Expression profiling of Cordyceps DnaJ protein family in Tolypocladium guangdongense during developmental and temperature stress processes
DnaJ is an important molecular chaperone, with significant roles in growth, development, and stress resistance. Studies on the DnaJ gene family in macro-fungi such as Cordyceps spp. s.l. is scare. In this study, 22, 20, and 24 putative DnaJ genes were identified in Tolypocladium guangdongense, Ophio...
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description | DnaJ is an important molecular chaperone, with significant roles in growth, development, and stress resistance. Studies on the DnaJ gene family in macro-fungi such as Cordyceps spp. s.l. is scare. In this study, 22, 20, and 24 putative DnaJ genes were identified in Tolypocladium guangdongense, Ophiocordyceps sinensis, and C. militaris, respectively. They were classified into four groups based on the presence of the J, zinc finger, and C-terminal domains. We mainly studied the T. guangdongense DnaJ genes being located in the endoplasmic reticulum, cytoplasm, mitochondrion, and nucleus. Phylogenetic analysis revealed gene duplications during the evolutionary process. Multiple cis-elements and transcription factor binding sites were observed in the promoter, suggesting their involvement in the response to multiple stresses. qRT-PCR analysis showed that 63.63% and 45.45% of T. guangdongense DnaJ genes were differentially expressed under cold and heat stress, respectively, indicating their involvement in the response to temperature stress. Many T. guangdongense DnaJ genes in the primordium and fruiting body exhibited differential expression, in comparison to those in the mycelium, suggesting a regulatory role in its growth and development process. These findings will facilitate further functional analysis, and provide information on the classification and conservative functions of DnaJ proteins in macro-fungi. |
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Studies on the DnaJ gene family in macro-fungi such as Cordyceps spp. s.l. is scare. In this study, 22, 20, and 24 putative DnaJ genes were identified in Tolypocladium guangdongense, Ophiocordyceps sinensis, and C. militaris, respectively. They were classified into four groups based on the presence of the J, zinc finger, and C-terminal domains. We mainly studied the T. guangdongense DnaJ genes being located in the endoplasmic reticulum, cytoplasm, mitochondrion, and nucleus. Phylogenetic analysis revealed gene duplications during the evolutionary process. Multiple cis-elements and transcription factor binding sites were observed in the promoter, suggesting their involvement in the response to multiple stresses. qRT-PCR analysis showed that 63.63% and 45.45% of T. guangdongense DnaJ genes were differentially expressed under cold and heat stress, respectively, indicating their involvement in the response to temperature stress. Many T. guangdongense DnaJ genes in the primordium and fruiting body exhibited differential expression, in comparison to those in the mycelium, suggesting a regulatory role in its growth and development process. These findings will facilitate further functional analysis, and provide information on the classification and conservative functions of DnaJ proteins in macro-fungi.</description><identifier>ISSN: 0378-1119</identifier><identifier>EISSN: 1879-0038</identifier><identifier>DOI: 10.1016/j.gene.2020.144563</identifier><identifier>PMID: 32165290</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Cold Temperature - adverse effects ; Cordyceps - genetics ; Cordyceps - growth & development ; Cordyceps s.l ; DnaJ gene ; Expression pattern ; Fruiting Bodies, Fungal - genetics ; Fruiting Bodies, Fungal - growth & development ; Gene Duplication ; Gene Expression Regulation, Developmental ; Gene Expression Regulation, Fungal ; Genes, Fungal - genetics ; Growth and development ; Heat and cold stresses ; HSP40 Heat-Shock Proteins - genetics ; Mycelium - genetics ; Mycelium - growth & development ; Phylogeny ; Thermotolerance - genetics</subject><ispartof>Gene, 2020-06, Vol.743, p.144563-144563, Article 144563</ispartof><rights>2020</rights><rights>Copyright © 2020. Published by Elsevier B.V.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c356t-607cf89e95c1e3287e710f2906320046197dfcaf976f41b1bae1f7ba81adf063</citedby><cites>FETCH-LOGICAL-c356t-607cf89e95c1e3287e710f2906320046197dfcaf976f41b1bae1f7ba81adf063</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0378111920302328$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/32165290$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wang, Gangzheng</creatorcontrib><creatorcontrib>Li, Min</creatorcontrib><creatorcontrib>Cheng, Huijiao</creatorcontrib><creatorcontrib>Zhang, Chenghua</creatorcontrib><creatorcontrib>Deng, Wangqiu</creatorcontrib><creatorcontrib>Li, Taihui</creatorcontrib><title>Expression profiling of Cordyceps DnaJ protein family in Tolypocladium guangdongense during developmental and temperature stress processes</title><title>Gene</title><addtitle>Gene</addtitle><description>DnaJ is an important molecular chaperone, with significant roles in growth, development, and stress resistance. Studies on the DnaJ gene family in macro-fungi such as Cordyceps spp. s.l. is scare. In this study, 22, 20, and 24 putative DnaJ genes were identified in Tolypocladium guangdongense, Ophiocordyceps sinensis, and C. militaris, respectively. They were classified into four groups based on the presence of the J, zinc finger, and C-terminal domains. We mainly studied the T. guangdongense DnaJ genes being located in the endoplasmic reticulum, cytoplasm, mitochondrion, and nucleus. Phylogenetic analysis revealed gene duplications during the evolutionary process. Multiple cis-elements and transcription factor binding sites were observed in the promoter, suggesting their involvement in the response to multiple stresses. qRT-PCR analysis showed that 63.63% and 45.45% of T. guangdongense DnaJ genes were differentially expressed under cold and heat stress, respectively, indicating their involvement in the response to temperature stress. Many T. guangdongense DnaJ genes in the primordium and fruiting body exhibited differential expression, in comparison to those in the mycelium, suggesting a regulatory role in its growth and development process. These findings will facilitate further functional analysis, and provide information on the classification and conservative functions of DnaJ proteins in macro-fungi.</description><subject>Cold Temperature - adverse effects</subject><subject>Cordyceps - genetics</subject><subject>Cordyceps - growth & development</subject><subject>Cordyceps s.l</subject><subject>DnaJ gene</subject><subject>Expression pattern</subject><subject>Fruiting Bodies, Fungal - genetics</subject><subject>Fruiting Bodies, Fungal - growth & development</subject><subject>Gene Duplication</subject><subject>Gene Expression Regulation, Developmental</subject><subject>Gene Expression Regulation, Fungal</subject><subject>Genes, Fungal - genetics</subject><subject>Growth and development</subject><subject>Heat and cold stresses</subject><subject>HSP40 Heat-Shock Proteins - genetics</subject><subject>Mycelium - genetics</subject><subject>Mycelium - growth & development</subject><subject>Phylogeny</subject><subject>Thermotolerance - genetics</subject><issn>0378-1119</issn><issn>1879-0038</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kc9u3CAQxlGUKNmmfYEeKo65eMsf29hSL9UmaRtFymXviIVhxQqDC3bUfYU8dbA2zTFcBg3f_IaZD6GvlKwpoe33w3oPAdaMsJKo66blZ2hFO9FXhPDuHK0IF11FKe2v0KecD6ScpmGX6Ioz2jasJyv0cvdvTJCziwGPKVrnXdjjaPEmJnPUMGZ8G9TD8jaBC9iqwfkjLrdt9Mcxaq-Mmwe8n1XYmxjKjzJgM6cFY-AZfBwHCJPyWAWDJxhGSGqaE-A8LY0Xsi4R8md0YZXP8OUtXqPt_d1287t6fPr1Z_PzsdK8aaeqJULbroe-0RQ46wQISmwZpuWMkLqlvTBWK9uL1tZ0R3cKqBU71VFlbBFdo5sTtjT-O0Oe5OCyBu9VgDhnybgQvC6rokXKTlKdYs4JrByTG1Q6SkrkYoE8yMUCuVggTxaUom9v_Hk3gHkv-b_zIvhxEkAZ8tlBklk7CBqMS6AnaaL7iP8KtHybPA</recordid><startdate>20200615</startdate><enddate>20200615</enddate><creator>Wang, Gangzheng</creator><creator>Li, Min</creator><creator>Cheng, Huijiao</creator><creator>Zhang, Chenghua</creator><creator>Deng, Wangqiu</creator><creator>Li, Taihui</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20200615</creationdate><title>Expression profiling of Cordyceps DnaJ protein family in Tolypocladium guangdongense during developmental and temperature stress processes</title><author>Wang, Gangzheng ; Li, Min ; Cheng, Huijiao ; Zhang, Chenghua ; Deng, Wangqiu ; Li, Taihui</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c356t-607cf89e95c1e3287e710f2906320046197dfcaf976f41b1bae1f7ba81adf063</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Cold Temperature - adverse effects</topic><topic>Cordyceps - genetics</topic><topic>Cordyceps - growth & development</topic><topic>Cordyceps s.l</topic><topic>DnaJ gene</topic><topic>Expression pattern</topic><topic>Fruiting Bodies, Fungal - genetics</topic><topic>Fruiting Bodies, Fungal - growth & development</topic><topic>Gene Duplication</topic><topic>Gene Expression Regulation, Developmental</topic><topic>Gene Expression Regulation, Fungal</topic><topic>Genes, Fungal - genetics</topic><topic>Growth and development</topic><topic>Heat and cold stresses</topic><topic>HSP40 Heat-Shock Proteins - genetics</topic><topic>Mycelium - genetics</topic><topic>Mycelium - growth & development</topic><topic>Phylogeny</topic><topic>Thermotolerance - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wang, Gangzheng</creatorcontrib><creatorcontrib>Li, Min</creatorcontrib><creatorcontrib>Cheng, Huijiao</creatorcontrib><creatorcontrib>Zhang, Chenghua</creatorcontrib><creatorcontrib>Deng, Wangqiu</creatorcontrib><creatorcontrib>Li, Taihui</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Gene</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wang, Gangzheng</au><au>Li, Min</au><au>Cheng, Huijiao</au><au>Zhang, Chenghua</au><au>Deng, Wangqiu</au><au>Li, Taihui</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Expression profiling of Cordyceps DnaJ protein family in Tolypocladium guangdongense during developmental and temperature stress processes</atitle><jtitle>Gene</jtitle><addtitle>Gene</addtitle><date>2020-06-15</date><risdate>2020</risdate><volume>743</volume><spage>144563</spage><epage>144563</epage><pages>144563-144563</pages><artnum>144563</artnum><issn>0378-1119</issn><eissn>1879-0038</eissn><abstract>DnaJ is an important molecular chaperone, with significant roles in growth, development, and stress resistance. Studies on the DnaJ gene family in macro-fungi such as Cordyceps spp. s.l. is scare. In this study, 22, 20, and 24 putative DnaJ genes were identified in Tolypocladium guangdongense, Ophiocordyceps sinensis, and C. militaris, respectively. They were classified into four groups based on the presence of the J, zinc finger, and C-terminal domains. We mainly studied the T. guangdongense DnaJ genes being located in the endoplasmic reticulum, cytoplasm, mitochondrion, and nucleus. Phylogenetic analysis revealed gene duplications during the evolutionary process. Multiple cis-elements and transcription factor binding sites were observed in the promoter, suggesting their involvement in the response to multiple stresses. qRT-PCR analysis showed that 63.63% and 45.45% of T. guangdongense DnaJ genes were differentially expressed under cold and heat stress, respectively, indicating their involvement in the response to temperature stress. Many T. guangdongense DnaJ genes in the primordium and fruiting body exhibited differential expression, in comparison to those in the mycelium, suggesting a regulatory role in its growth and development process. These findings will facilitate further functional analysis, and provide information on the classification and conservative functions of DnaJ proteins in macro-fungi.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>32165290</pmid><doi>10.1016/j.gene.2020.144563</doi><tpages>1</tpages></addata></record> |
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subjects | Cold Temperature - adverse effects Cordyceps - genetics Cordyceps - growth & development Cordyceps s.l DnaJ gene Expression pattern Fruiting Bodies, Fungal - genetics Fruiting Bodies, Fungal - growth & development Gene Duplication Gene Expression Regulation, Developmental Gene Expression Regulation, Fungal Genes, Fungal - genetics Growth and development Heat and cold stresses HSP40 Heat-Shock Proteins - genetics Mycelium - genetics Mycelium - growth & development Phylogeny Thermotolerance - genetics |
title | Expression profiling of Cordyceps DnaJ protein family in Tolypocladium guangdongense during developmental and temperature stress processes |
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