A discovery of screening markers for rheumatoid arthritis by liquid chromatography mass spectrometry: A metabolomic approach
Aim This study aimed to discover serum metabolite biomarkers for potential use in screening for rheumatoid arthritis (RA). Methods The sera from 43 healthy controls (HCs) and 49 RA patients were globally analyzed using high‐performance liquid chromatography‐ tandem mass spectrometry. Molecular featu...
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Veröffentlicht in: | International journal of rheumatic diseases 2020-10, Vol.23 (10), p.1353-1362 |
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container_title | International journal of rheumatic diseases |
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creator | Lee, Yoo‐Jin Mun, Sora Lee, You‐Rim Lee, Seungyeon Kwon, Sohyen Kim, Doojin Lim, Mi‐Kyoung Kang, Hee‐Gyoo Lee, Jiyeong |
description | Aim
This study aimed to discover serum metabolite biomarkers for potential use in screening for rheumatoid arthritis (RA).
Methods
The sera from 43 healthy controls (HCs) and 49 RA patients were globally analyzed using high‐performance liquid chromatography‐ tandem mass spectrometry. Molecular features (MFs) from samples were analyzed using volcano plots, partial least squares discriminant analysis, and variable importance in projection scores to select candidates. The spectra of candidate MFs were matched with the METLIN database. We confirmed the association between candidates and RA and analyzed the receiver‐operating characteristic (ROC) curves.
Results
We selected a total of 57 candidate MFs that had a fold change ≥1.5, P value ≤.05, and over 80% of frequency. Among them, 18 MFs were identified as metabolites with the METLIN database. Six metabolites (dehydroepiandrosterone sulfate, androsterone sulfate, γ‐linolenic acid, 9[E],11[E]‐conjugated linoleic acid, docosahexaenoic acid, and docosapentaenoic acid [22n‐3]) out of the 18 were associated with mechanisms of RA and were selected as final candidates. ROC curve analysis revealed their area under the curve (AUC) values were all above 0.75 and the combined AUC of the six candidates was 0.89.
Conclusion
Using six candidates as a marker set showed potential in distinguishing RA patients from HCs, based on high AUC values. Therefore, we propose that a marker set of these six candidates has potential clinical application in RA screening. |
doi_str_mv | 10.1111/1756-185X.13935 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_2437396783</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2451281648</sourcerecordid><originalsourceid>FETCH-LOGICAL-c3715-8f50015410ac566c614f1b600c14ccaf31dc509c808d2ac67f7d36fae95c996b3</originalsourceid><addsrcrecordid>eNqFkU1P3DAQhq2qqMC2594qS71wWfCsYyfpbYXKh7QSHKjUm-VM7I1psg52QhWJH4-XhT1wwRePxs-845mXkO_ATiGdM8iFnEMh_p4CL7n4RI72mc_7OINDchzjPWMSuMy_kEO-KDLByuyIPC1p7SL6RxMm6i2NGIzZuM2adjr8MyFS6wMNjRk7PXhXUx2GJrjBRVpNtHUPY8phE_z2eR1030ypMkYae4NDSpshTL_okqZAV771nUOq-z54jc1XcmB1G82313tG_lz8vju_mq9uLq_Pl6s58hzEvLCCMRAZMI1CSpSQWagkYwgZorYcakzTYMGKeqFR5javubTalALLUlZ8Rk52uqntw2jioLo0s2lbvTF-jGqR8ZyXMi94Qn--Q-_9GDbpd4kSsChAZkWiznYUBh9jMFb1waWFTQqY2hqjtqtXWxvUizGp4ser7lh1pt7zb04kQOyA_64100d6anm72gk_A3Ppmek</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2451281648</pqid></control><display><type>article</type><title>A discovery of screening markers for rheumatoid arthritis by liquid chromatography mass spectrometry: A metabolomic approach</title><source>Wiley Online Library All Journals</source><creator>Lee, Yoo‐Jin ; Mun, Sora ; Lee, You‐Rim ; Lee, Seungyeon ; Kwon, Sohyen ; Kim, Doojin ; Lim, Mi‐Kyoung ; Kang, Hee‐Gyoo ; Lee, Jiyeong</creator><creatorcontrib>Lee, Yoo‐Jin ; Mun, Sora ; Lee, You‐Rim ; Lee, Seungyeon ; Kwon, Sohyen ; Kim, Doojin ; Lim, Mi‐Kyoung ; Kang, Hee‐Gyoo ; Lee, Jiyeong</creatorcontrib><description>Aim
This study aimed to discover serum metabolite biomarkers for potential use in screening for rheumatoid arthritis (RA).
Methods
The sera from 43 healthy controls (HCs) and 49 RA patients were globally analyzed using high‐performance liquid chromatography‐ tandem mass spectrometry. Molecular features (MFs) from samples were analyzed using volcano plots, partial least squares discriminant analysis, and variable importance in projection scores to select candidates. The spectra of candidate MFs were matched with the METLIN database. We confirmed the association between candidates and RA and analyzed the receiver‐operating characteristic (ROC) curves.
Results
We selected a total of 57 candidate MFs that had a fold change ≥1.5, P value ≤.05, and over 80% of frequency. Among them, 18 MFs were identified as metabolites with the METLIN database. Six metabolites (dehydroepiandrosterone sulfate, androsterone sulfate, γ‐linolenic acid, 9[E],11[E]‐conjugated linoleic acid, docosahexaenoic acid, and docosapentaenoic acid [22n‐3]) out of the 18 were associated with mechanisms of RA and were selected as final candidates. ROC curve analysis revealed their area under the curve (AUC) values were all above 0.75 and the combined AUC of the six candidates was 0.89.
Conclusion
Using six candidates as a marker set showed potential in distinguishing RA patients from HCs, based on high AUC values. Therefore, we propose that a marker set of these six candidates has potential clinical application in RA screening.</description><identifier>ISSN: 1756-1841</identifier><identifier>EISSN: 1756-185X</identifier><identifier>DOI: 10.1111/1756-185X.13935</identifier><identifier>PMID: 32845094</identifier><language>eng</language><publisher>England: Wiley Subscription Services, Inc</publisher><subject>Acids ; biological markers ; Candidates ; Chromatography ; Dehydroepiandrosterone ; Dehydroepiandrosterone sulfate ; Discriminant analysis ; Docosahexaenoic acid ; Linoleic acid ; Linolenic acid ; Liquid chromatography ; Mass spectrometry ; Mass spectroscopy ; Metabolites ; Metabolomics ; Rheumatoid arthritis ; Scientific imaging ; tandem mass spectrometry</subject><ispartof>International journal of rheumatic diseases, 2020-10, Vol.23 (10), p.1353-1362</ispartof><rights>2020 Asia Pacific League of Associations for Rheumatology and John Wiley & Sons Australia, Ltd</rights><rights>2020 Asia Pacific League of Associations for Rheumatology and John Wiley & Sons Australia, Ltd.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3715-8f50015410ac566c614f1b600c14ccaf31dc509c808d2ac67f7d36fae95c996b3</citedby><cites>FETCH-LOGICAL-c3715-8f50015410ac566c614f1b600c14ccaf31dc509c808d2ac67f7d36fae95c996b3</cites><orcidid>0000-0001-8690-2483 ; 0000-0002-1245-518X ; 0000-0002-1987-4109</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2F1756-185X.13935$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2F1756-185X.13935$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1417,27924,27925,45574,45575</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32845094$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lee, Yoo‐Jin</creatorcontrib><creatorcontrib>Mun, Sora</creatorcontrib><creatorcontrib>Lee, You‐Rim</creatorcontrib><creatorcontrib>Lee, Seungyeon</creatorcontrib><creatorcontrib>Kwon, Sohyen</creatorcontrib><creatorcontrib>Kim, Doojin</creatorcontrib><creatorcontrib>Lim, Mi‐Kyoung</creatorcontrib><creatorcontrib>Kang, Hee‐Gyoo</creatorcontrib><creatorcontrib>Lee, Jiyeong</creatorcontrib><title>A discovery of screening markers for rheumatoid arthritis by liquid chromatography mass spectrometry: A metabolomic approach</title><title>International journal of rheumatic diseases</title><addtitle>Int J Rheum Dis</addtitle><description>Aim
This study aimed to discover serum metabolite biomarkers for potential use in screening for rheumatoid arthritis (RA).
Methods
The sera from 43 healthy controls (HCs) and 49 RA patients were globally analyzed using high‐performance liquid chromatography‐ tandem mass spectrometry. Molecular features (MFs) from samples were analyzed using volcano plots, partial least squares discriminant analysis, and variable importance in projection scores to select candidates. The spectra of candidate MFs were matched with the METLIN database. We confirmed the association between candidates and RA and analyzed the receiver‐operating characteristic (ROC) curves.
Results
We selected a total of 57 candidate MFs that had a fold change ≥1.5, P value ≤.05, and over 80% of frequency. Among them, 18 MFs were identified as metabolites with the METLIN database. Six metabolites (dehydroepiandrosterone sulfate, androsterone sulfate, γ‐linolenic acid, 9[E],11[E]‐conjugated linoleic acid, docosahexaenoic acid, and docosapentaenoic acid [22n‐3]) out of the 18 were associated with mechanisms of RA and were selected as final candidates. ROC curve analysis revealed their area under the curve (AUC) values were all above 0.75 and the combined AUC of the six candidates was 0.89.
Conclusion
Using six candidates as a marker set showed potential in distinguishing RA patients from HCs, based on high AUC values. Therefore, we propose that a marker set of these six candidates has potential clinical application in RA screening.</description><subject>Acids</subject><subject>biological markers</subject><subject>Candidates</subject><subject>Chromatography</subject><subject>Dehydroepiandrosterone</subject><subject>Dehydroepiandrosterone sulfate</subject><subject>Discriminant analysis</subject><subject>Docosahexaenoic acid</subject><subject>Linoleic acid</subject><subject>Linolenic acid</subject><subject>Liquid chromatography</subject><subject>Mass spectrometry</subject><subject>Mass spectroscopy</subject><subject>Metabolites</subject><subject>Metabolomics</subject><subject>Rheumatoid arthritis</subject><subject>Scientific imaging</subject><subject>tandem mass spectrometry</subject><issn>1756-1841</issn><issn>1756-185X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNqFkU1P3DAQhq2qqMC2594qS71wWfCsYyfpbYXKh7QSHKjUm-VM7I1psg52QhWJH4-XhT1wwRePxs-845mXkO_ATiGdM8iFnEMh_p4CL7n4RI72mc_7OINDchzjPWMSuMy_kEO-KDLByuyIPC1p7SL6RxMm6i2NGIzZuM2adjr8MyFS6wMNjRk7PXhXUx2GJrjBRVpNtHUPY8phE_z2eR1030ypMkYae4NDSpshTL_okqZAV771nUOq-z54jc1XcmB1G82313tG_lz8vju_mq9uLq_Pl6s58hzEvLCCMRAZMI1CSpSQWagkYwgZorYcakzTYMGKeqFR5javubTalALLUlZ8Rk52uqntw2jioLo0s2lbvTF-jGqR8ZyXMi94Qn--Q-_9GDbpd4kSsChAZkWiznYUBh9jMFb1waWFTQqY2hqjtqtXWxvUizGp4ser7lh1pt7zb04kQOyA_64100d6anm72gk_A3Ppmek</recordid><startdate>202010</startdate><enddate>202010</enddate><creator>Lee, Yoo‐Jin</creator><creator>Mun, Sora</creator><creator>Lee, You‐Rim</creator><creator>Lee, Seungyeon</creator><creator>Kwon, Sohyen</creator><creator>Kim, Doojin</creator><creator>Lim, Mi‐Kyoung</creator><creator>Kang, Hee‐Gyoo</creator><creator>Lee, Jiyeong</creator><general>Wiley Subscription Services, Inc</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QP</scope><scope>7T5</scope><scope>H94</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0001-8690-2483</orcidid><orcidid>https://orcid.org/0000-0002-1245-518X</orcidid><orcidid>https://orcid.org/0000-0002-1987-4109</orcidid></search><sort><creationdate>202010</creationdate><title>A discovery of screening markers for rheumatoid arthritis by liquid chromatography mass spectrometry: A metabolomic approach</title><author>Lee, Yoo‐Jin ; Mun, Sora ; Lee, You‐Rim ; Lee, Seungyeon ; Kwon, Sohyen ; Kim, Doojin ; Lim, Mi‐Kyoung ; Kang, Hee‐Gyoo ; Lee, Jiyeong</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3715-8f50015410ac566c614f1b600c14ccaf31dc509c808d2ac67f7d36fae95c996b3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Acids</topic><topic>biological markers</topic><topic>Candidates</topic><topic>Chromatography</topic><topic>Dehydroepiandrosterone</topic><topic>Dehydroepiandrosterone sulfate</topic><topic>Discriminant analysis</topic><topic>Docosahexaenoic acid</topic><topic>Linoleic acid</topic><topic>Linolenic acid</topic><topic>Liquid chromatography</topic><topic>Mass spectrometry</topic><topic>Mass spectroscopy</topic><topic>Metabolites</topic><topic>Metabolomics</topic><topic>Rheumatoid arthritis</topic><topic>Scientific imaging</topic><topic>tandem mass spectrometry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, Yoo‐Jin</creatorcontrib><creatorcontrib>Mun, Sora</creatorcontrib><creatorcontrib>Lee, You‐Rim</creatorcontrib><creatorcontrib>Lee, Seungyeon</creatorcontrib><creatorcontrib>Kwon, Sohyen</creatorcontrib><creatorcontrib>Kim, Doojin</creatorcontrib><creatorcontrib>Lim, Mi‐Kyoung</creatorcontrib><creatorcontrib>Kang, Hee‐Gyoo</creatorcontrib><creatorcontrib>Lee, Jiyeong</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Immunology Abstracts</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of rheumatic diseases</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, Yoo‐Jin</au><au>Mun, Sora</au><au>Lee, You‐Rim</au><au>Lee, Seungyeon</au><au>Kwon, Sohyen</au><au>Kim, Doojin</au><au>Lim, Mi‐Kyoung</au><au>Kang, Hee‐Gyoo</au><au>Lee, Jiyeong</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A discovery of screening markers for rheumatoid arthritis by liquid chromatography mass spectrometry: A metabolomic approach</atitle><jtitle>International journal of rheumatic diseases</jtitle><addtitle>Int J Rheum Dis</addtitle><date>2020-10</date><risdate>2020</risdate><volume>23</volume><issue>10</issue><spage>1353</spage><epage>1362</epage><pages>1353-1362</pages><issn>1756-1841</issn><eissn>1756-185X</eissn><abstract>Aim
This study aimed to discover serum metabolite biomarkers for potential use in screening for rheumatoid arthritis (RA).
Methods
The sera from 43 healthy controls (HCs) and 49 RA patients were globally analyzed using high‐performance liquid chromatography‐ tandem mass spectrometry. Molecular features (MFs) from samples were analyzed using volcano plots, partial least squares discriminant analysis, and variable importance in projection scores to select candidates. The spectra of candidate MFs were matched with the METLIN database. We confirmed the association between candidates and RA and analyzed the receiver‐operating characteristic (ROC) curves.
Results
We selected a total of 57 candidate MFs that had a fold change ≥1.5, P value ≤.05, and over 80% of frequency. Among them, 18 MFs were identified as metabolites with the METLIN database. Six metabolites (dehydroepiandrosterone sulfate, androsterone sulfate, γ‐linolenic acid, 9[E],11[E]‐conjugated linoleic acid, docosahexaenoic acid, and docosapentaenoic acid [22n‐3]) out of the 18 were associated with mechanisms of RA and were selected as final candidates. ROC curve analysis revealed their area under the curve (AUC) values were all above 0.75 and the combined AUC of the six candidates was 0.89.
Conclusion
Using six candidates as a marker set showed potential in distinguishing RA patients from HCs, based on high AUC values. Therefore, we propose that a marker set of these six candidates has potential clinical application in RA screening.</abstract><cop>England</cop><pub>Wiley Subscription Services, Inc</pub><pmid>32845094</pmid><doi>10.1111/1756-185X.13935</doi><tpages>10</tpages><orcidid>https://orcid.org/0000-0001-8690-2483</orcidid><orcidid>https://orcid.org/0000-0002-1245-518X</orcidid><orcidid>https://orcid.org/0000-0002-1987-4109</orcidid></addata></record> |
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subjects | Acids biological markers Candidates Chromatography Dehydroepiandrosterone Dehydroepiandrosterone sulfate Discriminant analysis Docosahexaenoic acid Linoleic acid Linolenic acid Liquid chromatography Mass spectrometry Mass spectroscopy Metabolites Metabolomics Rheumatoid arthritis Scientific imaging tandem mass spectrometry |
title | A discovery of screening markers for rheumatoid arthritis by liquid chromatography mass spectrometry: A metabolomic approach |
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