Protein resonance assignment by BSH‐CP‐based 3D solid‐state NMR experiments: A practical guide
Solid‐state NMR (ssNMR) spectroscopy has evolved into a powerful method to obtain structural information and to study the dynamics of proteins at atomic resolution and under physiological conditions. The method is especially well suited to investigate insoluble and noncrystalline proteins that canno...
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description | Solid‐state NMR (ssNMR) spectroscopy has evolved into a powerful method to obtain structural information and to study the dynamics of proteins at atomic resolution and under physiological conditions. The method is especially well suited to investigate insoluble and noncrystalline proteins that cannot be investigated easily by X‐ray crystallography or solution NMR. To allow for detailed analysis of ssNMR data, the assignment of resonances to the protein atoms is essential. For this purpose, a set of three‐dimensional (3D) spectra needs to be acquired. Band‐selective homo‐nuclear cross‐polarization (BSH‐CP) is an effective method for magnetization transfer between carbonyl carbon (CO) and alpha carbon (CA) atoms, which is an important transfer step in multidimensional ssNMR experiments. This tutorial describes the detailed procedure for the chemical shift assignment of the backbone atoms of 13C–15N‐labeled proteins by BSH‐CP‐based 13C‐detected ssNMR experiments. A set of six 3D experiments is used for unambiguous assignment of the protein backbone as well as certain side‐chain resonances. The tutorial especially addresses scientists with little experience in the field of ssNMR and provides all the necessary information for protein assignment in an efficient, time‐saving approach.
For detailed analysis of solid‐state NMR (ssNMR) data, the essential assignment of resonances to the protein atoms requires the acquisition of a set of threedimensional (3D) spectra. Band‐selective homo‐nuclear cross‐polarization (BSH‐CP) is an effective method for magnetization transfer between carbonyl carbon (CO) and alpha carbon (CA) atoms; an important transfer step in multidimensional ssNMR experiments. This tutorial describes the detailed procedure for efficient and time‐saving backbone chemical shift assignment of 13C–15N‐labeled proteins by BSHCP‐based 13C‐detected ssNMR experiments. |
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For detailed analysis of solid‐state NMR (ssNMR) data, the essential assignment of resonances to the protein atoms requires the acquisition of a set of threedimensional (3D) spectra. Band‐selective homo‐nuclear cross‐polarization (BSH‐CP) is an effective method for magnetization transfer between carbonyl carbon (CO) and alpha carbon (CA) atoms; an important transfer step in multidimensional ssNMR experiments. This tutorial describes the detailed procedure for efficient and time‐saving backbone chemical shift assignment of 13C–15N‐labeled proteins by BSHCP‐based 13C‐detected ssNMR experiments.</description><identifier>ISSN: 0749-1581</identifier><identifier>EISSN: 1097-458X</identifier><identifier>DOI: 10.1002/mrc.4945</identifier><identifier>PMID: 31691361</identifier><language>eng</language><publisher>England: Wiley Subscription Services, Inc</publisher><subject>Backbone ; BSH‐CP ; Carbon ; Carbonyls ; Chemical equilibrium ; Crystallography ; Dynamic structural analysis ; Experiments ; magic‐angle spinning ; NMR ; Nuclear magnetic resonance ; protein NMR ; Proteins ; resonance assignment ; solid‐state NMR ; Spectrum analysis</subject><ispartof>Magnetic resonance in chemistry, 2020-05, Vol.58 (5), p.445-465</ispartof><rights>2019 The Authors. Magnetic Resonance in Chemistry published by John Wiley & Sons Ltd</rights><rights>2019 The Authors. Magnetic Resonance in Chemistry published by John Wiley & Sons Ltd.</rights><rights>2020 John Wiley & Sons, Ltd.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c3835-95c123b9608099025a2b603f230e1e8ce3125f84c84fa8735e924bb1a3ff3f203</citedby><cites>FETCH-LOGICAL-c3835-95c123b9608099025a2b603f230e1e8ce3125f84c84fa8735e924bb1a3ff3f203</cites><orcidid>0000-0003-4168-1706 ; 0000-0002-7534-5973</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fmrc.4945$$EPDF$$P50$$Gwiley$$Hfree_for_read</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fmrc.4945$$EHTML$$P50$$Gwiley$$Hfree_for_read</linktohtml><link.rule.ids>314,776,780,1411,27901,27902,45550,45551</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31691361$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hoffmann, Jutta</creatorcontrib><creatorcontrib>Ruta, Julia</creatorcontrib><creatorcontrib>Shi, Chaowei</creatorcontrib><creatorcontrib>Hendriks, Kitty</creatorcontrib><creatorcontrib>Chevelkov, Veniamin</creatorcontrib><creatorcontrib>Franks, W. Trent</creatorcontrib><creatorcontrib>Oschkinat, Hartmut</creatorcontrib><creatorcontrib>Giller, Karin</creatorcontrib><creatorcontrib>Becker, Stefan</creatorcontrib><creatorcontrib>Lange, Adam</creatorcontrib><title>Protein resonance assignment by BSH‐CP‐based 3D solid‐state NMR experiments: A practical guide</title><title>Magnetic resonance in chemistry</title><addtitle>Magn Reson Chem</addtitle><description>Solid‐state NMR (ssNMR) spectroscopy has evolved into a powerful method to obtain structural information and to study the dynamics of proteins at atomic resolution and under physiological conditions. The method is especially well suited to investigate insoluble and noncrystalline proteins that cannot be investigated easily by X‐ray crystallography or solution NMR. To allow for detailed analysis of ssNMR data, the assignment of resonances to the protein atoms is essential. For this purpose, a set of three‐dimensional (3D) spectra needs to be acquired. Band‐selective homo‐nuclear cross‐polarization (BSH‐CP) is an effective method for magnetization transfer between carbonyl carbon (CO) and alpha carbon (CA) atoms, which is an important transfer step in multidimensional ssNMR experiments. This tutorial describes the detailed procedure for the chemical shift assignment of the backbone atoms of 13C–15N‐labeled proteins by BSH‐CP‐based 13C‐detected ssNMR experiments. A set of six 3D experiments is used for unambiguous assignment of the protein backbone as well as certain side‐chain resonances. The tutorial especially addresses scientists with little experience in the field of ssNMR and provides all the necessary information for protein assignment in an efficient, time‐saving approach.
For detailed analysis of solid‐state NMR (ssNMR) data, the essential assignment of resonances to the protein atoms requires the acquisition of a set of threedimensional (3D) spectra. Band‐selective homo‐nuclear cross‐polarization (BSH‐CP) is an effective method for magnetization transfer between carbonyl carbon (CO) and alpha carbon (CA) atoms; an important transfer step in multidimensional ssNMR experiments. This tutorial describes the detailed procedure for efficient and time‐saving backbone chemical shift assignment of 13C–15N‐labeled proteins by BSHCP‐based 13C‐detected ssNMR experiments.</description><subject>Backbone</subject><subject>BSH‐CP</subject><subject>Carbon</subject><subject>Carbonyls</subject><subject>Chemical equilibrium</subject><subject>Crystallography</subject><subject>Dynamic structural analysis</subject><subject>Experiments</subject><subject>magic‐angle spinning</subject><subject>NMR</subject><subject>Nuclear magnetic resonance</subject><subject>protein NMR</subject><subject>Proteins</subject><subject>resonance assignment</subject><subject>solid‐state NMR</subject><subject>Spectrum analysis</subject><issn>0749-1581</issn><issn>1097-458X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>24P</sourceid><recordid>eNp1kNtKxDAQhoMouq6CTyABb7zpmkOzTbzTegRXxQN4V9J0ulS6bU1adO98BJ_RJzF1VUTwZgaGbz5mfoS2KBlRQtjezJpRqEKxhAaUqCgIhXxYRgMShSqgQtI1tO7cIyFEqYivojVOx4ryMR2g7NrWLRQVtuDqSlcGsHaumFYzqFqczvHh7dn761t87UuqHWSYH2FXl0XmB67VLeDLyQ2GlwZs0e-4fXyAG6tNWxhd4mlXZLCBVnJdOtj86kN0f3J8F58FF1en5_HBRWC45CJQwlDGUzUm0h9KmNAsHROeM06AgjTAKRO5DI0Mcy0jLkCxME2p5nnuKcKHaHfhbWz91IFrk1nhDJSlrqDuXMJ6QaiEiDy68wd9rDtb-es8JQVlRKpfQmNr5yzkSeO_1HaeUJL0ySc--aRP3qPbX8IunUH2A35H7YFgATwXJcz_FSWTm_hT-AEbCY1H</recordid><startdate>202005</startdate><enddate>202005</enddate><creator>Hoffmann, Jutta</creator><creator>Ruta, Julia</creator><creator>Shi, Chaowei</creator><creator>Hendriks, Kitty</creator><creator>Chevelkov, Veniamin</creator><creator>Franks, W. 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To allow for detailed analysis of ssNMR data, the assignment of resonances to the protein atoms is essential. For this purpose, a set of three‐dimensional (3D) spectra needs to be acquired. Band‐selective homo‐nuclear cross‐polarization (BSH‐CP) is an effective method for magnetization transfer between carbonyl carbon (CO) and alpha carbon (CA) atoms, which is an important transfer step in multidimensional ssNMR experiments. This tutorial describes the detailed procedure for the chemical shift assignment of the backbone atoms of 13C–15N‐labeled proteins by BSH‐CP‐based 13C‐detected ssNMR experiments. A set of six 3D experiments is used for unambiguous assignment of the protein backbone as well as certain side‐chain resonances. The tutorial especially addresses scientists with little experience in the field of ssNMR and provides all the necessary information for protein assignment in an efficient, time‐saving approach.
For detailed analysis of solid‐state NMR (ssNMR) data, the essential assignment of resonances to the protein atoms requires the acquisition of a set of threedimensional (3D) spectra. Band‐selective homo‐nuclear cross‐polarization (BSH‐CP) is an effective method for magnetization transfer between carbonyl carbon (CO) and alpha carbon (CA) atoms; an important transfer step in multidimensional ssNMR experiments. This tutorial describes the detailed procedure for efficient and time‐saving backbone chemical shift assignment of 13C–15N‐labeled proteins by BSHCP‐based 13C‐detected ssNMR experiments.</abstract><cop>England</cop><pub>Wiley Subscription Services, Inc</pub><pmid>31691361</pmid><doi>10.1002/mrc.4945</doi><tpages>21</tpages><orcidid>https://orcid.org/0000-0003-4168-1706</orcidid><orcidid>https://orcid.org/0000-0002-7534-5973</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Backbone BSH‐CP Carbon Carbonyls Chemical equilibrium Crystallography Dynamic structural analysis Experiments magic‐angle spinning NMR Nuclear magnetic resonance protein NMR Proteins resonance assignment solid‐state NMR Spectrum analysis |
title | Protein resonance assignment by BSH‐CP‐based 3D solid‐state NMR experiments: A practical guide |
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