Harnessing the sponge microbiome for industrial biocatalysts
Within the marine sphere, host-associated microbiomes are receiving growing attention as prolific sources of novel biocatalysts. Given the known biocatalytic potential of poriferan microbial inhabitants, this review focuses on enzymes from the sponge microbiome, with special attention on their relev...
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description | Within the marine sphere, host-associated microbiomes are receiving growing attention as prolific sources of novel biocatalysts. Given the known biocatalytic potential of poriferan microbial inhabitants, this review focuses on enzymes from the sponge microbiome, with special attention on their relevant properties and the wide range of their potential biotechnological applications within various industries. Cultivable bacterial and filamentous fungal isolates account for the majority of the enzymatic sources. Hydrolases, mainly glycoside hydrolases and carboxylesterases, are the predominant reported group of enzymes, with varying degrees of tolerance to alkaline pH and growing salt concentrations being common. Prospective areas for the application of these microbial enzymes include biorefinery, detergent, food and effluent treatment industries. Finally, alternative strategies to identify novel biocatalysts from the sponge microbiome are addressed, with an emphasis on modern -omics-based approaches that are currently available in the enzyme research arena. By providing this current overview of the field, we hope to not only increase the appetite of researchers to instigate forthcoming studies but also to stress how basic and applied research can pave the way for new biocatalysts from these symbiotic microbial communities in a productive fashion.
Key points
• The sponge microbiome is a burgeoning source of industrial biocatalysts.
• Sponge microbial enzymes have useful habitat-related traits for several industries.
• Strategies are provided for the future discovery of microbial enzymes from sponges. |
doi_str_mv | 10.1007/s00253-020-10817-3 |
format | Article |
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Key points
• The sponge microbiome is a burgeoning source of industrial biocatalysts.
• Sponge microbial enzymes have useful habitat-related traits for several industries.
• Strategies are provided for the future discovery of microbial enzymes from sponges.</description><identifier>ISSN: 0175-7598</identifier><identifier>EISSN: 1432-0614</identifier><identifier>DOI: 10.1007/s00253-020-10817-3</identifier><identifier>PMID: 32827049</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Appetite ; Bacteria - genetics ; Biocatalysts ; Biomedical and Life Sciences ; Biorefineries ; Biotechnology ; Effluent treatment ; Enzymes ; Food industry ; Fungi ; Glycosidases ; Glycoside hydrolase ; Hydrolases ; Life Sciences ; Microbial activity ; Microbial Genetics and Genomics ; Microbiology ; Microbiomes ; Microbiota ; Microorganisms ; Mini-Review ; Prospective Studies ; Wastewater treatment</subject><ispartof>Applied microbiology and biotechnology, 2020-10, Vol.104 (19), p.8131-8154</ispartof><rights>Springer-Verlag GmbH Germany, part of Springer Nature 2020</rights><rights>COPYRIGHT 2020 Springer</rights><rights>Springer-Verlag GmbH Germany, part of Springer Nature 2020.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c513t-71fd9fd52b555b38ad9b512f7e1a2e5382e9f8131efaa8b9eaa1bea7476c1bba3</citedby><cites>FETCH-LOGICAL-c513t-71fd9fd52b555b38ad9b512f7e1a2e5382e9f8131efaa8b9eaa1bea7476c1bba3</cites><orcidid>0000-0002-9140-2800 ; 0000-0002-7713-5574 ; 0000-0001-5252-0671 ; 0000-0001-6029-3608</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00253-020-10817-3$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00253-020-10817-3$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27903,27904,41467,42536,51297</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32827049$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>de Oliveira, Bruno Francesco Rodrigues</creatorcontrib><creatorcontrib>Carr, Clodagh M.</creatorcontrib><creatorcontrib>Dobson, Alan D. W.</creatorcontrib><creatorcontrib>Laport, Marinella Silva</creatorcontrib><title>Harnessing the sponge microbiome for industrial biocatalysts</title><title>Applied microbiology and biotechnology</title><addtitle>Appl Microbiol Biotechnol</addtitle><addtitle>Appl Microbiol Biotechnol</addtitle><description>Within the marine sphere, host-associated microbiomes are receiving growing attention as prolific sources of novel biocatalysts. Given the known biocatalytic potential of poriferan microbial inhabitants, this review focuses on enzymes from the sponge microbiome, with special attention on their relevant properties and the wide range of their potential biotechnological applications within various industries. Cultivable bacterial and filamentous fungal isolates account for the majority of the enzymatic sources. Hydrolases, mainly glycoside hydrolases and carboxylesterases, are the predominant reported group of enzymes, with varying degrees of tolerance to alkaline pH and growing salt concentrations being common. Prospective areas for the application of these microbial enzymes include biorefinery, detergent, food and effluent treatment industries. Finally, alternative strategies to identify novel biocatalysts from the sponge microbiome are addressed, with an emphasis on modern -omics-based approaches that are currently available in the enzyme research arena. By providing this current overview of the field, we hope to not only increase the appetite of researchers to instigate forthcoming studies but also to stress how basic and applied research can pave the way for new biocatalysts from these symbiotic microbial communities in a productive fashion.
Key points
• The sponge microbiome is a burgeoning source of industrial biocatalysts.
• Sponge microbial enzymes have useful habitat-related traits for several industries.
• Strategies are provided for the future discovery of microbial enzymes from sponges.</description><subject>Appetite</subject><subject>Bacteria - genetics</subject><subject>Biocatalysts</subject><subject>Biomedical and Life Sciences</subject><subject>Biorefineries</subject><subject>Biotechnology</subject><subject>Effluent treatment</subject><subject>Enzymes</subject><subject>Food industry</subject><subject>Fungi</subject><subject>Glycosidases</subject><subject>Glycoside hydrolase</subject><subject>Hydrolases</subject><subject>Life Sciences</subject><subject>Microbial activity</subject><subject>Microbial Genetics and Genomics</subject><subject>Microbiology</subject><subject>Microbiomes</subject><subject>Microbiota</subject><subject>Microorganisms</subject><subject>Mini-Review</subject><subject>Prospective Studies</subject><subject>Wastewater treatment</subject><issn>0175-7598</issn><issn>1432-0614</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kU2LFDEQhoMo7rj6BzxIgxc99JqPTtIBL8ui7sKC4Mc5VLorY5buzpikwf33ZpzVZUSkDgWV531J1UvIc0bPGKX6TaaUS9FSTltGe6Zb8YBsWCd4SxXrHpINZVq2Wpr-hDzJ-YZSxnulHpMTwXuuaWc25O0lpAVzDsu2Kd-wybu4bLGZw5CiC3HGxsfUhGVcc0kBpqYOBygw3eaSn5JHHqaMz-76Kfn6_t2Xi8v2-uOHq4vz63aQTJRWMz8aP0rupJRO9DAaJxn3GhlwlKLnaHzPBEMP0DuDAMwh6E6rgTkH4pS8OvjuUvy-Yi52DnnAaYIF45ot74QSxnSSV_TlX-hNXNNSf7enjFZUU3NPbWFCGxYfS4Jhb2rPleg6pQzfe539g6o1Yr1PXNCHOj8SvD4SVKbgj7KFNWd79fnTMcsPbD10zgm93aUwQ7q1jNp9vPYQr63x2l_xWlFFL-62W92M4x_J7zwrIA5Ark81yHS__n9sfwIbm612</recordid><startdate>20201001</startdate><enddate>20201001</enddate><creator>de Oliveira, Bruno Francesco Rodrigues</creator><creator>Carr, Clodagh M.</creator><creator>Dobson, Alan D. 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W.</au><au>Laport, Marinella Silva</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Harnessing the sponge microbiome for industrial biocatalysts</atitle><jtitle>Applied microbiology and biotechnology</jtitle><stitle>Appl Microbiol Biotechnol</stitle><addtitle>Appl Microbiol Biotechnol</addtitle><date>2020-10-01</date><risdate>2020</risdate><volume>104</volume><issue>19</issue><spage>8131</spage><epage>8154</epage><pages>8131-8154</pages><issn>0175-7598</issn><eissn>1432-0614</eissn><abstract>Within the marine sphere, host-associated microbiomes are receiving growing attention as prolific sources of novel biocatalysts. Given the known biocatalytic potential of poriferan microbial inhabitants, this review focuses on enzymes from the sponge microbiome, with special attention on their relevant properties and the wide range of their potential biotechnological applications within various industries. Cultivable bacterial and filamentous fungal isolates account for the majority of the enzymatic sources. Hydrolases, mainly glycoside hydrolases and carboxylesterases, are the predominant reported group of enzymes, with varying degrees of tolerance to alkaline pH and growing salt concentrations being common. Prospective areas for the application of these microbial enzymes include biorefinery, detergent, food and effluent treatment industries. Finally, alternative strategies to identify novel biocatalysts from the sponge microbiome are addressed, with an emphasis on modern -omics-based approaches that are currently available in the enzyme research arena. By providing this current overview of the field, we hope to not only increase the appetite of researchers to instigate forthcoming studies but also to stress how basic and applied research can pave the way for new biocatalysts from these symbiotic microbial communities in a productive fashion.
Key points
• The sponge microbiome is a burgeoning source of industrial biocatalysts.
• Sponge microbial enzymes have useful habitat-related traits for several industries.
• Strategies are provided for the future discovery of microbial enzymes from sponges.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>32827049</pmid><doi>10.1007/s00253-020-10817-3</doi><tpages>24</tpages><orcidid>https://orcid.org/0000-0002-9140-2800</orcidid><orcidid>https://orcid.org/0000-0002-7713-5574</orcidid><orcidid>https://orcid.org/0000-0001-5252-0671</orcidid><orcidid>https://orcid.org/0000-0001-6029-3608</orcidid></addata></record> |
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subjects | Appetite Bacteria - genetics Biocatalysts Biomedical and Life Sciences Biorefineries Biotechnology Effluent treatment Enzymes Food industry Fungi Glycosidases Glycoside hydrolase Hydrolases Life Sciences Microbial activity Microbial Genetics and Genomics Microbiology Microbiomes Microbiota Microorganisms Mini-Review Prospective Studies Wastewater treatment |
title | Harnessing the sponge microbiome for industrial biocatalysts |
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