A novel cathepsin L inhibitor prevents the progression of idiopathic pulmonary fibrosis

[Display omitted] •Compound 3 showed 1.5-fold more potent activity than that of control against Cat L.•Compound 3 presented new interaction modes with cathepsin by its B-ring moiety.•MD simulation showed that 3 and Cat L kept stable interaction in the binding site.•The anti-fibrotic ability of 3 was...

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Veröffentlicht in:Bioorganic chemistry 2020-01, Vol.94, p.103417-103417, Article 103417
Hauptverfasser: Yuan, Lei, Zou, Chunyang, Ge, Wentao, Liu, Yutong, Hu, Baichun, Wang, Jian, Lin, Bin, Li, Yanchun, Ma, Enlong
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container_issue
container_start_page 103417
container_title Bioorganic chemistry
container_volume 94
creator Yuan, Lei
Zou, Chunyang
Ge, Wentao
Liu, Yutong
Hu, Baichun
Wang, Jian
Lin, Bin
Li, Yanchun
Ma, Enlong
description [Display omitted] •Compound 3 showed 1.5-fold more potent activity than that of control against Cat L.•Compound 3 presented new interaction modes with cathepsin by its B-ring moiety.•MD simulation showed that 3 and Cat L kept stable interaction in the binding site.•The anti-fibrotic ability of 3 was confirmed by in vitro and in vivo study.•It is the first report that asperphenamate analog showed the anti-fibrotic ability. In previous work, the target of asperphenamate as a natural product was successfully determined as cathepsin by the natural product consensus pharmacophore strategy. In order to develop accurate SAR (structure-activity relationship) of asperphenamate-type cathepsin inhibitor, we chose several novel analogs with heterocyclic moiety to perform further study. The molecular simulation showed that 4-pyridyl derivative 3 with the greatest cathepsin inhibitory activity presented new interaction modes with protein utilizing its B-ring moiety. And then molecular dynamics (MD) simulation further revealed that 3 and cathepsin kept stable interaction in the binding site, which validated the molecular docking results. In view that cathepsins play an important role in fibrosis and some cathepsin inhibitors display the therapeutic ability for fibrosis, we investigated the anti-fibrotic effect of 3in vitro and in vivo. The results indicated that 3 displayed the strongest inhibitory effect on the formation of α-SMA and collagen I as the protein markers of fibrosis among all tested derivatives. Further in vivo assay confirmed that 3 indeed showed significant inhibitory ability against pulmonary fibrosis by the method of H&E and Masson staining as well as immunohistochemical staining for characteristic α-SMA proteins.
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In previous work, the target of asperphenamate as a natural product was successfully determined as cathepsin by the natural product consensus pharmacophore strategy. In order to develop accurate SAR (structure-activity relationship) of asperphenamate-type cathepsin inhibitor, we chose several novel analogs with heterocyclic moiety to perform further study. The molecular simulation showed that 4-pyridyl derivative 3 with the greatest cathepsin inhibitory activity presented new interaction modes with protein utilizing its B-ring moiety. And then molecular dynamics (MD) simulation further revealed that 3 and cathepsin kept stable interaction in the binding site, which validated the molecular docking results. In view that cathepsins play an important role in fibrosis and some cathepsin inhibitors display the therapeutic ability for fibrosis, we investigated the anti-fibrotic effect of 3in vitro and in vivo. The results indicated that 3 displayed the strongest inhibitory effect on the formation of α-SMA and collagen I as the protein markers of fibrosis among all tested derivatives. Further in vivo assay confirmed that 3 indeed showed significant inhibitory ability against pulmonary fibrosis by the method of H&amp;E and Masson staining as well as immunohistochemical staining for characteristic α-SMA proteins.</description><identifier>ISSN: 0045-2068</identifier><identifier>EISSN: 1090-2120</identifier><identifier>DOI: 10.1016/j.bioorg.2019.103417</identifier><identifier>PMID: 31744600</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Anti-fibrotic effect in vitro and in vivo ; Asperphenamate ; Biological Products ; Cathepsin inhibitor ; Cathepsin L - antagonists &amp; inhibitors ; Disease Progression ; Humans ; Idiopathic pulmonary fibrosis (IPF) ; Idiopathic Pulmonary Fibrosis - drug therapy ; Idiopathic Pulmonary Fibrosis - pathology ; Molecular Docking Simulation - methods ; Molecular dynamics (MD) simulation ; Structure-Activity Relationship</subject><ispartof>Bioorganic chemistry, 2020-01, Vol.94, p.103417-103417, Article 103417</ispartof><rights>2019 Elsevier Inc.</rights><rights>Copyright © 2019 Elsevier Inc. 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In previous work, the target of asperphenamate as a natural product was successfully determined as cathepsin by the natural product consensus pharmacophore strategy. In order to develop accurate SAR (structure-activity relationship) of asperphenamate-type cathepsin inhibitor, we chose several novel analogs with heterocyclic moiety to perform further study. The molecular simulation showed that 4-pyridyl derivative 3 with the greatest cathepsin inhibitory activity presented new interaction modes with protein utilizing its B-ring moiety. And then molecular dynamics (MD) simulation further revealed that 3 and cathepsin kept stable interaction in the binding site, which validated the molecular docking results. In view that cathepsins play an important role in fibrosis and some cathepsin inhibitors display the therapeutic ability for fibrosis, we investigated the anti-fibrotic effect of 3in vitro and in vivo. The results indicated that 3 displayed the strongest inhibitory effect on the formation of α-SMA and collagen I as the protein markers of fibrosis among all tested derivatives. 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In previous work, the target of asperphenamate as a natural product was successfully determined as cathepsin by the natural product consensus pharmacophore strategy. In order to develop accurate SAR (structure-activity relationship) of asperphenamate-type cathepsin inhibitor, we chose several novel analogs with heterocyclic moiety to perform further study. The molecular simulation showed that 4-pyridyl derivative 3 with the greatest cathepsin inhibitory activity presented new interaction modes with protein utilizing its B-ring moiety. And then molecular dynamics (MD) simulation further revealed that 3 and cathepsin kept stable interaction in the binding site, which validated the molecular docking results. In view that cathepsins play an important role in fibrosis and some cathepsin inhibitors display the therapeutic ability for fibrosis, we investigated the anti-fibrotic effect of 3in vitro and in vivo. The results indicated that 3 displayed the strongest inhibitory effect on the formation of α-SMA and collagen I as the protein markers of fibrosis among all tested derivatives. Further in vivo assay confirmed that 3 indeed showed significant inhibitory ability against pulmonary fibrosis by the method of H&amp;E and Masson staining as well as immunohistochemical staining for characteristic α-SMA proteins.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>31744600</pmid><doi>10.1016/j.bioorg.2019.103417</doi><tpages>1</tpages></addata></record>
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subjects Anti-fibrotic effect in vitro and in vivo
Asperphenamate
Biological Products
Cathepsin inhibitor
Cathepsin L - antagonists & inhibitors
Disease Progression
Humans
Idiopathic pulmonary fibrosis (IPF)
Idiopathic Pulmonary Fibrosis - drug therapy
Idiopathic Pulmonary Fibrosis - pathology
Molecular Docking Simulation - methods
Molecular dynamics (MD) simulation
Structure-Activity Relationship
title A novel cathepsin L inhibitor prevents the progression of idiopathic pulmonary fibrosis
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