T‐cell receptor diversity as a prognostic biomarker in melanoma patients
There is increasing evidence that T‐cell receptor (TCR) repertoire diversity can be a predictive biomarker of immune responses in cancer patients. However, the characteristics of the T‐cell repertoire together with its prognostic significance in melanoma patients and impact on disease progression re...
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Veröffentlicht in: | Pigment Cell & melanoma research 2020-07, Vol.33 (4), p.612-624 |
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container_title | Pigment Cell & melanoma research |
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creator | Charles, Julie Mouret, Stephane Challende, Isabelle Leccia, Marie‐Therese De Fraipont, Florence Perez, Solene Plantier, Nadia Plumas, Joel Manuel, Manuarii Chaperot, Laurence Aspord, Caroline |
description | There is increasing evidence that T‐cell receptor (TCR) repertoire diversity can be a predictive biomarker of immune responses in cancer patients. However, the characteristics of the T‐cell repertoire together with its prognostic significance in melanoma patients and impact on disease progression remain unknown. We investigated the combinatorial TCR repertoire diversity by semi‐quantitative multi‐N‐plex PCR in peripheral blood samples from 44 melanoma patients together with seven matched metastatic lymph nodes and explored its potential predictive value on clinical prognosis. The diversity was quantified by calculating both richness (number of different specificities) and evenness (relative abundance of the different specificities). Our results revealed that a higher TCR repertoire diversity in blood of patients was associated with a longer PFS, while divpenia (low repertoire diversity) was linked with poor prognosis. The diversity was significantly higher in patients undergoing late relapse and long survival compared to patients who progressed rapidly. Interestingly, the TCR repertoire diversity in tumor may have a potential prognostic value. Thus, our study highlights that the TCR repertoire diversity is a prognostic indicator of clinical outcome in patients with melanoma. |
doi_str_mv | 10.1111/pcmr.12866 |
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However, the characteristics of the T‐cell repertoire together with its prognostic significance in melanoma patients and impact on disease progression remain unknown. We investigated the combinatorial TCR repertoire diversity by semi‐quantitative multi‐N‐plex PCR in peripheral blood samples from 44 melanoma patients together with seven matched metastatic lymph nodes and explored its potential predictive value on clinical prognosis. The diversity was quantified by calculating both richness (number of different specificities) and evenness (relative abundance of the different specificities). Our results revealed that a higher TCR repertoire diversity in blood of patients was associated with a longer PFS, while divpenia (low repertoire diversity) was linked with poor prognosis. The diversity was significantly higher in patients undergoing late relapse and long survival compared to patients who progressed rapidly. Interestingly, the TCR repertoire diversity in tumor may have a potential prognostic value. Thus, our study highlights that the TCR repertoire diversity is a prognostic indicator of clinical outcome in patients with melanoma.</description><identifier>ISSN: 1755-1471</identifier><identifier>EISSN: 1755-148X</identifier><identifier>DOI: 10.1111/pcmr.12866</identifier><identifier>PMID: 31971658</identifier><language>eng</language><publisher>England: Wiley Subscription Services, Inc</publisher><subject>Biomarkers ; Blood ; clinical outcome ; Combinatorial analysis ; Immune response ; Immunology ; Life Sciences ; Lymph nodes ; Medical prognosis ; Melanoma ; Metastases ; patients ; Peripheral blood ; Prognosis ; prognostic biomarker ; Receptors ; Relative abundance ; T cell receptors ; TCR diversity ; T‐cell repertoire</subject><ispartof>Pigment Cell & melanoma research, 2020-07, Vol.33 (4), p.612-624</ispartof><rights>2020 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd</rights><rights>2020 John Wiley & Sons A/S. Published by John Wiley & Sons Ltd.</rights><rights>Copyright © 2020 John Wiley & Sons A/S</rights><rights>Distributed under a Creative Commons Attribution 4.0 International License</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3916-d6f5ff7b80dd9cb7c5cf6dce21154727052a02c67a434eda1fca0612e6f49c533</citedby><cites>FETCH-LOGICAL-c3916-d6f5ff7b80dd9cb7c5cf6dce21154727052a02c67a434eda1fca0612e6f49c533</cites><orcidid>0000-0002-4979-7044 ; 0000-0002-1479-9410 ; 0000-0002-5005-4301</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fpcmr.12866$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fpcmr.12866$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,885,1417,27924,27925,45574,45575</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31971658$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink><backlink>$$Uhttps://hal.science/hal-03329074$$DView record in HAL$$Hfree_for_read</backlink></links><search><creatorcontrib>Charles, Julie</creatorcontrib><creatorcontrib>Mouret, Stephane</creatorcontrib><creatorcontrib>Challende, Isabelle</creatorcontrib><creatorcontrib>Leccia, Marie‐Therese</creatorcontrib><creatorcontrib>De Fraipont, Florence</creatorcontrib><creatorcontrib>Perez, Solene</creatorcontrib><creatorcontrib>Plantier, Nadia</creatorcontrib><creatorcontrib>Plumas, Joel</creatorcontrib><creatorcontrib>Manuel, Manuarii</creatorcontrib><creatorcontrib>Chaperot, Laurence</creatorcontrib><creatorcontrib>Aspord, Caroline</creatorcontrib><title>T‐cell receptor diversity as a prognostic biomarker in melanoma patients</title><title>Pigment Cell & melanoma research</title><addtitle>Pigment Cell Melanoma Res</addtitle><description>There is increasing evidence that T‐cell receptor (TCR) repertoire diversity can be a predictive biomarker of immune responses in cancer patients. However, the characteristics of the T‐cell repertoire together with its prognostic significance in melanoma patients and impact on disease progression remain unknown. We investigated the combinatorial TCR repertoire diversity by semi‐quantitative multi‐N‐plex PCR in peripheral blood samples from 44 melanoma patients together with seven matched metastatic lymph nodes and explored its potential predictive value on clinical prognosis. The diversity was quantified by calculating both richness (number of different specificities) and evenness (relative abundance of the different specificities). Our results revealed that a higher TCR repertoire diversity in blood of patients was associated with a longer PFS, while divpenia (low repertoire diversity) was linked with poor prognosis. The diversity was significantly higher in patients undergoing late relapse and long survival compared to patients who progressed rapidly. Interestingly, the TCR repertoire diversity in tumor may have a potential prognostic value. Thus, our study highlights that the TCR repertoire diversity is a prognostic indicator of clinical outcome in patients with melanoma.</description><subject>Biomarkers</subject><subject>Blood</subject><subject>clinical outcome</subject><subject>Combinatorial analysis</subject><subject>Immune response</subject><subject>Immunology</subject><subject>Life Sciences</subject><subject>Lymph nodes</subject><subject>Medical prognosis</subject><subject>Melanoma</subject><subject>Metastases</subject><subject>patients</subject><subject>Peripheral blood</subject><subject>Prognosis</subject><subject>prognostic biomarker</subject><subject>Receptors</subject><subject>Relative abundance</subject><subject>T cell receptors</subject><subject>TCR diversity</subject><subject>T‐cell repertoire</subject><issn>1755-1471</issn><issn>1755-148X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><recordid>eNp9kctKAzEUhoMotl42PoAE3KjQmntmllK8UlFEwV1IMxlNnZvJVOnOR_AZfRJTR7tw4dnknPDxc_7zA7CD0RDHOmpM6YeYJEKsgD6WnA8wSx5Wl73EPbARwhQhgXhK10GP4lRiwZM-uLz7fP8wtiigt8Y2be1h5l6tD66dQx2gho2vH6s6tM7AiatL7Z-th66CpS10FWfY6NbZqg1bYC3XRbDbP-8muD89uRudD8bXZxej4_HA0BSLQSZynudykqAsS81EGm5ykRlLMOZMEok40YgYITWjzGYa50YjgYkVOUsNp3QTHHS6T7pQjXdxpbmqtVPnx2O1-EOUkhRJ9ooju9-x0cXLzIZWlS4s7OrK1rOgCGWM0HiVJKJ7f9BpPfNVdKIIQwmTFEkUqcOOMr4Owdt8uQFGapGGWqShvtOI8O6P5GxS2myJ_p4_ArgD3lxh5_9IqZvR1W0n-gV6h5Su</recordid><startdate>202007</startdate><enddate>202007</enddate><creator>Charles, Julie</creator><creator>Mouret, Stephane</creator><creator>Challende, Isabelle</creator><creator>Leccia, Marie‐Therese</creator><creator>De Fraipont, Florence</creator><creator>Perez, Solene</creator><creator>Plantier, Nadia</creator><creator>Plumas, Joel</creator><creator>Manuel, Manuarii</creator><creator>Chaperot, Laurence</creator><creator>Aspord, Caroline</creator><general>Wiley Subscription Services, Inc</general><general>Blackwell Munksgaard</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>7TO</scope><scope>8FD</scope><scope>FR3</scope><scope>H94</scope><scope>K9.</scope><scope>P64</scope><scope>7X8</scope><scope>1XC</scope><orcidid>https://orcid.org/0000-0002-4979-7044</orcidid><orcidid>https://orcid.org/0000-0002-1479-9410</orcidid><orcidid>https://orcid.org/0000-0002-5005-4301</orcidid></search><sort><creationdate>202007</creationdate><title>T‐cell receptor diversity as a prognostic biomarker in melanoma patients</title><author>Charles, Julie ; Mouret, Stephane ; Challende, Isabelle ; Leccia, Marie‐Therese ; De Fraipont, Florence ; Perez, Solene ; Plantier, Nadia ; Plumas, Joel ; Manuel, Manuarii ; Chaperot, Laurence ; Aspord, Caroline</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3916-d6f5ff7b80dd9cb7c5cf6dce21154727052a02c67a434eda1fca0612e6f49c533</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Biomarkers</topic><topic>Blood</topic><topic>clinical outcome</topic><topic>Combinatorial analysis</topic><topic>Immune response</topic><topic>Immunology</topic><topic>Life Sciences</topic><topic>Lymph nodes</topic><topic>Medical prognosis</topic><topic>Melanoma</topic><topic>Metastases</topic><topic>patients</topic><topic>Peripheral blood</topic><topic>Prognosis</topic><topic>prognostic biomarker</topic><topic>Receptors</topic><topic>Relative abundance</topic><topic>T cell receptors</topic><topic>TCR diversity</topic><topic>T‐cell repertoire</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Charles, Julie</creatorcontrib><creatorcontrib>Mouret, Stephane</creatorcontrib><creatorcontrib>Challende, Isabelle</creatorcontrib><creatorcontrib>Leccia, Marie‐Therese</creatorcontrib><creatorcontrib>De Fraipont, Florence</creatorcontrib><creatorcontrib>Perez, Solene</creatorcontrib><creatorcontrib>Plantier, Nadia</creatorcontrib><creatorcontrib>Plumas, Joel</creatorcontrib><creatorcontrib>Manuel, Manuarii</creatorcontrib><creatorcontrib>Chaperot, Laurence</creatorcontrib><creatorcontrib>Aspord, Caroline</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><collection>Hyper Article en Ligne (HAL)</collection><jtitle>Pigment Cell & melanoma research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Charles, Julie</au><au>Mouret, Stephane</au><au>Challende, Isabelle</au><au>Leccia, Marie‐Therese</au><au>De Fraipont, Florence</au><au>Perez, Solene</au><au>Plantier, Nadia</au><au>Plumas, Joel</au><au>Manuel, Manuarii</au><au>Chaperot, Laurence</au><au>Aspord, Caroline</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>T‐cell receptor diversity as a prognostic biomarker in melanoma patients</atitle><jtitle>Pigment Cell & melanoma research</jtitle><addtitle>Pigment Cell Melanoma Res</addtitle><date>2020-07</date><risdate>2020</risdate><volume>33</volume><issue>4</issue><spage>612</spage><epage>624</epage><pages>612-624</pages><issn>1755-1471</issn><eissn>1755-148X</eissn><abstract>There is increasing evidence that T‐cell receptor (TCR) repertoire diversity can be a predictive biomarker of immune responses in cancer patients. However, the characteristics of the T‐cell repertoire together with its prognostic significance in melanoma patients and impact on disease progression remain unknown. We investigated the combinatorial TCR repertoire diversity by semi‐quantitative multi‐N‐plex PCR in peripheral blood samples from 44 melanoma patients together with seven matched metastatic lymph nodes and explored its potential predictive value on clinical prognosis. The diversity was quantified by calculating both richness (number of different specificities) and evenness (relative abundance of the different specificities). Our results revealed that a higher TCR repertoire diversity in blood of patients was associated with a longer PFS, while divpenia (low repertoire diversity) was linked with poor prognosis. The diversity was significantly higher in patients undergoing late relapse and long survival compared to patients who progressed rapidly. Interestingly, the TCR repertoire diversity in tumor may have a potential prognostic value. Thus, our study highlights that the TCR repertoire diversity is a prognostic indicator of clinical outcome in patients with melanoma.</abstract><cop>England</cop><pub>Wiley Subscription Services, Inc</pub><pmid>31971658</pmid><doi>10.1111/pcmr.12866</doi><tpages>13</tpages><orcidid>https://orcid.org/0000-0002-4979-7044</orcidid><orcidid>https://orcid.org/0000-0002-1479-9410</orcidid><orcidid>https://orcid.org/0000-0002-5005-4301</orcidid></addata></record> |
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subjects | Biomarkers Blood clinical outcome Combinatorial analysis Immune response Immunology Life Sciences Lymph nodes Medical prognosis Melanoma Metastases patients Peripheral blood Prognosis prognostic biomarker Receptors Relative abundance T cell receptors TCR diversity T‐cell repertoire |
title | T‐cell receptor diversity as a prognostic biomarker in melanoma patients |
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