Venom gland transcriptome from Heloderma horridum horridum by high-throughput sequencing
Lizards of the Helodermatidae (Anguimorpha) family consist of at least two well recognized species: Heloderma horridum horridum and Heloderma suspectum suspectum. They contain specialized glands in their jaws that produce venomous secretions that causes envenoming symptoms to bitten animals. One way...
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Veröffentlicht in: | Toxicon (Oxford) 2020-06, Vol.180, p.62-78 |
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creator | Lino-López, Gisela Jareth Valdez-Velázquez, Laura Leticia Corzo, Gerardo Romero-Gutiérrez, Maria Teresa Jiménez-Vargas, Juana María Rodríguez-Vázquez, Armando Vazquez-Vuelvas, Oscar F. Gonzalez-Carrillo, Gabino |
description | Lizards of the Helodermatidae (Anguimorpha) family consist of at least two well recognized species: Heloderma horridum horridum and Heloderma suspectum suspectum. They contain specialized glands in their jaws that produce venomous secretions that causes envenoming symptoms to bitten animals. One way to study proteins from such secretions is by RNA-seq; a powerful molecular tool to characterize the transcriptome of such specialized gland, and its protein secretions. The total RNA from venom gland tissues of H. horridum horridum was extracted and a cDNA library was constructed and sequenced. Overall, 114,172 transcripts were found, and 199 were annotated based on sequence similarities to previously described peptides/proteins. Transcripts coding for putative exendins, defensins, natriuretics and serine protease inhibitors were the most highly expressed. Transcripts that code for several putative serine proteases, phospholipases, metalloproteases, lipases, L-amino oxidase and nucleases were also found. Some of the novel identified transcripts were translationally controlled tumor proteins, venom factors, vespryns, waprins, lectins, cystatins and serine protease inhibitors. All these new protein structures may contribute to a better understanding of the venomous secretions of the Helodermatidae family.
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•In the transcriptome of Heloderma horridum horridum identified one hundred ninety-nine annotated transcripts.•Thirty-two protein families were found in Hh. horridum venom gland with diverse putative functions.•Enzymes were the most abundant components of venom gland transcriptomic.•The annotated protein-coding transcripts have identities to snake (42%) and lizard (36%) venom components.•Transcripts coding putative exendins, defensins, natriuretics, and kazal inhibitor were the most highly expressed. |
doi_str_mv | 10.1016/j.toxicon.2020.04.003 |
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[Display omitted]
•In the transcriptome of Heloderma horridum horridum identified one hundred ninety-nine annotated transcripts.•Thirty-two protein families were found in Hh. horridum venom gland with diverse putative functions.•Enzymes were the most abundant components of venom gland transcriptomic.•The annotated protein-coding transcripts have identities to snake (42%) and lizard (36%) venom components.•Transcripts coding putative exendins, defensins, natriuretics, and kazal inhibitor were the most highly expressed.</description><identifier>ISSN: 0041-0101</identifier><identifier>EISSN: 1879-3150</identifier><identifier>DOI: 10.1016/j.toxicon.2020.04.003</identifier><identifier>PMID: 32283106</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>Amino Acid Sequence ; Animals ; Base Sequence ; Heloderma horridum horridum ; High-Throughput Nucleotide Sequencing ; Lizard ; Lizards - genetics ; Lizards - metabolism ; Peptides ; Phospholipases ; RNA-Seq ; Transcriptome ; Venom ; Venoms</subject><ispartof>Toxicon (Oxford), 2020-06, Vol.180, p.62-78</ispartof><rights>2020 Elsevier Ltd</rights><rights>Copyright © 2020 Elsevier Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c365t-76cdbd964ed6bd03a54d7a334d063180c68e053292a7348a9f9cc430808b60d53</citedby><cites>FETCH-LOGICAL-c365t-76cdbd964ed6bd03a54d7a334d063180c68e053292a7348a9f9cc430808b60d53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.toxicon.2020.04.003$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3536,27903,27904,45974</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32283106$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lino-López, Gisela Jareth</creatorcontrib><creatorcontrib>Valdez-Velázquez, Laura Leticia</creatorcontrib><creatorcontrib>Corzo, Gerardo</creatorcontrib><creatorcontrib>Romero-Gutiérrez, Maria Teresa</creatorcontrib><creatorcontrib>Jiménez-Vargas, Juana María</creatorcontrib><creatorcontrib>Rodríguez-Vázquez, Armando</creatorcontrib><creatorcontrib>Vazquez-Vuelvas, Oscar F.</creatorcontrib><creatorcontrib>Gonzalez-Carrillo, Gabino</creatorcontrib><title>Venom gland transcriptome from Heloderma horridum horridum by high-throughput sequencing</title><title>Toxicon (Oxford)</title><addtitle>Toxicon</addtitle><description>Lizards of the Helodermatidae (Anguimorpha) family consist of at least two well recognized species: Heloderma horridum horridum and Heloderma suspectum suspectum. They contain specialized glands in their jaws that produce venomous secretions that causes envenoming symptoms to bitten animals. One way to study proteins from such secretions is by RNA-seq; a powerful molecular tool to characterize the transcriptome of such specialized gland, and its protein secretions. The total RNA from venom gland tissues of H. horridum horridum was extracted and a cDNA library was constructed and sequenced. Overall, 114,172 transcripts were found, and 199 were annotated based on sequence similarities to previously described peptides/proteins. Transcripts coding for putative exendins, defensins, natriuretics and serine protease inhibitors were the most highly expressed. Transcripts that code for several putative serine proteases, phospholipases, metalloproteases, lipases, L-amino oxidase and nucleases were also found. Some of the novel identified transcripts were translationally controlled tumor proteins, venom factors, vespryns, waprins, lectins, cystatins and serine protease inhibitors. All these new protein structures may contribute to a better understanding of the venomous secretions of the Helodermatidae family.
[Display omitted]
•In the transcriptome of Heloderma horridum horridum identified one hundred ninety-nine annotated transcripts.•Thirty-two protein families were found in Hh. horridum venom gland with diverse putative functions.•Enzymes were the most abundant components of venom gland transcriptomic.•The annotated protein-coding transcripts have identities to snake (42%) and lizard (36%) venom components.•Transcripts coding putative exendins, defensins, natriuretics, and kazal inhibitor were the most highly expressed.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>Heloderma horridum horridum</subject><subject>High-Throughput Nucleotide Sequencing</subject><subject>Lizard</subject><subject>Lizards - genetics</subject><subject>Lizards - metabolism</subject><subject>Peptides</subject><subject>Phospholipases</subject><subject>RNA-Seq</subject><subject>Transcriptome</subject><subject>Venom</subject><subject>Venoms</subject><issn>0041-0101</issn><issn>1879-3150</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkEFLwzAUx4Mobk4_gtKjl9aXpk3bk8hQJwy8qHgLafK2ZqzNTFpx396MTT16yoP83vvz_xFySSGhQPnNKuntl1G2S1JIIYEsAWBHZEzLoooZzeGYjAEyGkPAR-TM-xUEoqz4KRmxNC0ZBT4m72_Y2TZarmWno97JzitnNr1tMVq48DHDtdXoWhk11jmjh_ZvqLdRY5ZN3DfODstmM_SRx48BO2W65Tk5Wci1x4vDOyGvD_cv01k8f358mt7NY8V43scFV7rWFc9Q81oDk3mmC8lYpoEzWoLiJULO0iqVBctKWS0qpTIGJZQ1B52zCbne3904G7J9L1rjFa5DIbSDF2moXFCogAY036PKWe8dLsTGmVa6raAgdlLFShykip1UAZkIysLe1SFiqFvUv1s_FgNwuwcwFP006IRXJmhAbRyqXmhr_on4BhcejAo</recordid><startdate>202006</startdate><enddate>202006</enddate><creator>Lino-López, Gisela Jareth</creator><creator>Valdez-Velázquez, Laura Leticia</creator><creator>Corzo, Gerardo</creator><creator>Romero-Gutiérrez, Maria Teresa</creator><creator>Jiménez-Vargas, Juana María</creator><creator>Rodríguez-Vázquez, Armando</creator><creator>Vazquez-Vuelvas, Oscar F.</creator><creator>Gonzalez-Carrillo, Gabino</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>202006</creationdate><title>Venom gland transcriptome from Heloderma horridum horridum by high-throughput sequencing</title><author>Lino-López, Gisela Jareth ; Valdez-Velázquez, Laura Leticia ; Corzo, Gerardo ; Romero-Gutiérrez, Maria Teresa ; Jiménez-Vargas, Juana María ; Rodríguez-Vázquez, Armando ; Vazquez-Vuelvas, Oscar F. ; Gonzalez-Carrillo, Gabino</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c365t-76cdbd964ed6bd03a54d7a334d063180c68e053292a7348a9f9cc430808b60d53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Base Sequence</topic><topic>Heloderma horridum horridum</topic><topic>High-Throughput Nucleotide Sequencing</topic><topic>Lizard</topic><topic>Lizards - genetics</topic><topic>Lizards - metabolism</topic><topic>Peptides</topic><topic>Phospholipases</topic><topic>RNA-Seq</topic><topic>Transcriptome</topic><topic>Venom</topic><topic>Venoms</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lino-López, Gisela Jareth</creatorcontrib><creatorcontrib>Valdez-Velázquez, Laura Leticia</creatorcontrib><creatorcontrib>Corzo, Gerardo</creatorcontrib><creatorcontrib>Romero-Gutiérrez, Maria Teresa</creatorcontrib><creatorcontrib>Jiménez-Vargas, Juana María</creatorcontrib><creatorcontrib>Rodríguez-Vázquez, Armando</creatorcontrib><creatorcontrib>Vazquez-Vuelvas, Oscar F.</creatorcontrib><creatorcontrib>Gonzalez-Carrillo, Gabino</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Toxicon (Oxford)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lino-López, Gisela Jareth</au><au>Valdez-Velázquez, Laura Leticia</au><au>Corzo, Gerardo</au><au>Romero-Gutiérrez, Maria Teresa</au><au>Jiménez-Vargas, Juana María</au><au>Rodríguez-Vázquez, Armando</au><au>Vazquez-Vuelvas, Oscar F.</au><au>Gonzalez-Carrillo, Gabino</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Venom gland transcriptome from Heloderma horridum horridum by high-throughput sequencing</atitle><jtitle>Toxicon (Oxford)</jtitle><addtitle>Toxicon</addtitle><date>2020-06</date><risdate>2020</risdate><volume>180</volume><spage>62</spage><epage>78</epage><pages>62-78</pages><issn>0041-0101</issn><eissn>1879-3150</eissn><abstract>Lizards of the Helodermatidae (Anguimorpha) family consist of at least two well recognized species: Heloderma horridum horridum and Heloderma suspectum suspectum. They contain specialized glands in their jaws that produce venomous secretions that causes envenoming symptoms to bitten animals. One way to study proteins from such secretions is by RNA-seq; a powerful molecular tool to characterize the transcriptome of such specialized gland, and its protein secretions. The total RNA from venom gland tissues of H. horridum horridum was extracted and a cDNA library was constructed and sequenced. Overall, 114,172 transcripts were found, and 199 were annotated based on sequence similarities to previously described peptides/proteins. Transcripts coding for putative exendins, defensins, natriuretics and serine protease inhibitors were the most highly expressed. Transcripts that code for several putative serine proteases, phospholipases, metalloproteases, lipases, L-amino oxidase and nucleases were also found. Some of the novel identified transcripts were translationally controlled tumor proteins, venom factors, vespryns, waprins, lectins, cystatins and serine protease inhibitors. All these new protein structures may contribute to a better understanding of the venomous secretions of the Helodermatidae family.
[Display omitted]
•In the transcriptome of Heloderma horridum horridum identified one hundred ninety-nine annotated transcripts.•Thirty-two protein families were found in Hh. horridum venom gland with diverse putative functions.•Enzymes were the most abundant components of venom gland transcriptomic.•The annotated protein-coding transcripts have identities to snake (42%) and lizard (36%) venom components.•Transcripts coding putative exendins, defensins, natriuretics, and kazal inhibitor were the most highly expressed.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>32283106</pmid><doi>10.1016/j.toxicon.2020.04.003</doi><tpages>17</tpages></addata></record> |
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subjects | Amino Acid Sequence Animals Base Sequence Heloderma horridum horridum High-Throughput Nucleotide Sequencing Lizard Lizards - genetics Lizards - metabolism Peptides Phospholipases RNA-Seq Transcriptome Venom Venoms |
title | Venom gland transcriptome from Heloderma horridum horridum by high-throughput sequencing |
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