Enzymatic reactions and microorganisms producing the various isomers of hydroxyproline

Hydroxyproline is an industrially important compound with applications in the pharmaceutical, nutrition, and cosmetic industries. trans -4-Hydroxy- l -proline is recognized as the most abundant of the eight possible isomers (hydroxy group at C-3 or C-4, cis - or trans -configuration, and l - or d -f...

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Veröffentlicht in:Applied microbiology and biotechnology 2020-06, Vol.104 (11), p.4771-4779
Hauptverfasser: Hara, Ryotaro, Kino, Kuniki
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description Hydroxyproline is an industrially important compound with applications in the pharmaceutical, nutrition, and cosmetic industries. trans -4-Hydroxy- l -proline is recognized as the most abundant of the eight possible isomers (hydroxy group at C-3 or C-4, cis - or trans -configuration, and l - or d -form). However, little attention has been paid to the rare isomers, probably due to their limited availability. This mini-review provides an overview of recent advances in microbial and enzymatic processes to develop practical production strategies for various hydroxyprolines. Here, we introduce three screening strategies, namely, activity-, sequence-, and metabolite-based approaches, allowing identification of diverse proline-hydroxylating enzymes with different product specificities. All naturally occurring hydroxyproline isomers can be produced by using suitable hydroxylases in a highly regio- and stereo-selective manner. Furthermore, crystal structures of relevant hydroxylases provide much insight into their functional roles. Since hydroxylases acting on free l -proline belong to the 2-oxoglutarate-dependent dioxygenase superfamily, cellular metabolism of Escherichia coli coupled with a hydroxylase is a valuable source of 2-oxoglutarate, which is indispensable as a co-substrate in l -proline hydroxylation. Further, microbial hydroxyproline 2-epimerase may serve as a highly adaptable tool to convert l -hydroxyproline into d -hydroxyproline. Key points • Proline hydroxylases serve as powerful tools for selective l -proline hydroxylation. • Engineered Escherichia coli are a robust platform for hydroxyproline production. • Hydroxyproline epimerase converts l -hydroxyproline into d -hydroxyproline.
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However, little attention has been paid to the rare isomers, probably due to their limited availability. This mini-review provides an overview of recent advances in microbial and enzymatic processes to develop practical production strategies for various hydroxyprolines. Here, we introduce three screening strategies, namely, activity-, sequence-, and metabolite-based approaches, allowing identification of diverse proline-hydroxylating enzymes with different product specificities. All naturally occurring hydroxyproline isomers can be produced by using suitable hydroxylases in a highly regio- and stereo-selective manner. Furthermore, crystal structures of relevant hydroxylases provide much insight into their functional roles. Since hydroxylases acting on free l -proline belong to the 2-oxoglutarate-dependent dioxygenase superfamily, cellular metabolism of Escherichia coli coupled with a hydroxylase is a valuable source of 2-oxoglutarate, which is indispensable as a co-substrate in l -proline hydroxylation. Further, microbial hydroxyproline 2-epimerase may serve as a highly adaptable tool to convert l -hydroxyproline into d -hydroxyproline. 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However, little attention has been paid to the rare isomers, probably due to their limited availability. This mini-review provides an overview of recent advances in microbial and enzymatic processes to develop practical production strategies for various hydroxyprolines. Here, we introduce three screening strategies, namely, activity-, sequence-, and metabolite-based approaches, allowing identification of diverse proline-hydroxylating enzymes with different product specificities. All naturally occurring hydroxyproline isomers can be produced by using suitable hydroxylases in a highly regio- and stereo-selective manner. Furthermore, crystal structures of relevant hydroxylases provide much insight into their functional roles. Since hydroxylases acting on free l -proline belong to the 2-oxoglutarate-dependent dioxygenase superfamily, cellular metabolism of Escherichia coli coupled with a hydroxylase is a valuable source of 2-oxoglutarate, which is indispensable as a co-substrate in l -proline hydroxylation. Further, microbial hydroxyproline 2-epimerase may serve as a highly adaptable tool to convert l -hydroxyproline into d -hydroxyproline. 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However, little attention has been paid to the rare isomers, probably due to their limited availability. This mini-review provides an overview of recent advances in microbial and enzymatic processes to develop practical production strategies for various hydroxyprolines. Here, we introduce three screening strategies, namely, activity-, sequence-, and metabolite-based approaches, allowing identification of diverse proline-hydroxylating enzymes with different product specificities. All naturally occurring hydroxyproline isomers can be produced by using suitable hydroxylases in a highly regio- and stereo-selective manner. Furthermore, crystal structures of relevant hydroxylases provide much insight into their functional roles. Since hydroxylases acting on free l -proline belong to the 2-oxoglutarate-dependent dioxygenase superfamily, cellular metabolism of Escherichia coli coupled with a hydroxylase is a valuable source of 2-oxoglutarate, which is indispensable as a co-substrate in l -proline hydroxylation. Further, microbial hydroxyproline 2-epimerase may serve as a highly adaptable tool to convert l -hydroxyproline into d -hydroxyproline. Key points • Proline hydroxylases serve as powerful tools for selective l -proline hydroxylation. • Engineered Escherichia coli are a robust platform for hydroxyproline production. • Hydroxyproline epimerase converts l -hydroxyproline into d -hydroxyproline.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>32291491</pmid><doi>10.1007/s00253-020-10603-1</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0003-2367-3876</orcidid><orcidid>https://orcid.org/0000-0003-0553-3837</orcidid></addata></record>
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subjects Amino Acid Isomerases - metabolism
Biocatalysis
Biological products
Biomedical and Life Sciences
Biotechnology
Crystal structure
Crystals
Dioxygenase
E coli
Enzyme Induction
Epimerase
Escherichia coli
Escherichia coli - enzymology
Hydroxylase
Hydroxylases
Hydroxylation
Hydroxyproline
Hydroxyproline - biosynthesis
Isomerism
Isomers
Ketoglutaric acid
Life Sciences
Metabolites
Microbial Genetics and Genomics
Microbiology
Microorganisms
Mini-Review
Mixed Function Oxygenases - metabolism
Nutrition
Physiological aspects
Proline
Reviews
Structure
Substrates
title Enzymatic reactions and microorganisms producing the various isomers of hydroxyproline
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