783</orcidid><orcidid>https://orcid.org/0000-0003-3352-2000</orcidid></addata></record> |
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subjects | Adenomatous polyposis coli Adenomatous Polyposis Coli Protein - genetics Adult Age of Onset Apoptosis Cancer Carcinoma - genetics Carcinoma - pathology Colorectal cancer Colorectal carcinoma Colorectal Neoplasms - genetics Colorectal Neoplasms - pathology Diabetes mellitus early‐onset colorectal cancer Female Frameshift mutation frameshift variant Genetic disorders Haploinsufficiency Humans Male Metabolism Microsatellite Repeats - genetics microsatellite‐stable Middle Aged Mucosa Mutation NR0B2 orphan nuclear receptor Pedigree Phenotypes Polyposis Polyps Protein Binding Proto-Oncogene Proteins c-bcl-2 - metabolism Receptors, Cytoplasmic and Nuclear - genetics Receptors, Cytoplasmic and Nuclear - metabolism Retinoid X Receptor alpha - metabolism Sequence analysis Smad3 protein Smad3 Protein - metabolism Susceptibility Tumors Zinc Finger Protein GLI1 - metabolism |
title | The orphan nuclear receptor NR0B2 could be a novel susceptibility locus associated with microsatellite‐stable, APC mutation‐negative early‐onset colorectal carcinomas with metabolic manifestation |
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