Venom gland transcriptome from Heloderma horridum horridum by high-throughput sequencing

Lizards of the Helodermatidae (Anguimorpha) family consist of at least two well recognized species: Heloderma horridum horridum and Heloderma suspectum suspectum. They contain specialized glands in their jaws that produce venomous secretions that causes envenoming symptoms to bitten animals. One way...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Toxicon (Oxford) 2020-06, Vol.180, p.62-78
Hauptverfasser: Lino-López, Gisela Jareth, Valdez-Velázquez, Laura Leticia, Corzo, Gerardo, Romero-Gutiérrez, Maria Teresa, Jiménez-Vargas, Juana María, Rodríguez-Vázquez, Armando, Vazquez-Vuelvas, Oscar F., Gonzalez-Carrillo, Gabino
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 78
container_issue
container_start_page 62
container_title Toxicon (Oxford)
container_volume 180
creator Lino-López, Gisela Jareth
Valdez-Velázquez, Laura Leticia
Corzo, Gerardo
Romero-Gutiérrez, Maria Teresa
Jiménez-Vargas, Juana María
Rodríguez-Vázquez, Armando
Vazquez-Vuelvas, Oscar F.
Gonzalez-Carrillo, Gabino
description Lizards of the Helodermatidae (Anguimorpha) family consist of at least two well recognized species: Heloderma horridum horridum and Heloderma suspectum suspectum. They contain specialized glands in their jaws that produce venomous secretions that causes envenoming symptoms to bitten animals. One way to study proteins from such secretions is by RNA-seq; a powerful molecular tool to characterize the transcriptome of such specialized gland, and its protein secretions. The total RNA from venom gland tissues of H. horridum horridum was extracted and a cDNA library was constructed and sequenced. Overall, 114,172 transcripts were found, and 199 were annotated based on sequence similarities to previously described peptides/proteins. Transcripts coding for putative exendins, defensins, natriuretics and serine protease inhibitors were the most highly expressed. Transcripts that code for several putative serine proteases, phospholipases, metalloproteases, lipases, L-amino oxidase and nucleases were also found. Some of the novel identified transcripts were translationally controlled tumor proteins, venom factors, vespryns, waprins, lectins, cystatins and serine protease inhibitors. All these new protein structures may contribute to a better understanding of the venomous secretions of the Helodermatidae family. [Display omitted] •In the transcriptome of Heloderma horridum horridum identified one hundred ninety-nine annotated transcripts.•Thirty-two protein families were found in Hh. horridum venom gland with diverse putative functions.•Enzymes were the most abundant components of venom gland transcriptomic.•The annotated protein-coding transcripts have identities to snake (42%) and lizard (36%) venom components.•Transcripts coding putative exendins, defensins, natriuretics, and kazal inhibitor were the most highly expressed.
doi_str_mv 10.1016/j.toxicon.2020.04.003
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_2389710901</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S0041010120301082</els_id><sourcerecordid>2389710901</sourcerecordid><originalsourceid>FETCH-LOGICAL-c365t-76cdbd964ed6bd03a54d7a334d063180c68e053292a7348a9f9cc430808b60d53</originalsourceid><addsrcrecordid>eNqFkEFLwzAUx4Mobk4_gtKjl9aXpk3bk8hQJwy8qHgLafK2ZqzNTFpx396MTT16yoP83vvz_xFySSGhQPnNKuntl1G2S1JIIYEsAWBHZEzLoooZzeGYjAEyGkPAR-TM-xUEoqz4KRmxNC0ZBT4m72_Y2TZarmWno97JzitnNr1tMVq48DHDtdXoWhk11jmjh_ZvqLdRY5ZN3DfODstmM_SRx48BO2W65Tk5Wci1x4vDOyGvD_cv01k8f358mt7NY8V43scFV7rWFc9Q81oDk3mmC8lYpoEzWoLiJULO0iqVBctKWS0qpTIGJZQ1B52zCbne3904G7J9L1rjFa5DIbSDF2moXFCogAY036PKWe8dLsTGmVa6raAgdlLFShykip1UAZkIysLe1SFiqFvUv1s_FgNwuwcwFP006IRXJmhAbRyqXmhr_on4BhcejAo</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2389710901</pqid></control><display><type>article</type><title>Venom gland transcriptome from Heloderma horridum horridum by high-throughput sequencing</title><source>MEDLINE</source><source>Elsevier ScienceDirect Journals</source><creator>Lino-López, Gisela Jareth ; Valdez-Velázquez, Laura Leticia ; Corzo, Gerardo ; Romero-Gutiérrez, Maria Teresa ; Jiménez-Vargas, Juana María ; Rodríguez-Vázquez, Armando ; Vazquez-Vuelvas, Oscar F. ; Gonzalez-Carrillo, Gabino</creator><creatorcontrib>Lino-López, Gisela Jareth ; Valdez-Velázquez, Laura Leticia ; Corzo, Gerardo ; Romero-Gutiérrez, Maria Teresa ; Jiménez-Vargas, Juana María ; Rodríguez-Vázquez, Armando ; Vazquez-Vuelvas, Oscar F. ; Gonzalez-Carrillo, Gabino</creatorcontrib><description>Lizards of the Helodermatidae (Anguimorpha) family consist of at least two well recognized species: Heloderma horridum horridum and Heloderma suspectum suspectum. They contain specialized glands in their jaws that produce venomous secretions that causes envenoming symptoms to bitten animals. One way to study proteins from such secretions is by RNA-seq; a powerful molecular tool to characterize the transcriptome of such specialized gland, and its protein secretions. The total RNA from venom gland tissues of H. horridum horridum was extracted and a cDNA library was constructed and sequenced. Overall, 114,172 transcripts were found, and 199 were annotated based on sequence similarities to previously described peptides/proteins. Transcripts coding for putative exendins, defensins, natriuretics and serine protease inhibitors were the most highly expressed. Transcripts that code for several putative serine proteases, phospholipases, metalloproteases, lipases, L-amino oxidase and nucleases were also found. Some of the novel identified transcripts were translationally controlled tumor proteins, venom factors, vespryns, waprins, lectins, cystatins and serine protease inhibitors. All these new protein structures may contribute to a better understanding of the venomous secretions of the Helodermatidae family. [Display omitted] •In the transcriptome of Heloderma horridum horridum identified one hundred ninety-nine annotated transcripts.•Thirty-two protein families were found in Hh. horridum venom gland with diverse putative functions.•Enzymes were the most abundant components of venom gland transcriptomic.•The annotated protein-coding transcripts have identities to snake (42%) and lizard (36%) venom components.•Transcripts coding putative exendins, defensins, natriuretics, and kazal inhibitor were the most highly expressed.</description><identifier>ISSN: 0041-0101</identifier><identifier>EISSN: 1879-3150</identifier><identifier>DOI: 10.1016/j.toxicon.2020.04.003</identifier><identifier>PMID: 32283106</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>Amino Acid Sequence ; Animals ; Base Sequence ; Heloderma horridum horridum ; High-Throughput Nucleotide Sequencing ; Lizard ; Lizards - genetics ; Lizards - metabolism ; Peptides ; Phospholipases ; RNA-Seq ; Transcriptome ; Venom ; Venoms</subject><ispartof>Toxicon (Oxford), 2020-06, Vol.180, p.62-78</ispartof><rights>2020 Elsevier Ltd</rights><rights>Copyright © 2020 Elsevier Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c365t-76cdbd964ed6bd03a54d7a334d063180c68e053292a7348a9f9cc430808b60d53</citedby><cites>FETCH-LOGICAL-c365t-76cdbd964ed6bd03a54d7a334d063180c68e053292a7348a9f9cc430808b60d53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.toxicon.2020.04.003$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3536,27903,27904,45974</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32283106$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lino-López, Gisela Jareth</creatorcontrib><creatorcontrib>Valdez-Velázquez, Laura Leticia</creatorcontrib><creatorcontrib>Corzo, Gerardo</creatorcontrib><creatorcontrib>Romero-Gutiérrez, Maria Teresa</creatorcontrib><creatorcontrib>Jiménez-Vargas, Juana María</creatorcontrib><creatorcontrib>Rodríguez-Vázquez, Armando</creatorcontrib><creatorcontrib>Vazquez-Vuelvas, Oscar F.</creatorcontrib><creatorcontrib>Gonzalez-Carrillo, Gabino</creatorcontrib><title>Venom gland transcriptome from Heloderma horridum horridum by high-throughput sequencing</title><title>Toxicon (Oxford)</title><addtitle>Toxicon</addtitle><description>Lizards of the Helodermatidae (Anguimorpha) family consist of at least two well recognized species: Heloderma horridum horridum and Heloderma suspectum suspectum. They contain specialized glands in their jaws that produce venomous secretions that causes envenoming symptoms to bitten animals. One way to study proteins from such secretions is by RNA-seq; a powerful molecular tool to characterize the transcriptome of such specialized gland, and its protein secretions. The total RNA from venom gland tissues of H. horridum horridum was extracted and a cDNA library was constructed and sequenced. Overall, 114,172 transcripts were found, and 199 were annotated based on sequence similarities to previously described peptides/proteins. Transcripts coding for putative exendins, defensins, natriuretics and serine protease inhibitors were the most highly expressed. Transcripts that code for several putative serine proteases, phospholipases, metalloproteases, lipases, L-amino oxidase and nucleases were also found. Some of the novel identified transcripts were translationally controlled tumor proteins, venom factors, vespryns, waprins, lectins, cystatins and serine protease inhibitors. All these new protein structures may contribute to a better understanding of the venomous secretions of the Helodermatidae family. [Display omitted] •In the transcriptome of Heloderma horridum horridum identified one hundred ninety-nine annotated transcripts.•Thirty-two protein families were found in Hh. horridum venom gland with diverse putative functions.•Enzymes were the most abundant components of venom gland transcriptomic.•The annotated protein-coding transcripts have identities to snake (42%) and lizard (36%) venom components.•Transcripts coding putative exendins, defensins, natriuretics, and kazal inhibitor were the most highly expressed.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>Heloderma horridum horridum</subject><subject>High-Throughput Nucleotide Sequencing</subject><subject>Lizard</subject><subject>Lizards - genetics</subject><subject>Lizards - metabolism</subject><subject>Peptides</subject><subject>Phospholipases</subject><subject>RNA-Seq</subject><subject>Transcriptome</subject><subject>Venom</subject><subject>Venoms</subject><issn>0041-0101</issn><issn>1879-3150</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkEFLwzAUx4Mobk4_gtKjl9aXpk3bk8hQJwy8qHgLafK2ZqzNTFpx396MTT16yoP83vvz_xFySSGhQPnNKuntl1G2S1JIIYEsAWBHZEzLoooZzeGYjAEyGkPAR-TM-xUEoqz4KRmxNC0ZBT4m72_Y2TZarmWno97JzitnNr1tMVq48DHDtdXoWhk11jmjh_ZvqLdRY5ZN3DfODstmM_SRx48BO2W65Tk5Wci1x4vDOyGvD_cv01k8f358mt7NY8V43scFV7rWFc9Q81oDk3mmC8lYpoEzWoLiJULO0iqVBctKWS0qpTIGJZQ1B52zCbne3904G7J9L1rjFa5DIbSDF2moXFCogAY036PKWe8dLsTGmVa6raAgdlLFShykip1UAZkIysLe1SFiqFvUv1s_FgNwuwcwFP006IRXJmhAbRyqXmhr_on4BhcejAo</recordid><startdate>202006</startdate><enddate>202006</enddate><creator>Lino-López, Gisela Jareth</creator><creator>Valdez-Velázquez, Laura Leticia</creator><creator>Corzo, Gerardo</creator><creator>Romero-Gutiérrez, Maria Teresa</creator><creator>Jiménez-Vargas, Juana María</creator><creator>Rodríguez-Vázquez, Armando</creator><creator>Vazquez-Vuelvas, Oscar F.</creator><creator>Gonzalez-Carrillo, Gabino</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>202006</creationdate><title>Venom gland transcriptome from Heloderma horridum horridum by high-throughput sequencing</title><author>Lino-López, Gisela Jareth ; Valdez-Velázquez, Laura Leticia ; Corzo, Gerardo ; Romero-Gutiérrez, Maria Teresa ; Jiménez-Vargas, Juana María ; Rodríguez-Vázquez, Armando ; Vazquez-Vuelvas, Oscar F. ; Gonzalez-Carrillo, Gabino</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c365t-76cdbd964ed6bd03a54d7a334d063180c68e053292a7348a9f9cc430808b60d53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Base Sequence</topic><topic>Heloderma horridum horridum</topic><topic>High-Throughput Nucleotide Sequencing</topic><topic>Lizard</topic><topic>Lizards - genetics</topic><topic>Lizards - metabolism</topic><topic>Peptides</topic><topic>Phospholipases</topic><topic>RNA-Seq</topic><topic>Transcriptome</topic><topic>Venom</topic><topic>Venoms</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lino-López, Gisela Jareth</creatorcontrib><creatorcontrib>Valdez-Velázquez, Laura Leticia</creatorcontrib><creatorcontrib>Corzo, Gerardo</creatorcontrib><creatorcontrib>Romero-Gutiérrez, Maria Teresa</creatorcontrib><creatorcontrib>Jiménez-Vargas, Juana María</creatorcontrib><creatorcontrib>Rodríguez-Vázquez, Armando</creatorcontrib><creatorcontrib>Vazquez-Vuelvas, Oscar F.</creatorcontrib><creatorcontrib>Gonzalez-Carrillo, Gabino</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Toxicon (Oxford)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lino-López, Gisela Jareth</au><au>Valdez-Velázquez, Laura Leticia</au><au>Corzo, Gerardo</au><au>Romero-Gutiérrez, Maria Teresa</au><au>Jiménez-Vargas, Juana María</au><au>Rodríguez-Vázquez, Armando</au><au>Vazquez-Vuelvas, Oscar F.</au><au>Gonzalez-Carrillo, Gabino</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Venom gland transcriptome from Heloderma horridum horridum by high-throughput sequencing</atitle><jtitle>Toxicon (Oxford)</jtitle><addtitle>Toxicon</addtitle><date>2020-06</date><risdate>2020</risdate><volume>180</volume><spage>62</spage><epage>78</epage><pages>62-78</pages><issn>0041-0101</issn><eissn>1879-3150</eissn><abstract>Lizards of the Helodermatidae (Anguimorpha) family consist of at least two well recognized species: Heloderma horridum horridum and Heloderma suspectum suspectum. They contain specialized glands in their jaws that produce venomous secretions that causes envenoming symptoms to bitten animals. One way to study proteins from such secretions is by RNA-seq; a powerful molecular tool to characterize the transcriptome of such specialized gland, and its protein secretions. The total RNA from venom gland tissues of H. horridum horridum was extracted and a cDNA library was constructed and sequenced. Overall, 114,172 transcripts were found, and 199 were annotated based on sequence similarities to previously described peptides/proteins. Transcripts coding for putative exendins, defensins, natriuretics and serine protease inhibitors were the most highly expressed. Transcripts that code for several putative serine proteases, phospholipases, metalloproteases, lipases, L-amino oxidase and nucleases were also found. Some of the novel identified transcripts were translationally controlled tumor proteins, venom factors, vespryns, waprins, lectins, cystatins and serine protease inhibitors. All these new protein structures may contribute to a better understanding of the venomous secretions of the Helodermatidae family. [Display omitted] •In the transcriptome of Heloderma horridum horridum identified one hundred ninety-nine annotated transcripts.•Thirty-two protein families were found in Hh. horridum venom gland with diverse putative functions.•Enzymes were the most abundant components of venom gland transcriptomic.•The annotated protein-coding transcripts have identities to snake (42%) and lizard (36%) venom components.•Transcripts coding putative exendins, defensins, natriuretics, and kazal inhibitor were the most highly expressed.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>32283106</pmid><doi>10.1016/j.toxicon.2020.04.003</doi><tpages>17</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0041-0101
ispartof Toxicon (Oxford), 2020-06, Vol.180, p.62-78
issn 0041-0101
1879-3150
language eng
recordid cdi_proquest_miscellaneous_2389710901
source MEDLINE; Elsevier ScienceDirect Journals
subjects Amino Acid Sequence
Animals
Base Sequence
Heloderma horridum horridum
High-Throughput Nucleotide Sequencing
Lizard
Lizards - genetics
Lizards - metabolism
Peptides
Phospholipases
RNA-Seq
Transcriptome
Venom
Venoms
title Venom gland transcriptome from Heloderma horridum horridum by high-throughput sequencing
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-23T04%3A45%3A43IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Venom%20gland%20transcriptome%20from%20Heloderma%20horridum%20horridum%20by%20high-throughput%20sequencing&rft.jtitle=Toxicon%20(Oxford)&rft.au=Lino-L%C3%B3pez,%20Gisela%20Jareth&rft.date=2020-06&rft.volume=180&rft.spage=62&rft.epage=78&rft.pages=62-78&rft.issn=0041-0101&rft.eissn=1879-3150&rft_id=info:doi/10.1016/j.toxicon.2020.04.003&rft_dat=%3Cproquest_cross%3E2389710901%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2389710901&rft_id=info:pmid/32283106&rft_els_id=S0041010120301082&rfr_iscdi=true