Proximity Binding-Triggered Assembly of Two MNAzymes for Catalyzed Release of G‑Quadruplex DNAzymes and an Ultrasensitive Homogeneous Bioassay of Platelet-Derived Growth Factor
When the target biorecognition-triggered assembly of two Mg2+-dependent DNAzymes (MNAzymes) is employed for dually catalytic release of peroxidase-mimicking G-quadruplex DNAzymes (G-DNAzymes), this work develops a novel homogeneous colorimetric method for an ultrasensitive bioassay of platelet-deriv...
Gespeichert in:
Veröffentlicht in: | Analytical chemistry (Washington) 2020-01, Vol.92 (1), p.593-598 |
---|---|
Hauptverfasser: | , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 598 |
---|---|
container_issue | 1 |
container_start_page | 593 |
container_title | Analytical chemistry (Washington) |
container_volume | 92 |
creator | Xie, Yiming Niu, Feina Yu, Aimin Lai, Guosong |
description | When the target biorecognition-triggered assembly of two Mg2+-dependent DNAzymes (MNAzymes) is employed for dually catalytic release of peroxidase-mimicking G-quadruplex DNAzymes (G-DNAzymes), this work develops a novel homogeneous colorimetric method for an ultrasensitive bioassay of platelet-derived growth factor-BB (PDGF-BB). The first MNAzyme assembly is realized through a highly specific aptamer biorecognition-driven proximity ligation reaction. Its catalytic cleavage toward the two designed hairpin substrates not only releases a large amount of G-DNAzymes for colorimetric signal transduction but also enables the spontaneous assembly of another MNAzyme for signal amplification. This leads to the successful detection of PDGF-BB in a wide linear range from 2.0 pg mL–1 to 20 ng mL–1 with a very low detection down to 0.088 pg mL–1. As the whole reactions including aptamer biorecognitions, DNA hybridizations, and catalytic cleavages of MNAzymes are conducted in a homogeneous solution, this method has very simple manipulations and also has high repeatability. In addition, the high specificity of the aptamer biorecognition-triggered signal transduction decides the excellent selectivity of the method. This bioassay does not require an expensive instrument and nucleic acid labeling for signal readout or any nanomaterial, enzyme, or nuclease for signal amplification. Thus, it displays an extensive potential for clinical diagnostic applications. |
doi_str_mv | 10.1021/acs.analchem.9b05002 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_2329732360</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2329732360</sourcerecordid><originalsourceid>FETCH-LOGICAL-a422t-f1d325c31ac685ec2a06d25d3610d9a1dd6546fa13cd8091b43cb47e8f7c11b53</originalsourceid><addsrcrecordid>eNp9kUFuEzEYhS0EoqFwA4QssWEz4bc99kyWIaUpUoGC0vXIY3vSqTzj1PbQTldcgatwJE6C0yRdsGBh_ZvvvWfpQ-g1gSkBSt5LFaayl1ZdmW46q4ED0CdoQjiFTJQlfYomAMAyWgAcoRchXAMQAkQ8R0eMlJznMJug3xfe3bVdG0f8oe1126-zlW_Xa-ONxvMQTFfbEbsGr24d_vxlfj92JuDGebyQUdrxPmHfjTUymC21_PPz17dBaj9srLnDJ4eA7HV6-NJGn8g-tLH9YfCZ69za9MYNIa07GYJ82LqwMqbOmJ0YnziNl97dxit8KlV0_iV61kgbzKv9PUaXpx9Xi7Ps_Ovy02J-nsmc0pg1RDPKFSNSiZIbRSUITblmgoCeSaK14LloJGFKlzAjdc5UnRembApFSM3ZMXq36914dzOYEKuuDcpYKx9-XFFGZwWjTEBC3_6DXrvBJzlbinEhGKFFovIdpbwLwZum2vi2k36sCFRbp1VyWh2cVnunKfZmXz7UndGPoYPEBMAO2MYfh__b-RfMsLRK</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2335663127</pqid></control><display><type>article</type><title>Proximity Binding-Triggered Assembly of Two MNAzymes for Catalyzed Release of G‑Quadruplex DNAzymes and an Ultrasensitive Homogeneous Bioassay of Platelet-Derived Growth Factor</title><source>MEDLINE</source><source>ACS Publications</source><creator>Xie, Yiming ; Niu, Feina ; Yu, Aimin ; Lai, Guosong</creator><creatorcontrib>Xie, Yiming ; Niu, Feina ; Yu, Aimin ; Lai, Guosong</creatorcontrib><description>When the target biorecognition-triggered assembly of two Mg2+-dependent DNAzymes (MNAzymes) is employed for dually catalytic release of peroxidase-mimicking G-quadruplex DNAzymes (G-DNAzymes), this work develops a novel homogeneous colorimetric method for an ultrasensitive bioassay of platelet-derived growth factor-BB (PDGF-BB). The first MNAzyme assembly is realized through a highly specific aptamer biorecognition-driven proximity ligation reaction. Its catalytic cleavage toward the two designed hairpin substrates not only releases a large amount of G-DNAzymes for colorimetric signal transduction but also enables the spontaneous assembly of another MNAzyme for signal amplification. This leads to the successful detection of PDGF-BB in a wide linear range from 2.0 pg mL–1 to 20 ng mL–1 with a very low detection down to 0.088 pg mL–1. As the whole reactions including aptamer biorecognitions, DNA hybridizations, and catalytic cleavages of MNAzymes are conducted in a homogeneous solution, this method has very simple manipulations and also has high repeatability. In addition, the high specificity of the aptamer biorecognition-triggered signal transduction decides the excellent selectivity of the method. This bioassay does not require an expensive instrument and nucleic acid labeling for signal readout or any nanomaterial, enzyme, or nuclease for signal amplification. Thus, it displays an extensive potential for clinical diagnostic applications.</description><identifier>ISSN: 0003-2700</identifier><identifier>EISSN: 1520-6882</identifier><identifier>DOI: 10.1021/acs.analchem.9b05002</identifier><identifier>PMID: 31855409</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Amplification ; Analytical chemistry ; Aptamers ; Assembly ; Bioassays ; Biocatalysis ; Chemistry ; Colorimetry ; Deoxyribonucleic acid ; Diagnostic software ; Diagnostic systems ; DNA ; DNA, Catalytic - metabolism ; G-Quadruplexes ; Growth factors ; Humans ; Magnesium ; Magnesium - metabolism ; Mimicry ; Nanomaterials ; Nuclease ; Nucleic acids ; Peroxidase ; Platelet-derived growth factor ; Platelet-Derived Growth Factor - analysis ; Platelet-Derived Growth Factor - metabolism ; Platelet-derived growth factor BB ; Selectivity ; Signal transduction ; Substrates</subject><ispartof>Analytical chemistry (Washington), 2020-01, Vol.92 (1), p.593-598</ispartof><rights>Copyright American Chemical Society Jan 7, 2020</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a422t-f1d325c31ac685ec2a06d25d3610d9a1dd6546fa13cd8091b43cb47e8f7c11b53</citedby><cites>FETCH-LOGICAL-a422t-f1d325c31ac685ec2a06d25d3610d9a1dd6546fa13cd8091b43cb47e8f7c11b53</cites><orcidid>0000-0002-8083-1378</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/acs.analchem.9b05002$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/acs.analchem.9b05002$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>314,776,780,2751,27055,27903,27904,56717,56767</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31855409$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Xie, Yiming</creatorcontrib><creatorcontrib>Niu, Feina</creatorcontrib><creatorcontrib>Yu, Aimin</creatorcontrib><creatorcontrib>Lai, Guosong</creatorcontrib><title>Proximity Binding-Triggered Assembly of Two MNAzymes for Catalyzed Release of G‑Quadruplex DNAzymes and an Ultrasensitive Homogeneous Bioassay of Platelet-Derived Growth Factor</title><title>Analytical chemistry (Washington)</title><addtitle>Anal. Chem</addtitle><description>When the target biorecognition-triggered assembly of two Mg2+-dependent DNAzymes (MNAzymes) is employed for dually catalytic release of peroxidase-mimicking G-quadruplex DNAzymes (G-DNAzymes), this work develops a novel homogeneous colorimetric method for an ultrasensitive bioassay of platelet-derived growth factor-BB (PDGF-BB). The first MNAzyme assembly is realized through a highly specific aptamer biorecognition-driven proximity ligation reaction. Its catalytic cleavage toward the two designed hairpin substrates not only releases a large amount of G-DNAzymes for colorimetric signal transduction but also enables the spontaneous assembly of another MNAzyme for signal amplification. This leads to the successful detection of PDGF-BB in a wide linear range from 2.0 pg mL–1 to 20 ng mL–1 with a very low detection down to 0.088 pg mL–1. As the whole reactions including aptamer biorecognitions, DNA hybridizations, and catalytic cleavages of MNAzymes are conducted in a homogeneous solution, this method has very simple manipulations and also has high repeatability. In addition, the high specificity of the aptamer biorecognition-triggered signal transduction decides the excellent selectivity of the method. This bioassay does not require an expensive instrument and nucleic acid labeling for signal readout or any nanomaterial, enzyme, or nuclease for signal amplification. Thus, it displays an extensive potential for clinical diagnostic applications.</description><subject>Amplification</subject><subject>Analytical chemistry</subject><subject>Aptamers</subject><subject>Assembly</subject><subject>Bioassays</subject><subject>Biocatalysis</subject><subject>Chemistry</subject><subject>Colorimetry</subject><subject>Deoxyribonucleic acid</subject><subject>Diagnostic software</subject><subject>Diagnostic systems</subject><subject>DNA</subject><subject>DNA, Catalytic - metabolism</subject><subject>G-Quadruplexes</subject><subject>Growth factors</subject><subject>Humans</subject><subject>Magnesium</subject><subject>Magnesium - metabolism</subject><subject>Mimicry</subject><subject>Nanomaterials</subject><subject>Nuclease</subject><subject>Nucleic acids</subject><subject>Peroxidase</subject><subject>Platelet-derived growth factor</subject><subject>Platelet-Derived Growth Factor - analysis</subject><subject>Platelet-Derived Growth Factor - metabolism</subject><subject>Platelet-derived growth factor BB</subject><subject>Selectivity</subject><subject>Signal transduction</subject><subject>Substrates</subject><issn>0003-2700</issn><issn>1520-6882</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kUFuEzEYhS0EoqFwA4QssWEz4bc99kyWIaUpUoGC0vXIY3vSqTzj1PbQTldcgatwJE6C0yRdsGBh_ZvvvWfpQ-g1gSkBSt5LFaayl1ZdmW46q4ED0CdoQjiFTJQlfYomAMAyWgAcoRchXAMQAkQ8R0eMlJznMJug3xfe3bVdG0f8oe1126-zlW_Xa-ONxvMQTFfbEbsGr24d_vxlfj92JuDGebyQUdrxPmHfjTUymC21_PPz17dBaj9srLnDJ4eA7HV6-NJGn8g-tLH9YfCZ69za9MYNIa07GYJ82LqwMqbOmJ0YnziNl97dxit8KlV0_iV61kgbzKv9PUaXpx9Xi7Ps_Ovy02J-nsmc0pg1RDPKFSNSiZIbRSUITblmgoCeSaK14LloJGFKlzAjdc5UnRembApFSM3ZMXq36914dzOYEKuuDcpYKx9-XFFGZwWjTEBC3_6DXrvBJzlbinEhGKFFovIdpbwLwZum2vi2k36sCFRbp1VyWh2cVnunKfZmXz7UndGPoYPEBMAO2MYfh__b-RfMsLRK</recordid><startdate>20200107</startdate><enddate>20200107</enddate><creator>Xie, Yiming</creator><creator>Niu, Feina</creator><creator>Yu, Aimin</creator><creator>Lai, Guosong</creator><general>American Chemical Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QF</scope><scope>7QO</scope><scope>7QQ</scope><scope>7SC</scope><scope>7SE</scope><scope>7SP</scope><scope>7SR</scope><scope>7TA</scope><scope>7TB</scope><scope>7TM</scope><scope>7U5</scope><scope>7U7</scope><scope>7U9</scope><scope>8BQ</scope><scope>8FD</scope><scope>C1K</scope><scope>F28</scope><scope>FR3</scope><scope>H8D</scope><scope>H8G</scope><scope>H94</scope><scope>JG9</scope><scope>JQ2</scope><scope>KR7</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><scope>P64</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-8083-1378</orcidid></search><sort><creationdate>20200107</creationdate><title>Proximity Binding-Triggered Assembly of Two MNAzymes for Catalyzed Release of G‑Quadruplex DNAzymes and an Ultrasensitive Homogeneous Bioassay of Platelet-Derived Growth Factor</title><author>Xie, Yiming ; Niu, Feina ; Yu, Aimin ; Lai, Guosong</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a422t-f1d325c31ac685ec2a06d25d3610d9a1dd6546fa13cd8091b43cb47e8f7c11b53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Amplification</topic><topic>Analytical chemistry</topic><topic>Aptamers</topic><topic>Assembly</topic><topic>Bioassays</topic><topic>Biocatalysis</topic><topic>Chemistry</topic><topic>Colorimetry</topic><topic>Deoxyribonucleic acid</topic><topic>Diagnostic software</topic><topic>Diagnostic systems</topic><topic>DNA</topic><topic>DNA, Catalytic - metabolism</topic><topic>G-Quadruplexes</topic><topic>Growth factors</topic><topic>Humans</topic><topic>Magnesium</topic><topic>Magnesium - metabolism</topic><topic>Mimicry</topic><topic>Nanomaterials</topic><topic>Nuclease</topic><topic>Nucleic acids</topic><topic>Peroxidase</topic><topic>Platelet-derived growth factor</topic><topic>Platelet-Derived Growth Factor - analysis</topic><topic>Platelet-Derived Growth Factor - metabolism</topic><topic>Platelet-derived growth factor BB</topic><topic>Selectivity</topic><topic>Signal transduction</topic><topic>Substrates</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Xie, Yiming</creatorcontrib><creatorcontrib>Niu, Feina</creatorcontrib><creatorcontrib>Yu, Aimin</creatorcontrib><creatorcontrib>Lai, Guosong</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Aluminium Industry Abstracts</collection><collection>Biotechnology Research Abstracts</collection><collection>Ceramic Abstracts</collection><collection>Computer and Information Systems Abstracts</collection><collection>Corrosion Abstracts</collection><collection>Electronics & Communications Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Materials Business File</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ANTE: Abstracts in New Technology & Engineering</collection><collection>Engineering Research Database</collection><collection>Aerospace Database</collection><collection>Copper Technical Reference Library</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Materials Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>Civil Engineering Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Analytical chemistry (Washington)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Xie, Yiming</au><au>Niu, Feina</au><au>Yu, Aimin</au><au>Lai, Guosong</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Proximity Binding-Triggered Assembly of Two MNAzymes for Catalyzed Release of G‑Quadruplex DNAzymes and an Ultrasensitive Homogeneous Bioassay of Platelet-Derived Growth Factor</atitle><jtitle>Analytical chemistry (Washington)</jtitle><addtitle>Anal. Chem</addtitle><date>2020-01-07</date><risdate>2020</risdate><volume>92</volume><issue>1</issue><spage>593</spage><epage>598</epage><pages>593-598</pages><issn>0003-2700</issn><eissn>1520-6882</eissn><abstract>When the target biorecognition-triggered assembly of two Mg2+-dependent DNAzymes (MNAzymes) is employed for dually catalytic release of peroxidase-mimicking G-quadruplex DNAzymes (G-DNAzymes), this work develops a novel homogeneous colorimetric method for an ultrasensitive bioassay of platelet-derived growth factor-BB (PDGF-BB). The first MNAzyme assembly is realized through a highly specific aptamer biorecognition-driven proximity ligation reaction. Its catalytic cleavage toward the two designed hairpin substrates not only releases a large amount of G-DNAzymes for colorimetric signal transduction but also enables the spontaneous assembly of another MNAzyme for signal amplification. This leads to the successful detection of PDGF-BB in a wide linear range from 2.0 pg mL–1 to 20 ng mL–1 with a very low detection down to 0.088 pg mL–1. As the whole reactions including aptamer biorecognitions, DNA hybridizations, and catalytic cleavages of MNAzymes are conducted in a homogeneous solution, this method has very simple manipulations and also has high repeatability. In addition, the high specificity of the aptamer biorecognition-triggered signal transduction decides the excellent selectivity of the method. This bioassay does not require an expensive instrument and nucleic acid labeling for signal readout or any nanomaterial, enzyme, or nuclease for signal amplification. Thus, it displays an extensive potential for clinical diagnostic applications.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>31855409</pmid><doi>10.1021/acs.analchem.9b05002</doi><tpages>6</tpages><orcidid>https://orcid.org/0000-0002-8083-1378</orcidid><oa>free_for_read</oa></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0003-2700 |
ispartof | Analytical chemistry (Washington), 2020-01, Vol.92 (1), p.593-598 |
issn | 0003-2700 1520-6882 |
language | eng |
recordid | cdi_proquest_miscellaneous_2329732360 |
source | MEDLINE; ACS Publications |
subjects | Amplification Analytical chemistry Aptamers Assembly Bioassays Biocatalysis Chemistry Colorimetry Deoxyribonucleic acid Diagnostic software Diagnostic systems DNA DNA, Catalytic - metabolism G-Quadruplexes Growth factors Humans Magnesium Magnesium - metabolism Mimicry Nanomaterials Nuclease Nucleic acids Peroxidase Platelet-derived growth factor Platelet-Derived Growth Factor - analysis Platelet-Derived Growth Factor - metabolism Platelet-derived growth factor BB Selectivity Signal transduction Substrates |
title | Proximity Binding-Triggered Assembly of Two MNAzymes for Catalyzed Release of G‑Quadruplex DNAzymes and an Ultrasensitive Homogeneous Bioassay of Platelet-Derived Growth Factor |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-23T02%3A24%3A04IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Proximity%20Binding-Triggered%20Assembly%20of%20Two%20MNAzymes%20for%20Catalyzed%20Release%20of%20G%E2%80%91Quadruplex%20DNAzymes%20and%20an%20Ultrasensitive%20Homogeneous%20Bioassay%20of%20Platelet-Derived%20Growth%20Factor&rft.jtitle=Analytical%20chemistry%20(Washington)&rft.au=Xie,%20Yiming&rft.date=2020-01-07&rft.volume=92&rft.issue=1&rft.spage=593&rft.epage=598&rft.pages=593-598&rft.issn=0003-2700&rft.eissn=1520-6882&rft_id=info:doi/10.1021/acs.analchem.9b05002&rft_dat=%3Cproquest_cross%3E2329732360%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2335663127&rft_id=info:pmid/31855409&rfr_iscdi=true |