Fast and reliable detection of carbapenemase genes in various Gram negatives using a new commercially available fluorescence-based real-time polymerase chain reaction platform
The Revogene® Carba C assay is a real-time polymerase chain reaction–based assay that runs on the microfluidic Revogene platform. It was recently designed for the detection of genes encoding the 5 major carbapenemases (NDM, VIM, IMP, KPC, and OXA-48) from various Gram-negatives. A total of 145 clini...
Gespeichert in:
Veröffentlicht in: | Diagnostic microbiology and infectious disease 2020-11, Vol.98 (3), p.115127-115127, Article 115127 |
---|---|
Hauptverfasser: | , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 115127 |
---|---|
container_issue | 3 |
container_start_page | 115127 |
container_title | Diagnostic microbiology and infectious disease |
container_volume | 98 |
creator | Sadek, Mustafa Demord, Anthony Poirel, Laurent Nordmann, Patrice |
description | The Revogene® Carba C assay is a real-time polymerase chain reaction–based assay that runs on the microfluidic Revogene platform. It was recently designed for the detection of genes encoding the 5 major carbapenemases (NDM, VIM, IMP, KPC, and OXA-48) from various Gram-negatives. A total of 145 clinical Gram-negative strains (96 carbapenemase producers and 49 non–carbapenemase producers) were tested. The overall sensitivity and specificity were 100%. All strains co-producing double carbapenemases have been correctly detected. All non–carbapenemase producers and nontargeted carbapenemase producers gave a negative result. The sample preparation was easy to handle, taking around 5 to 10 min per isolate, with a run time of approximately 70 min. This assay is a rapid, easy-to-perform, reliable tool to detect the most common carbapenemases, with excellent sensitivity and specificity regardless of the host bacteria. Given its user friendliness, simplicity, and short time to result, the Revogene® Carba C assay is suitable for microbiology laboratories. |
doi_str_mv | 10.1016/j.diagmicrobio.2020.115127 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_2429787244</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S0732889320305046</els_id><sourcerecordid>2429787244</sourcerecordid><originalsourceid>FETCH-LOGICAL-c409t-5b70fefe7d4a93398c885cb2f7989985b67133f3496a879b205a6304c7fba6b23</originalsourceid><addsrcrecordid>eNqNUcuO1DAQtFYg7bDwDxYnLhkcO4ljbmhhH9JKXOBstZ324JETBzszaL6KX8Qhe9gjJ7dcXVXdXYS8r9m-ZnX38bgfPBxGb1M0Pu454wWo25rLK7Kre6kqxiR7RXZMCl71vRLX5E3OR8Zqrhq2I3_uIC8UpoEmDB5MQDrggnbxcaLRUQvJwIwTjpCRHkqRqZ_oGZKPp0zvE4x0wgMs_lyQU_bTgUL5-U1tHEdM1kMIFwpn8OGfugunmDBbnCxWpoiuzhCqxY9I5xguhbRa2Z9QfAq0jTIHWFxM41vy2kHI-O75vSE_7r5-v32onr7dP95-fqpsw9RStUYyhw7l0IASQvW271truJOqV6pvTSdrIZxoVAflSoazFjrBGiudgc5wcUM-bLpzir9OmBc9-jJ0CDBhWVzzhivZS940pfXT1lpCyDmh03PyI6SLrpleU9JH_TIlvaakt5QK-ctGxrLM2WPS2fr1NoNPJQU9RP8_Mn8BI7amiQ</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2429787244</pqid></control><display><type>article</type><title>Fast and reliable detection of carbapenemase genes in various Gram negatives using a new commercially available fluorescence-based real-time polymerase chain reaction platform</title><source>Elsevier ScienceDirect Journals</source><creator>Sadek, Mustafa ; Demord, Anthony ; Poirel, Laurent ; Nordmann, Patrice</creator><creatorcontrib>Sadek, Mustafa ; Demord, Anthony ; Poirel, Laurent ; Nordmann, Patrice</creatorcontrib><description>The Revogene® Carba C assay is a real-time polymerase chain reaction–based assay that runs on the microfluidic Revogene platform. It was recently designed for the detection of genes encoding the 5 major carbapenemases (NDM, VIM, IMP, KPC, and OXA-48) from various Gram-negatives. A total of 145 clinical Gram-negative strains (96 carbapenemase producers and 49 non–carbapenemase producers) were tested. The overall sensitivity and specificity were 100%. All strains co-producing double carbapenemases have been correctly detected. All non–carbapenemase producers and nontargeted carbapenemase producers gave a negative result. The sample preparation was easy to handle, taking around 5 to 10 min per isolate, with a run time of approximately 70 min. This assay is a rapid, easy-to-perform, reliable tool to detect the most common carbapenemases, with excellent sensitivity and specificity regardless of the host bacteria. Given its user friendliness, simplicity, and short time to result, the Revogene® Carba C assay is suitable for microbiology laboratories.</description><identifier>ISSN: 0732-8893</identifier><identifier>EISSN: 1879-0070</identifier><identifier>DOI: 10.1016/j.diagmicrobio.2020.115127</identifier><language>eng</language><publisher>Elsevier Inc</publisher><subject>Carbapenemase ; Gram-negatives ; Rapid diagnostics ; Real-time PCR</subject><ispartof>Diagnostic microbiology and infectious disease, 2020-11, Vol.98 (3), p.115127-115127, Article 115127</ispartof><rights>2020 The Authors</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c409t-5b70fefe7d4a93398c885cb2f7989985b67133f3496a879b205a6304c7fba6b23</citedby><cites>FETCH-LOGICAL-c409t-5b70fefe7d4a93398c885cb2f7989985b67133f3496a879b205a6304c7fba6b23</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0732889320305046$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids></links><search><creatorcontrib>Sadek, Mustafa</creatorcontrib><creatorcontrib>Demord, Anthony</creatorcontrib><creatorcontrib>Poirel, Laurent</creatorcontrib><creatorcontrib>Nordmann, Patrice</creatorcontrib><title>Fast and reliable detection of carbapenemase genes in various Gram negatives using a new commercially available fluorescence-based real-time polymerase chain reaction platform</title><title>Diagnostic microbiology and infectious disease</title><description>The Revogene® Carba C assay is a real-time polymerase chain reaction–based assay that runs on the microfluidic Revogene platform. It was recently designed for the detection of genes encoding the 5 major carbapenemases (NDM, VIM, IMP, KPC, and OXA-48) from various Gram-negatives. A total of 145 clinical Gram-negative strains (96 carbapenemase producers and 49 non–carbapenemase producers) were tested. The overall sensitivity and specificity were 100%. All strains co-producing double carbapenemases have been correctly detected. All non–carbapenemase producers and nontargeted carbapenemase producers gave a negative result. The sample preparation was easy to handle, taking around 5 to 10 min per isolate, with a run time of approximately 70 min. This assay is a rapid, easy-to-perform, reliable tool to detect the most common carbapenemases, with excellent sensitivity and specificity regardless of the host bacteria. Given its user friendliness, simplicity, and short time to result, the Revogene® Carba C assay is suitable for microbiology laboratories.</description><subject>Carbapenemase</subject><subject>Gram-negatives</subject><subject>Rapid diagnostics</subject><subject>Real-time PCR</subject><issn>0732-8893</issn><issn>1879-0070</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNqNUcuO1DAQtFYg7bDwDxYnLhkcO4ljbmhhH9JKXOBstZ324JETBzszaL6KX8Qhe9gjJ7dcXVXdXYS8r9m-ZnX38bgfPBxGb1M0Pu454wWo25rLK7Kre6kqxiR7RXZMCl71vRLX5E3OR8Zqrhq2I3_uIC8UpoEmDB5MQDrggnbxcaLRUQvJwIwTjpCRHkqRqZ_oGZKPp0zvE4x0wgMs_lyQU_bTgUL5-U1tHEdM1kMIFwpn8OGfugunmDBbnCxWpoiuzhCqxY9I5xguhbRa2Z9QfAq0jTIHWFxM41vy2kHI-O75vSE_7r5-v32onr7dP95-fqpsw9RStUYyhw7l0IASQvW271truJOqV6pvTSdrIZxoVAflSoazFjrBGiudgc5wcUM-bLpzir9OmBc9-jJ0CDBhWVzzhivZS940pfXT1lpCyDmh03PyI6SLrpleU9JH_TIlvaakt5QK-ctGxrLM2WPS2fr1NoNPJQU9RP8_Mn8BI7amiQ</recordid><startdate>202011</startdate><enddate>202011</enddate><creator>Sadek, Mustafa</creator><creator>Demord, Anthony</creator><creator>Poirel, Laurent</creator><creator>Nordmann, Patrice</creator><general>Elsevier Inc</general><scope>6I.</scope><scope>AAFTH</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>202011</creationdate><title>Fast and reliable detection of carbapenemase genes in various Gram negatives using a new commercially available fluorescence-based real-time polymerase chain reaction platform</title><author>Sadek, Mustafa ; Demord, Anthony ; Poirel, Laurent ; Nordmann, Patrice</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c409t-5b70fefe7d4a93398c885cb2f7989985b67133f3496a879b205a6304c7fba6b23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Carbapenemase</topic><topic>Gram-negatives</topic><topic>Rapid diagnostics</topic><topic>Real-time PCR</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sadek, Mustafa</creatorcontrib><creatorcontrib>Demord, Anthony</creatorcontrib><creatorcontrib>Poirel, Laurent</creatorcontrib><creatorcontrib>Nordmann, Patrice</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Diagnostic microbiology and infectious disease</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sadek, Mustafa</au><au>Demord, Anthony</au><au>Poirel, Laurent</au><au>Nordmann, Patrice</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Fast and reliable detection of carbapenemase genes in various Gram negatives using a new commercially available fluorescence-based real-time polymerase chain reaction platform</atitle><jtitle>Diagnostic microbiology and infectious disease</jtitle><date>2020-11</date><risdate>2020</risdate><volume>98</volume><issue>3</issue><spage>115127</spage><epage>115127</epage><pages>115127-115127</pages><artnum>115127</artnum><issn>0732-8893</issn><eissn>1879-0070</eissn><abstract>The Revogene® Carba C assay is a real-time polymerase chain reaction–based assay that runs on the microfluidic Revogene platform. It was recently designed for the detection of genes encoding the 5 major carbapenemases (NDM, VIM, IMP, KPC, and OXA-48) from various Gram-negatives. A total of 145 clinical Gram-negative strains (96 carbapenemase producers and 49 non–carbapenemase producers) were tested. The overall sensitivity and specificity were 100%. All strains co-producing double carbapenemases have been correctly detected. All non–carbapenemase producers and nontargeted carbapenemase producers gave a negative result. The sample preparation was easy to handle, taking around 5 to 10 min per isolate, with a run time of approximately 70 min. This assay is a rapid, easy-to-perform, reliable tool to detect the most common carbapenemases, with excellent sensitivity and specificity regardless of the host bacteria. Given its user friendliness, simplicity, and short time to result, the Revogene® Carba C assay is suitable for microbiology laboratories.</abstract><pub>Elsevier Inc</pub><doi>10.1016/j.diagmicrobio.2020.115127</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0732-8893 |
ispartof | Diagnostic microbiology and infectious disease, 2020-11, Vol.98 (3), p.115127-115127, Article 115127 |
issn | 0732-8893 1879-0070 |
language | eng |
recordid | cdi_proquest_miscellaneous_2429787244 |
source | Elsevier ScienceDirect Journals |
subjects | Carbapenemase Gram-negatives Rapid diagnostics Real-time PCR |
title | Fast and reliable detection of carbapenemase genes in various Gram negatives using a new commercially available fluorescence-based real-time polymerase chain reaction platform |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-29T02%3A29%3A39IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Fast%20and%20reliable%20detection%20of%20carbapenemase%20genes%20in%20various%20Gram%20negatives%20using%20a%20new%20commercially%20available%20fluorescence-based%20real-time%20polymerase%20chain%20reaction%20platform&rft.jtitle=Diagnostic%20microbiology%20and%20infectious%20disease&rft.au=Sadek,%20Mustafa&rft.date=2020-11&rft.volume=98&rft.issue=3&rft.spage=115127&rft.epage=115127&rft.pages=115127-115127&rft.artnum=115127&rft.issn=0732-8893&rft.eissn=1879-0070&rft_id=info:doi/10.1016/j.diagmicrobio.2020.115127&rft_dat=%3Cproquest_cross%3E2429787244%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2429787244&rft_id=info:pmid/&rft_els_id=S0732889320305046&rfr_iscdi=true |