Maribacter algicola sp. nov., isolated from a marine red alga, Porphyridium marinum , and transfer of Maripseudobacter aurantiacus Chen et al . 2017 to the genus Maribacter as Maribacter aurantiacus comb. nov
A Gram-stain-negative, strictly aerobic and moderately halophilic bacterial strain, designated strain PoM-212 , was isolated from a marine alga, , in the Republic of Korea. Cells were catalase- and oxidase-positive rods with gliding motility without flagellum. Growth was observed at 20-40 °C (optimu...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2020-02, Vol.70 (2), p.797-804 |
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| creator | Khan, Shehzad Abid Jeong, Sang Eun Baek, Ju Hye Jeon, Che Ok |
| description | A Gram-stain-negative, strictly aerobic and moderately halophilic bacterial strain, designated strain PoM-212
, was isolated from a marine alga,
, in the Republic of Korea. Cells were catalase- and oxidase-positive rods with gliding motility without flagellum. Growth was observed at 20-40 °C (optimum, 30 °C) and pH 5.0-8.5 (pH 5.0-5.5) and in the presence of 0.5-5 % (w/v) NaCl (2-3 %). Strain PoM-212
contained iso-C
, iso-C
, iso-C
3-OH and summed feature 3 (comprising C
ω7
and/or C
ω6
) as major fatty acids and menaquinone-6 as the sole isoprenoid quinone. Phosphatidylethanolamine, three unidentified aminolipids and two unidentified polar lipids were detected as major polar lipids. The G+C content of the genomic DNA was 41.0 mol%. Strain PoM-212
was most closely related to
KJ4
,
CDA4
and
C3
with 97.2, 97.2 and 97.0 % 16S rRNA gene sequence similarities, respectively, and it formed a distinct phylogenetic lineage from them within the genus
.
formed a close phylogenetic lineage with
with 99.7 % 16S rRNA gene sequence similarity, but their digital DNA-DNA hybridization value was 67.4 %. On the basis of its phenotypic, chemotaxonomic and molecular properties, strain PoM-212
represents a novel species of the genus
, for which the name
sp. nov. is proposed. The type strain is PoM-212
(=KACC 19789
=JCM 32941
). The transfer of
to the genus
as
comb. nov. is also proposed (type strain CDA4
=KCTC 52409
=MCCC 1K03210
). |
| doi_str_mv | 10.1099/ijsem.0.003828 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_2311921176</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2311921176</sourcerecordid><originalsourceid>FETCH-LOGICAL-c335t-f2e34f45a0196ce56d1b6255bde2cb59d4a238c3f475203f16ffddd7dece94de3</originalsourceid><addsrcrecordid>eNpVUU1P3DAQtaoi2FKuPVZz7GE3-CPxJsdqVaDSVuVAz5Fjj1mjJE5tB4l_2Z-EYdkVPc3He_NmNI-QL4wWjDbNpXuIOBS0oFTUvP5AFqyUclVRUX485lyekU8xPlCaG5SekjPBZM05qxfk3y8VXKd0wgCqv3fa9wriVMDoH4sluJjrhAZs8AMoGDJ7RAi5k9lqCbc-TLun4Iybhz2a4xLUaCAFNUabdb2Fly1TxNn4w645o8kpPUfY7HAETFkRCuCUrSF5SDuEexwz_P7C_6t3GtoP3evRn8mJVX3Ei7d4Tv5c_bjb3Ky2v69_br5vV1qIKq0sR1HaslKUNVJjJQ3rJK-qziDXXdWYUnFRa2HLdcWpsExaa4xZG9TYlAbFOfm2152C_ztjTO3gosa-VyP6ObZcMNZwxtYyU4s9VQcfY0DbTsHlXz21jLYvLravLra03buYB76-ac_dgOZIP9gmngEqXpxd</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2311921176</pqid></control><display><type>article</type><title>Maribacter algicola sp. nov., isolated from a marine red alga, Porphyridium marinum , and transfer of Maripseudobacter aurantiacus Chen et al . 2017 to the genus Maribacter as Maribacter aurantiacus comb. nov</title><source>MEDLINE</source><source>Microbiology Society</source><source>EZB-FREE-00999 freely available EZB journals</source><source>Alma/SFX Local Collection</source><creator>Khan, Shehzad Abid ; Jeong, Sang Eun ; Baek, Ju Hye ; Jeon, Che Ok</creator><creatorcontrib>Khan, Shehzad Abid ; Jeong, Sang Eun ; Baek, Ju Hye ; Jeon, Che Ok</creatorcontrib><description>A Gram-stain-negative, strictly aerobic and moderately halophilic bacterial strain, designated strain PoM-212
, was isolated from a marine alga,
, in the Republic of Korea. Cells were catalase- and oxidase-positive rods with gliding motility without flagellum. Growth was observed at 20-40 °C (optimum, 30 °C) and pH 5.0-8.5 (pH 5.0-5.5) and in the presence of 0.5-5 % (w/v) NaCl (2-3 %). Strain PoM-212
contained iso-C
, iso-C
, iso-C
3-OH and summed feature 3 (comprising C
ω7
and/or C
ω6
) as major fatty acids and menaquinone-6 as the sole isoprenoid quinone. Phosphatidylethanolamine, three unidentified aminolipids and two unidentified polar lipids were detected as major polar lipids. The G+C content of the genomic DNA was 41.0 mol%. Strain PoM-212
was most closely related to
KJ4
,
CDA4
and
C3
with 97.2, 97.2 and 97.0 % 16S rRNA gene sequence similarities, respectively, and it formed a distinct phylogenetic lineage from them within the genus
.
formed a close phylogenetic lineage with
with 99.7 % 16S rRNA gene sequence similarity, but their digital DNA-DNA hybridization value was 67.4 %. On the basis of its phenotypic, chemotaxonomic and molecular properties, strain PoM-212
represents a novel species of the genus
, for which the name
sp. nov. is proposed. The type strain is PoM-212
(=KACC 19789
=JCM 32941
). The transfer of
to the genus
as
comb. nov. is also proposed (type strain CDA4
=KCTC 52409
=MCCC 1K03210
).</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijsem.0.003828</identifier><identifier>PMID: 31682218</identifier><language>eng</language><publisher>England</publisher><subject>Bacterial Typing Techniques ; Base Composition ; DNA, Bacterial - genetics ; Fatty Acids - chemistry ; Flavobacteriaceae - classification ; Flavobacteriaceae - isolation & purification ; Nucleic Acid Hybridization ; Phospholipids - chemistry ; Phylogeny ; Porphyridium - microbiology ; Republic of Korea ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Vitamin K 2 - analogs & derivatives ; Vitamin K 2 - chemistry</subject><ispartof>International journal of systematic and evolutionary microbiology, 2020-02, Vol.70 (2), p.797-804</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c335t-f2e34f45a0196ce56d1b6255bde2cb59d4a238c3f475203f16ffddd7dece94de3</citedby><cites>FETCH-LOGICAL-c335t-f2e34f45a0196ce56d1b6255bde2cb59d4a238c3f475203f16ffddd7dece94de3</cites><orcidid>0000-0003-3306-7271</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,3746,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31682218$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Khan, Shehzad Abid</creatorcontrib><creatorcontrib>Jeong, Sang Eun</creatorcontrib><creatorcontrib>Baek, Ju Hye</creatorcontrib><creatorcontrib>Jeon, Che Ok</creatorcontrib><title>Maribacter algicola sp. nov., isolated from a marine red alga, Porphyridium marinum , and transfer of Maripseudobacter aurantiacus Chen et al . 2017 to the genus Maribacter as Maribacter aurantiacus comb. nov</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>A Gram-stain-negative, strictly aerobic and moderately halophilic bacterial strain, designated strain PoM-212
, was isolated from a marine alga,
, in the Republic of Korea. Cells were catalase- and oxidase-positive rods with gliding motility without flagellum. Growth was observed at 20-40 °C (optimum, 30 °C) and pH 5.0-8.5 (pH 5.0-5.5) and in the presence of 0.5-5 % (w/v) NaCl (2-3 %). Strain PoM-212
contained iso-C
, iso-C
, iso-C
3-OH and summed feature 3 (comprising C
ω7
and/or C
ω6
) as major fatty acids and menaquinone-6 as the sole isoprenoid quinone. Phosphatidylethanolamine, three unidentified aminolipids and two unidentified polar lipids were detected as major polar lipids. The G+C content of the genomic DNA was 41.0 mol%. Strain PoM-212
was most closely related to
KJ4
,
CDA4
and
C3
with 97.2, 97.2 and 97.0 % 16S rRNA gene sequence similarities, respectively, and it formed a distinct phylogenetic lineage from them within the genus
.
formed a close phylogenetic lineage with
with 99.7 % 16S rRNA gene sequence similarity, but their digital DNA-DNA hybridization value was 67.4 %. On the basis of its phenotypic, chemotaxonomic and molecular properties, strain PoM-212
represents a novel species of the genus
, for which the name
sp. nov. is proposed. The type strain is PoM-212
(=KACC 19789
=JCM 32941
). The transfer of
to the genus
as
comb. nov. is also proposed (type strain CDA4
=KCTC 52409
=MCCC 1K03210
).</description><subject>Bacterial Typing Techniques</subject><subject>Base Composition</subject><subject>DNA, Bacterial - genetics</subject><subject>Fatty Acids - chemistry</subject><subject>Flavobacteriaceae - classification</subject><subject>Flavobacteriaceae - isolation & purification</subject><subject>Nucleic Acid Hybridization</subject><subject>Phospholipids - chemistry</subject><subject>Phylogeny</subject><subject>Porphyridium - microbiology</subject><subject>Republic of Korea</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Vitamin K 2 - analogs & derivatives</subject><subject>Vitamin K 2 - chemistry</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2020</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpVUU1P3DAQtaoi2FKuPVZz7GE3-CPxJsdqVaDSVuVAz5Fjj1mjJE5tB4l_2Z-EYdkVPc3He_NmNI-QL4wWjDbNpXuIOBS0oFTUvP5AFqyUclVRUX485lyekU8xPlCaG5SekjPBZM05qxfk3y8VXKd0wgCqv3fa9wriVMDoH4sluJjrhAZs8AMoGDJ7RAi5k9lqCbc-TLun4Iybhz2a4xLUaCAFNUabdb2Fly1TxNn4w645o8kpPUfY7HAETFkRCuCUrSF5SDuEexwz_P7C_6t3GtoP3evRn8mJVX3Ei7d4Tv5c_bjb3Ky2v69_br5vV1qIKq0sR1HaslKUNVJjJQ3rJK-qziDXXdWYUnFRa2HLdcWpsExaa4xZG9TYlAbFOfm2152C_ztjTO3gosa-VyP6ObZcMNZwxtYyU4s9VQcfY0DbTsHlXz21jLYvLravLra03buYB76-ac_dgOZIP9gmngEqXpxd</recordid><startdate>202002</startdate><enddate>202002</enddate><creator>Khan, Shehzad Abid</creator><creator>Jeong, Sang Eun</creator><creator>Baek, Ju Hye</creator><creator>Jeon, Che Ok</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-3306-7271</orcidid></search><sort><creationdate>202002</creationdate><title>Maribacter algicola sp. nov., isolated from a marine red alga, Porphyridium marinum , and transfer of Maripseudobacter aurantiacus Chen et al . 2017 to the genus Maribacter as Maribacter aurantiacus comb. nov</title><author>Khan, Shehzad Abid ; Jeong, Sang Eun ; Baek, Ju Hye ; Jeon, Che Ok</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c335t-f2e34f45a0196ce56d1b6255bde2cb59d4a238c3f475203f16ffddd7dece94de3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2020</creationdate><topic>Bacterial Typing Techniques</topic><topic>Base Composition</topic><topic>DNA, Bacterial - genetics</topic><topic>Fatty Acids - chemistry</topic><topic>Flavobacteriaceae - classification</topic><topic>Flavobacteriaceae - isolation & purification</topic><topic>Nucleic Acid Hybridization</topic><topic>Phospholipids - chemistry</topic><topic>Phylogeny</topic><topic>Porphyridium - microbiology</topic><topic>Republic of Korea</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Vitamin K 2 - analogs & derivatives</topic><topic>Vitamin K 2 - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Khan, Shehzad Abid</creatorcontrib><creatorcontrib>Jeong, Sang Eun</creatorcontrib><creatorcontrib>Baek, Ju Hye</creatorcontrib><creatorcontrib>Jeon, Che Ok</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Khan, Shehzad Abid</au><au>Jeong, Sang Eun</au><au>Baek, Ju Hye</au><au>Jeon, Che Ok</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Maribacter algicola sp. nov., isolated from a marine red alga, Porphyridium marinum , and transfer of Maripseudobacter aurantiacus Chen et al . 2017 to the genus Maribacter as Maribacter aurantiacus comb. nov</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2020-02</date><risdate>2020</risdate><volume>70</volume><issue>2</issue><spage>797</spage><epage>804</epage><pages>797-804</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>A Gram-stain-negative, strictly aerobic and moderately halophilic bacterial strain, designated strain PoM-212
, was isolated from a marine alga,
, in the Republic of Korea. Cells were catalase- and oxidase-positive rods with gliding motility without flagellum. Growth was observed at 20-40 °C (optimum, 30 °C) and pH 5.0-8.5 (pH 5.0-5.5) and in the presence of 0.5-5 % (w/v) NaCl (2-3 %). Strain PoM-212
contained iso-C
, iso-C
, iso-C
3-OH and summed feature 3 (comprising C
ω7
and/or C
ω6
) as major fatty acids and menaquinone-6 as the sole isoprenoid quinone. Phosphatidylethanolamine, three unidentified aminolipids and two unidentified polar lipids were detected as major polar lipids. The G+C content of the genomic DNA was 41.0 mol%. Strain PoM-212
was most closely related to
KJ4
,
CDA4
and
C3
with 97.2, 97.2 and 97.0 % 16S rRNA gene sequence similarities, respectively, and it formed a distinct phylogenetic lineage from them within the genus
.
formed a close phylogenetic lineage with
with 99.7 % 16S rRNA gene sequence similarity, but their digital DNA-DNA hybridization value was 67.4 %. On the basis of its phenotypic, chemotaxonomic and molecular properties, strain PoM-212
represents a novel species of the genus
, for which the name
sp. nov. is proposed. The type strain is PoM-212
(=KACC 19789
=JCM 32941
). The transfer of
to the genus
as
comb. nov. is also proposed (type strain CDA4
=KCTC 52409
=MCCC 1K03210
).</abstract><cop>England</cop><pmid>31682218</pmid><doi>10.1099/ijsem.0.003828</doi><tpages>8</tpages><orcidid>https://orcid.org/0000-0003-3306-7271</orcidid><oa>free_for_read</oa></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 1466-5026 |
| ispartof | International journal of systematic and evolutionary microbiology, 2020-02, Vol.70 (2), p.797-804 |
| issn | 1466-5026 1466-5034 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_2311921176 |
| source | MEDLINE; Microbiology Society; EZB-FREE-00999 freely available EZB journals; Alma/SFX Local Collection |
| subjects | Bacterial Typing Techniques Base Composition DNA, Bacterial - genetics Fatty Acids - chemistry Flavobacteriaceae - classification Flavobacteriaceae - isolation & purification Nucleic Acid Hybridization Phospholipids - chemistry Phylogeny Porphyridium - microbiology Republic of Korea RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Vitamin K 2 - analogs & derivatives Vitamin K 2 - chemistry |
| title | Maribacter algicola sp. nov., isolated from a marine red alga, Porphyridium marinum , and transfer of Maripseudobacter aurantiacus Chen et al . 2017 to the genus Maribacter as Maribacter aurantiacus comb. nov |
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