Detection of new vitiviruses infecting grapevine in California
Recently, five new viruses from the genus Vitivirus were identified and named grapevine virus G, H, I, J and L. These viruses were targeted in a survey to evaluate their prevalence in different grapevine populations in California. Excluding a single detection of GVJ, other vitiviruses were detected...
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| Veröffentlicht in: | Archives of virology 2019-10, Vol.164 (10), p.2573-2580 |
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| creator | Diaz-Lara, Alfredo Brisbane, Reid S. Aram, Kamyar Golino, Deborah Al Rwahnih, Maher |
| description | Recently, five new viruses from the genus
Vitivirus
were identified and named grapevine virus G, H, I, J and L. These viruses were targeted in a survey to evaluate their prevalence in different grapevine populations in California. Excluding a single detection of GVJ, other vitiviruses were detected infecting several grapevine selections via RT-PCR and later confirmed by sequencing. This paper represents the first report of GVG, GVH and GVI in California. In a preliminary analysis, the sequence diversity between identified isolates of GVG, GVH, GVI and GVL was investigated using distance matrices and phylogenetics. Finally, coinfections involving diverse vitiviruses and leafroll viruses were evidenced. |
| doi_str_mv | 10.1007/s00705-019-04355-1 |
| format | Article |
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Vitivirus
were identified and named grapevine virus G, H, I, J and L. These viruses were targeted in a survey to evaluate their prevalence in different grapevine populations in California. Excluding a single detection of GVJ, other vitiviruses were detected infecting several grapevine selections via RT-PCR and later confirmed by sequencing. This paper represents the first report of GVG, GVH and GVI in California. In a preliminary analysis, the sequence diversity between identified isolates of GVG, GVH, GVI and GVL was investigated using distance matrices and phylogenetics. Finally, coinfections involving diverse vitiviruses and leafroll viruses were evidenced.</description><identifier>ISSN: 0304-8608</identifier><identifier>EISSN: 1432-8798</identifier><identifier>DOI: 10.1007/s00705-019-04355-1</identifier><identifier>PMID: 31346770</identifier><language>eng</language><publisher>Vienna: Springer Vienna</publisher><subject>Biomedical and Life Sciences ; Biomedicine ; Brief Report ; Infectious Diseases ; Medical Microbiology ; Phylogeny ; Polymerase chain reaction ; Virology ; Viruses</subject><ispartof>Archives of virology, 2019-10, Vol.164 (10), p.2573-2580</ispartof><rights>Springer-Verlag GmbH Austria, part of Springer Nature 2019</rights><rights>Archives of Virology is a copyright of Springer, (2019). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c375t-6c9ad1017d74dbc13e6220fe883c0961d3c31e98fde8c9c49b485486879f9d1a3</citedby><cites>FETCH-LOGICAL-c375t-6c9ad1017d74dbc13e6220fe883c0961d3c31e98fde8c9c49b485486879f9d1a3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00705-019-04355-1$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00705-019-04355-1$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>315,781,785,27926,27927,41490,42559,51321</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31346770$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Diaz-Lara, Alfredo</creatorcontrib><creatorcontrib>Brisbane, Reid S.</creatorcontrib><creatorcontrib>Aram, Kamyar</creatorcontrib><creatorcontrib>Golino, Deborah</creatorcontrib><creatorcontrib>Al Rwahnih, Maher</creatorcontrib><title>Detection of new vitiviruses infecting grapevine in California</title><title>Archives of virology</title><addtitle>Arch Virol</addtitle><addtitle>Arch Virol</addtitle><description>Recently, five new viruses from the genus
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Finally, coinfections involving diverse vitiviruses and leafroll viruses were evidenced.</description><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Brief Report</subject><subject>Infectious Diseases</subject><subject>Medical Microbiology</subject><subject>Phylogeny</subject><subject>Polymerase chain reaction</subject><subject>Virology</subject><subject>Viruses</subject><issn>0304-8608</issn><issn>1432-8798</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kE1LAzEQhoMotlb_gAdZ8OJlNdl8XwSpn1Dwouewzc6WlG22JrsV_72pWxU8eElg5pl3kgehU4IvCcbyKqYD8xwTnWNGOc_JHhoTRotcSa320RhTzHIlsBqhoxiXGKcC5YdoRAllQko8Rte30IHtXOuzts48vGcb17mNC32EmDlfb5t-kS1CuYaN85Bq2bRsXN0G78pjdFCXTYST3T1Br_d3L9PHfPb88DS9meWWSt7lwuqyIpjISrJqbgkFURS4BqWoxVqQilpKQKu6AmW1ZXrOFGdKpH_UuiIlnaCLIXcd2rceYmdWLlpomtJD20dTFIJLIXmhEnr-B122ffDpdVuKSimEYokqBsqGNsYAtVkHtyrDhyHYbO2awa5Jds2XXUPS0Nkuup-voPoZ-daZADoAMbX8AsLv7n9iPwEOJ4O-</recordid><startdate>20191001</startdate><enddate>20191001</enddate><creator>Diaz-Lara, Alfredo</creator><creator>Brisbane, Reid S.</creator><creator>Aram, Kamyar</creator><creator>Golino, Deborah</creator><creator>Al Rwahnih, Maher</creator><general>Springer Vienna</general><general>Springer Nature B.V</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20191001</creationdate><title>Detection of new vitiviruses infecting grapevine in California</title><author>Diaz-Lara, Alfredo ; 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Vitivirus
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| title | Detection of new vitiviruses infecting grapevine in California |
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