Souporcell: robust clustering of single-cell RNA-seq data by genotype without reference genotypes

Methods to deconvolve single-cell RNA-sequencing (scRNA-seq) data are necessary for samples containing a mixture of genotypes, whether they are natural or experimentally combined. Multiplexing across donors is a popular experimental design that can avoid batch effects, reduce costs and improve doubl...

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Veröffentlicht in:Nature methods 2020-06, Vol.17 (6), p.615-620
Hauptverfasser: Heaton, Haynes, Talman, Arthur M., Knights, Andrew, Imaz, Maria, Gaffney, Daniel J., Durbin, Richard, Hemberg, Martin, Lawniczak, Mara K. N.
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Sprache:eng
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