Immunoinformatics design of multivalent chimeric vaccine for modulation of the immune system in Pseudomonas aeruginosa infection
Increasing in drug-resistant Pseudomonas aeruginosa and high mortality and morbidity rate have become a health challenge worldwide; therefore, developing the novel therapeutic strategies such as immunogenic vaccine candidate are required. Despite a substantial research effort, the future of immuniza...
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Veröffentlicht in: | Infection, genetics and evolution genetics and evolution, 2020-11, Vol.85, p.104462-104462, Article 104462 |
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creator | Aminnezhad, Sargol Abdi-Ali, Ahya Ghazanfari, Tooba Bandehpour, Mojgan Zarrabi, Mahboobe |
description | Increasing in drug-resistant Pseudomonas aeruginosa and high mortality and morbidity rate have become a health challenge worldwide; therefore, developing the novel therapeutic strategies such as immunogenic vaccine candidate are required. Despite a substantial research effort, the future of immunization against P. aeruginosa due to failure in covering two separate stages of infection, and furthermore, inducing ineffective type of immune response, still remains controversial. In this study, immunoinformatics approach was utilized to design multivalent chimeric vaccine from both stages of infection containing Lectin, HIV TAT peptide, N-terminal fragment of exotoxin A and Epi8 of outer membrane protein F (OprF) with hydrophobic linkers which have a high density of B-cell, T Lymphocytes (HTL), T Lymphocytes (CTL), and IFN-γ epitopes. The physicochemical properties, antigenicity, and allergenicity for designed vaccine were analyzed. 3D model generation and refinement further validation of the final vaccine were followed by computational docking with molecular dynamics analyses that demonstrated high- affinity interaction between vaccine and TLR-4. Finally, designed vaccine was in silico cloned in pET22b. We have expected that the designed vaccine able to elucidate innate, humoral and cellular innate immune responses and control the interaction of P. aeruginosa with host and maybe overcome to P. aeruginosa vaccines drawback.
[Display omitted]
•Pseudomonas aeruginosa has different stages of lifestyle containing acute and chronic with separate virulence factors.•Balance between cellular, humoral and Th1/Th2 immune responses is a critical challenge for P. aeruginosa vaccine development.•The novel chimeric vaccine was designed to effectively increase humoral and cellular immunities. |
doi_str_mv | 10.1016/j.meegid.2020.104462 |
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[Display omitted]
•Pseudomonas aeruginosa has different stages of lifestyle containing acute and chronic with separate virulence factors.•Balance between cellular, humoral and Th1/Th2 immune responses is a critical challenge for P. aeruginosa vaccine development.•The novel chimeric vaccine was designed to effectively increase humoral and cellular immunities.</description><identifier>ISSN: 1567-1348</identifier><identifier>EISSN: 1567-7257</identifier><identifier>DOI: 10.1016/j.meegid.2020.104462</identifier><identifier>PMID: 32682863</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Immunoinformatics ; Multivalent vaccine ; Pseudomonas aeruginosa</subject><ispartof>Infection, genetics and evolution, 2020-11, Vol.85, p.104462-104462, Article 104462</ispartof><rights>2020 Elsevier B.V.</rights><rights>Copyright © 2020 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c362t-225655a8a13f8d333978fde1a1820565e2ce018a2a87ad65aca8332093aa5d6c3</citedby><cites>FETCH-LOGICAL-c362t-225655a8a13f8d333978fde1a1820565e2ce018a2a87ad65aca8332093aa5d6c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.meegid.2020.104462$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3536,27903,27904,45974</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32682863$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Aminnezhad, Sargol</creatorcontrib><creatorcontrib>Abdi-Ali, Ahya</creatorcontrib><creatorcontrib>Ghazanfari, Tooba</creatorcontrib><creatorcontrib>Bandehpour, Mojgan</creatorcontrib><creatorcontrib>Zarrabi, Mahboobe</creatorcontrib><title>Immunoinformatics design of multivalent chimeric vaccine for modulation of the immune system in Pseudomonas aeruginosa infection</title><title>Infection, genetics and evolution</title><addtitle>Infect Genet Evol</addtitle><description>Increasing in drug-resistant Pseudomonas aeruginosa and high mortality and morbidity rate have become a health challenge worldwide; therefore, developing the novel therapeutic strategies such as immunogenic vaccine candidate are required. Despite a substantial research effort, the future of immunization against P. aeruginosa due to failure in covering two separate stages of infection, and furthermore, inducing ineffective type of immune response, still remains controversial. In this study, immunoinformatics approach was utilized to design multivalent chimeric vaccine from both stages of infection containing Lectin, HIV TAT peptide, N-terminal fragment of exotoxin A and Epi8 of outer membrane protein F (OprF) with hydrophobic linkers which have a high density of B-cell, T Lymphocytes (HTL), T Lymphocytes (CTL), and IFN-γ epitopes. The physicochemical properties, antigenicity, and allergenicity for designed vaccine were analyzed. 3D model generation and refinement further validation of the final vaccine were followed by computational docking with molecular dynamics analyses that demonstrated high- affinity interaction between vaccine and TLR-4. Finally, designed vaccine was in silico cloned in pET22b. We have expected that the designed vaccine able to elucidate innate, humoral and cellular innate immune responses and control the interaction of P. aeruginosa with host and maybe overcome to P. aeruginosa vaccines drawback.
[Display omitted]
•Pseudomonas aeruginosa has different stages of lifestyle containing acute and chronic with separate virulence factors.•Balance between cellular, humoral and Th1/Th2 immune responses is a critical challenge for P. aeruginosa vaccine development.•The novel chimeric vaccine was designed to effectively increase humoral and cellular immunities.</description><subject>Immunoinformatics</subject><subject>Multivalent vaccine</subject><subject>Pseudomonas aeruginosa</subject><issn>1567-1348</issn><issn>1567-7257</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNp9kD1vFDEQhi1ERELgHyDkkuYOf6y9vgYJRQEiRSJFUluDPXvxaW0He_ekdPx0vOxBSTXWzPPOyA8h7zjbcsb1x8M2Iu6D3womllbXafGCXHCl-00vVP_y9OayM-fkda0HxnjPhHlFzqXQRhgtL8ivmxjnlEMacokwBVepxxr2ieaBxnmcwhFGTBN1jyFiCY4ewbmQkLYAjdnPY0vlP_j0iDQs65DW5zphpCHRu4qzzzEnqBSwzPuQcoU2GdAtwTfkbICx4ttTvSQPX67vr75tbr9_vbn6fLtxUotpI4TSSoEBLgfjpZS73gweOXAjWBuhcMi4AQGmB68VODBSCraTAMprJy_Jh3XvU8k_Z6yTjaE6HEdImOdqRSeU2iktTEO7FXUl11pwsE8lRCjPljO7uLcHu7q3i3u7um-x96cL84-I_l_or-wGfFoBbP88Biy2uoDJoQ-lybA-h_9f-A0U_Zmu</recordid><startdate>202011</startdate><enddate>202011</enddate><creator>Aminnezhad, Sargol</creator><creator>Abdi-Ali, Ahya</creator><creator>Ghazanfari, Tooba</creator><creator>Bandehpour, Mojgan</creator><creator>Zarrabi, Mahboobe</creator><general>Elsevier B.V</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>202011</creationdate><title>Immunoinformatics design of multivalent chimeric vaccine for modulation of the immune system in Pseudomonas aeruginosa infection</title><author>Aminnezhad, Sargol ; Abdi-Ali, Ahya ; Ghazanfari, Tooba ; Bandehpour, Mojgan ; Zarrabi, Mahboobe</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c362t-225655a8a13f8d333978fde1a1820565e2ce018a2a87ad65aca8332093aa5d6c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Immunoinformatics</topic><topic>Multivalent vaccine</topic><topic>Pseudomonas aeruginosa</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Aminnezhad, Sargol</creatorcontrib><creatorcontrib>Abdi-Ali, Ahya</creatorcontrib><creatorcontrib>Ghazanfari, Tooba</creatorcontrib><creatorcontrib>Bandehpour, Mojgan</creatorcontrib><creatorcontrib>Zarrabi, Mahboobe</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Infection, genetics and evolution</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Aminnezhad, Sargol</au><au>Abdi-Ali, Ahya</au><au>Ghazanfari, Tooba</au><au>Bandehpour, Mojgan</au><au>Zarrabi, Mahboobe</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Immunoinformatics design of multivalent chimeric vaccine for modulation of the immune system in Pseudomonas aeruginosa infection</atitle><jtitle>Infection, genetics and evolution</jtitle><addtitle>Infect Genet Evol</addtitle><date>2020-11</date><risdate>2020</risdate><volume>85</volume><spage>104462</spage><epage>104462</epage><pages>104462-104462</pages><artnum>104462</artnum><issn>1567-1348</issn><eissn>1567-7257</eissn><abstract>Increasing in drug-resistant Pseudomonas aeruginosa and high mortality and morbidity rate have become a health challenge worldwide; therefore, developing the novel therapeutic strategies such as immunogenic vaccine candidate are required. Despite a substantial research effort, the future of immunization against P. aeruginosa due to failure in covering two separate stages of infection, and furthermore, inducing ineffective type of immune response, still remains controversial. In this study, immunoinformatics approach was utilized to design multivalent chimeric vaccine from both stages of infection containing Lectin, HIV TAT peptide, N-terminal fragment of exotoxin A and Epi8 of outer membrane protein F (OprF) with hydrophobic linkers which have a high density of B-cell, T Lymphocytes (HTL), T Lymphocytes (CTL), and IFN-γ epitopes. The physicochemical properties, antigenicity, and allergenicity for designed vaccine were analyzed. 3D model generation and refinement further validation of the final vaccine were followed by computational docking with molecular dynamics analyses that demonstrated high- affinity interaction between vaccine and TLR-4. Finally, designed vaccine was in silico cloned in pET22b. We have expected that the designed vaccine able to elucidate innate, humoral and cellular innate immune responses and control the interaction of P. aeruginosa with host and maybe overcome to P. aeruginosa vaccines drawback.
[Display omitted]
•Pseudomonas aeruginosa has different stages of lifestyle containing acute and chronic with separate virulence factors.•Balance between cellular, humoral and Th1/Th2 immune responses is a critical challenge for P. aeruginosa vaccine development.•The novel chimeric vaccine was designed to effectively increase humoral and cellular immunities.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>32682863</pmid><doi>10.1016/j.meegid.2020.104462</doi><tpages>1</tpages></addata></record> |
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subjects | Immunoinformatics Multivalent vaccine Pseudomonas aeruginosa |
title | Immunoinformatics design of multivalent chimeric vaccine for modulation of the immune system in Pseudomonas aeruginosa infection |
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