Promising Terpenes as Natural Antagonists of Cancer: An In-Silico Approach
Overexpression of murine double minute 2 (MDM2) results in the inactivation of p53 and causes cancer which is a leading cause of death in recent era. In recent decades, much attention has been paid to discover potential inhibitors against MDM2 in order to cure cancer. Outcomes from studies proposes...
Gespeichert in:
Veröffentlicht in: | Molecules (Basel, Switzerland) Switzerland), 2019-12, Vol.25 (1), p.155 |
---|---|
Hauptverfasser: | , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | |
---|---|
container_issue | 1 |
container_start_page | 155 |
container_title | Molecules (Basel, Switzerland) |
container_volume | 25 |
creator | Muhseen, Ziyad Tariq Li, Guanglin |
description | Overexpression of murine double minute 2 (MDM2) results in the inactivation of p53 and causes cancer which is a leading cause of death in recent era. In recent decades, much attention has been paid to discover potential inhibitors against MDM2 in order to cure cancer. Outcomes from studies proposes that the MDM2 is a hot target to screen potent antagonists. Thus, this study aims at discovering natural compounds using several computational approaches to inhibit the MDM2 and to eliminate p53-MDM2 interaction, which would result in the reactivation of p53 activity. A library of 500 terpenes was prepared and several virtual screening approaches were employed to find out the best hits which could serve as p53-MDM2 antagonists. On the basis of the designed protocol, three terpenes were selected. In the present study, for the stability and validation of selected three protein-ligand complexes 20 ns molecular dynamics simulations and principal component analyses (PCA) were performed. Results found that the selected terpenes hits (3-
-
-coumaroyl maslinic acid, Silvestrol and Betulonic acid) are potential inhibitors of p53-MDM2 interaction and could serve as potent antagonists. |
doi_str_mv | 10.3390/molecules25010155 |
format | Article |
fullrecord | <record><control><sourceid>proquest_doaj_</sourceid><recordid>TN_cdi_proquest_miscellaneous_2334234141</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><doaj_id>oai_doaj_org_article_8709430ea3ea490e958c0c3b298befb4</doaj_id><sourcerecordid>2334234141</sourcerecordid><originalsourceid>FETCH-LOGICAL-c493t-d31eb3bdd21f3769e310ee348d702574245fed3a57962f5bd72d57d66d9d23f83</originalsourceid><addsrcrecordid>eNplkU9v1DAQxSMEon_gA3BBkbj0ErA9dhxzQFqtaFlUARLlbDn2ZOtV1g52gsS3r8uWqoXTjMZvfvK8V1WvKHkLoMi7fRzRLiNmJgglVIgn1THljDRAuHr6oD-qTnLeEcIop-J5dQRUkZYAO64-f0tx77MP2_oK04QBc21y_cXMSzJjvQqz2cbg85zrONRrEyym92Vcb0Lz3Y_exno1TSkae_2iejaYMePLu3pa_Tj_eLX-1Fx-vdisV5eN5QrmxgHFHnrnGB1AtgqBEkTgnZOECckZFwM6MEKqlg2id5I5IV3bOuUYDB2cVpsD10Wz01Pye5N-62i8_jOIaatNmr0dUXeSKA4EDaDhiqASnSUWeqa6HoeeF9aHA2ta-j06i2EuZz-CPn4J_lpv4y_dqg4I3ALO7gAp_lwwz7q4aXEcTcC4ZM0AOANefC_SN_9Id3FJoVilmRAlG8mpLCp6UNkUc0443H-GEn2buv4v9bLz-uEV9xt_Y4YbwXOpcw</addsrcrecordid><sourcetype>Open Website</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2550217417</pqid></control><display><type>article</type><title>Promising Terpenes as Natural Antagonists of Cancer: An In-Silico Approach</title><source>DOAJ Directory of Open Access Journals</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>MDPI - Multidisciplinary Digital Publishing Institute</source><source>PubMed Central</source><source>Free Full-Text Journals in Chemistry</source><creator>Muhseen, Ziyad Tariq ; Li, Guanglin</creator><creatorcontrib>Muhseen, Ziyad Tariq ; Li, Guanglin</creatorcontrib><description>Overexpression of murine double minute 2 (MDM2) results in the inactivation of p53 and causes cancer which is a leading cause of death in recent era. In recent decades, much attention has been paid to discover potential inhibitors against MDM2 in order to cure cancer. Outcomes from studies proposes that the MDM2 is a hot target to screen potent antagonists. Thus, this study aims at discovering natural compounds using several computational approaches to inhibit the MDM2 and to eliminate p53-MDM2 interaction, which would result in the reactivation of p53 activity. A library of 500 terpenes was prepared and several virtual screening approaches were employed to find out the best hits which could serve as p53-MDM2 antagonists. On the basis of the designed protocol, three terpenes were selected. In the present study, for the stability and validation of selected three protein-ligand complexes 20 ns molecular dynamics simulations and principal component analyses (PCA) were performed. Results found that the selected terpenes hits (3-
-
-coumaroyl maslinic acid, Silvestrol and Betulonic acid) are potential inhibitors of p53-MDM2 interaction and could serve as potent antagonists.</description><identifier>ISSN: 1420-3049</identifier><identifier>EISSN: 1420-3049</identifier><identifier>DOI: 10.3390/molecules25010155</identifier><identifier>PMID: 31906032</identifier><language>eng</language><publisher>Switzerland: MDPI AG</publisher><subject>Cancer ; Cell cycle ; computational analyses ; Computer applications ; DNA damage ; Dynamic stability ; Herbal medicine ; Inactivation ; Inhibitors ; Ligands ; MDM2 protein ; Metabolites ; Molecular dynamics ; Mutation ; natural compounds ; p53 Protein ; p53-mdm2 ; Polymorphism ; Principal components analysis ; Proteins ; terpenes ; Tumors</subject><ispartof>Molecules (Basel, Switzerland), 2019-12, Vol.25 (1), p.155</ispartof><rights>2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). Notwithstanding the ProQuest Terms and Conditions, you may use this content in accordance with the terms of the License.</rights><rights>2019 by the authors. 2019</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c493t-d31eb3bdd21f3769e310ee348d702574245fed3a57962f5bd72d57d66d9d23f83</citedby><cites>FETCH-LOGICAL-c493t-d31eb3bdd21f3769e310ee348d702574245fed3a57962f5bd72d57d66d9d23f83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6983034/pdf/$$EPDF$$P50$$Gpubmedcentral$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC6983034/$$EHTML$$P50$$Gpubmedcentral$$Hfree_for_read</linktohtml><link.rule.ids>230,314,727,780,784,864,885,2102,27924,27925,53791,53793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31906032$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Muhseen, Ziyad Tariq</creatorcontrib><creatorcontrib>Li, Guanglin</creatorcontrib><title>Promising Terpenes as Natural Antagonists of Cancer: An In-Silico Approach</title><title>Molecules (Basel, Switzerland)</title><addtitle>Molecules</addtitle><description>Overexpression of murine double minute 2 (MDM2) results in the inactivation of p53 and causes cancer which is a leading cause of death in recent era. In recent decades, much attention has been paid to discover potential inhibitors against MDM2 in order to cure cancer. Outcomes from studies proposes that the MDM2 is a hot target to screen potent antagonists. Thus, this study aims at discovering natural compounds using several computational approaches to inhibit the MDM2 and to eliminate p53-MDM2 interaction, which would result in the reactivation of p53 activity. A library of 500 terpenes was prepared and several virtual screening approaches were employed to find out the best hits which could serve as p53-MDM2 antagonists. On the basis of the designed protocol, three terpenes were selected. In the present study, for the stability and validation of selected three protein-ligand complexes 20 ns molecular dynamics simulations and principal component analyses (PCA) were performed. Results found that the selected terpenes hits (3-
-
-coumaroyl maslinic acid, Silvestrol and Betulonic acid) are potential inhibitors of p53-MDM2 interaction and could serve as potent antagonists.</description><subject>Cancer</subject><subject>Cell cycle</subject><subject>computational analyses</subject><subject>Computer applications</subject><subject>DNA damage</subject><subject>Dynamic stability</subject><subject>Herbal medicine</subject><subject>Inactivation</subject><subject>Inhibitors</subject><subject>Ligands</subject><subject>MDM2 protein</subject><subject>Metabolites</subject><subject>Molecular dynamics</subject><subject>Mutation</subject><subject>natural compounds</subject><subject>p53 Protein</subject><subject>p53-mdm2</subject><subject>Polymorphism</subject><subject>Principal components analysis</subject><subject>Proteins</subject><subject>terpenes</subject><subject>Tumors</subject><issn>1420-3049</issn><issn>1420-3049</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>DOA</sourceid><recordid>eNplkU9v1DAQxSMEon_gA3BBkbj0ErA9dhxzQFqtaFlUARLlbDn2ZOtV1g52gsS3r8uWqoXTjMZvfvK8V1WvKHkLoMi7fRzRLiNmJgglVIgn1THljDRAuHr6oD-qTnLeEcIop-J5dQRUkZYAO64-f0tx77MP2_oK04QBc21y_cXMSzJjvQqz2cbg85zrONRrEyym92Vcb0Lz3Y_exno1TSkae_2iejaYMePLu3pa_Tj_eLX-1Fx-vdisV5eN5QrmxgHFHnrnGB1AtgqBEkTgnZOECckZFwM6MEKqlg2id5I5IV3bOuUYDB2cVpsD10Wz01Pye5N-62i8_jOIaatNmr0dUXeSKA4EDaDhiqASnSUWeqa6HoeeF9aHA2ta-j06i2EuZz-CPn4J_lpv4y_dqg4I3ALO7gAp_lwwz7q4aXEcTcC4ZM0AOANefC_SN_9Id3FJoVilmRAlG8mpLCp6UNkUc0443H-GEn2buv4v9bLz-uEV9xt_Y4YbwXOpcw</recordid><startdate>20191230</startdate><enddate>20191230</enddate><creator>Muhseen, Ziyad Tariq</creator><creator>Li, Guanglin</creator><general>MDPI AG</general><general>MDPI</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>K9.</scope><scope>M0S</scope><scope>M1P</scope><scope>PIMPY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>7X8</scope><scope>5PM</scope><scope>DOA</scope></search><sort><creationdate>20191230</creationdate><title>Promising Terpenes as Natural Antagonists of Cancer: An In-Silico Approach</title><author>Muhseen, Ziyad Tariq ; Li, Guanglin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c493t-d31eb3bdd21f3769e310ee348d702574245fed3a57962f5bd72d57d66d9d23f83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Cancer</topic><topic>Cell cycle</topic><topic>computational analyses</topic><topic>Computer applications</topic><topic>DNA damage</topic><topic>Dynamic stability</topic><topic>Herbal medicine</topic><topic>Inactivation</topic><topic>Inhibitors</topic><topic>Ligands</topic><topic>MDM2 protein</topic><topic>Metabolites</topic><topic>Molecular dynamics</topic><topic>Mutation</topic><topic>natural compounds</topic><topic>p53 Protein</topic><topic>p53-mdm2</topic><topic>Polymorphism</topic><topic>Principal components analysis</topic><topic>Proteins</topic><topic>terpenes</topic><topic>Tumors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Muhseen, Ziyad Tariq</creatorcontrib><creatorcontrib>Li, Guanglin</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Publicly Available Content Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><collection>DOAJ Directory of Open Access Journals</collection><jtitle>Molecules (Basel, Switzerland)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Muhseen, Ziyad Tariq</au><au>Li, Guanglin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Promising Terpenes as Natural Antagonists of Cancer: An In-Silico Approach</atitle><jtitle>Molecules (Basel, Switzerland)</jtitle><addtitle>Molecules</addtitle><date>2019-12-30</date><risdate>2019</risdate><volume>25</volume><issue>1</issue><spage>155</spage><pages>155-</pages><issn>1420-3049</issn><eissn>1420-3049</eissn><abstract>Overexpression of murine double minute 2 (MDM2) results in the inactivation of p53 and causes cancer which is a leading cause of death in recent era. In recent decades, much attention has been paid to discover potential inhibitors against MDM2 in order to cure cancer. Outcomes from studies proposes that the MDM2 is a hot target to screen potent antagonists. Thus, this study aims at discovering natural compounds using several computational approaches to inhibit the MDM2 and to eliminate p53-MDM2 interaction, which would result in the reactivation of p53 activity. A library of 500 terpenes was prepared and several virtual screening approaches were employed to find out the best hits which could serve as p53-MDM2 antagonists. On the basis of the designed protocol, three terpenes were selected. In the present study, for the stability and validation of selected three protein-ligand complexes 20 ns molecular dynamics simulations and principal component analyses (PCA) were performed. Results found that the selected terpenes hits (3-
-
-coumaroyl maslinic acid, Silvestrol and Betulonic acid) are potential inhibitors of p53-MDM2 interaction and could serve as potent antagonists.</abstract><cop>Switzerland</cop><pub>MDPI AG</pub><pmid>31906032</pmid><doi>10.3390/molecules25010155</doi><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 1420-3049 |
ispartof | Molecules (Basel, Switzerland), 2019-12, Vol.25 (1), p.155 |
issn | 1420-3049 1420-3049 |
language | eng |
recordid | cdi_proquest_miscellaneous_2334234141 |
source | DOAJ Directory of Open Access Journals; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; MDPI - Multidisciplinary Digital Publishing Institute; PubMed Central; Free Full-Text Journals in Chemistry |
subjects | Cancer Cell cycle computational analyses Computer applications DNA damage Dynamic stability Herbal medicine Inactivation Inhibitors Ligands MDM2 protein Metabolites Molecular dynamics Mutation natural compounds p53 Protein p53-mdm2 Polymorphism Principal components analysis Proteins terpenes Tumors |
title | Promising Terpenes as Natural Antagonists of Cancer: An In-Silico Approach |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-06T04%3A35%3A09IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_doaj_&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Promising%20Terpenes%20as%20Natural%20Antagonists%20of%20Cancer:%20An%20In-Silico%20Approach&rft.jtitle=Molecules%20(Basel,%20Switzerland)&rft.au=Muhseen,%20Ziyad%20Tariq&rft.date=2019-12-30&rft.volume=25&rft.issue=1&rft.spage=155&rft.pages=155-&rft.issn=1420-3049&rft.eissn=1420-3049&rft_id=info:doi/10.3390/molecules25010155&rft_dat=%3Cproquest_doaj_%3E2334234141%3C/proquest_doaj_%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2550217417&rft_id=info:pmid/31906032&rft_doaj_id=oai_doaj_org_article_8709430ea3ea490e958c0c3b298befb4&rfr_iscdi=true |