Aquibacillus sediminis sp. nov., a moderately halophilic bacterium isolated from saltern soil
A Gram-stain-positive, moderately halophilic bacterium, designated strain BH258 , was isolated from solar saltern sediment sampled at Shinan in the Republic of Korea. Cells of strain BH258 were found to be strictly aerobic, motile, endospore-forming rods which could grow at 15-45 °C (optimum, 35 °C)...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2019-10, Vol.69 (10), p.3121-3127 |
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| container_title | International journal of systematic and evolutionary microbiology |
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| creator | Lee, Jae-Chan Whang, Kyung-Sook |
| description | A Gram-stain-positive, moderately halophilic bacterium, designated strain BH258
, was isolated from solar saltern sediment sampled at Shinan in the Republic of Korea. Cells of strain BH258
were found to be strictly aerobic, motile, endospore-forming rods which could grow at 15-45 °C (optimum, 35 °C), at pH 5.5-9.0 (pH 7.0) and at salinities of 0.5-20 % (w/v) NaCl (7-10%). Phylogenetic analyses based on 16S rRNA gene sequences indicated that strain BH258
belongs to the genus
, showing highest sequence similarity to
BH30097
(96.1 %),
YIM 93624
(95.9 %),
B6B
(95.6 %) and
WSY08-1
(95.1 %). The predominant isoprenoid quinone was identified as menaquinone-7, and the cell-wall peptidoglycan was found to contain
-diaminopimelic acid as the diagnostic diamino acid. The major fatty acids were identified as anteiso-C
, iso-C
, anteiso-C
and iso-C
. The major polar lipids were identified as phosphatidylglycerol, diphosphatidylglycerol and three unidentified phospholipids. The DNA G+C content of this novel isolate was determined to be 37.35 mol%. On the basis of the results of phylogenetic, phenotypic and chemotaxonomic analyses in this study, strain BH258
is considered to represent a novel species of the genus
, for which the name
sp. nov. is proposed. The type strain is BH258
(=KACC 18680
=NBRC 111875
). |
| doi_str_mv | 10.1099/ijsem.0.003599 |
| format | Article |
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, was isolated from solar saltern sediment sampled at Shinan in the Republic of Korea. Cells of strain BH258
were found to be strictly aerobic, motile, endospore-forming rods which could grow at 15-45 °C (optimum, 35 °C), at pH 5.5-9.0 (pH 7.0) and at salinities of 0.5-20 % (w/v) NaCl (7-10%). Phylogenetic analyses based on 16S rRNA gene sequences indicated that strain BH258
belongs to the genus
, showing highest sequence similarity to
BH30097
(96.1 %),
YIM 93624
(95.9 %),
B6B
(95.6 %) and
WSY08-1
(95.1 %). The predominant isoprenoid quinone was identified as menaquinone-7, and the cell-wall peptidoglycan was found to contain
-diaminopimelic acid as the diagnostic diamino acid. The major fatty acids were identified as anteiso-C
, iso-C
, anteiso-C
and iso-C
. The major polar lipids were identified as phosphatidylglycerol, diphosphatidylglycerol and three unidentified phospholipids. The DNA G+C content of this novel isolate was determined to be 37.35 mol%. On the basis of the results of phylogenetic, phenotypic and chemotaxonomic analyses in this study, strain BH258
is considered to represent a novel species of the genus
, for which the name
sp. nov. is proposed. The type strain is BH258
(=KACC 18680
=NBRC 111875
).</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijsem.0.003599</identifier><identifier>PMID: 31339480</identifier><language>eng</language><publisher>England</publisher><subject>Bacillaceae - classification ; Bacillaceae - isolation & purification ; Bacterial Typing Techniques ; Base Composition ; Diaminopimelic Acid - chemistry ; DNA, Bacterial - genetics ; Fatty Acids - chemistry ; Geologic Sediments - microbiology ; Peptidoglycan - chemistry ; Phospholipids - chemistry ; Phylogeny ; Republic of Korea ; RNA, Ribosomal, 16S - genetics ; Salinity ; Sequence Analysis, DNA ; Soil Microbiology ; Vitamin K 2 - analogs & derivatives ; Vitamin K 2 - chemistry</subject><ispartof>International journal of systematic and evolutionary microbiology, 2019-10, Vol.69 (10), p.3121-3127</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c335t-e3f6f8c744c651ef30d37e5716e8084804343f878732772be242aa161fe9db333</citedby><cites>FETCH-LOGICAL-c335t-e3f6f8c744c651ef30d37e5716e8084804343f878732772be242aa161fe9db333</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,3746,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31339480$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lee, Jae-Chan</creatorcontrib><creatorcontrib>Whang, Kyung-Sook</creatorcontrib><title>Aquibacillus sediminis sp. nov., a moderately halophilic bacterium isolated from saltern soil</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>A Gram-stain-positive, moderately halophilic bacterium, designated strain BH258
, was isolated from solar saltern sediment sampled at Shinan in the Republic of Korea. Cells of strain BH258
were found to be strictly aerobic, motile, endospore-forming rods which could grow at 15-45 °C (optimum, 35 °C), at pH 5.5-9.0 (pH 7.0) and at salinities of 0.5-20 % (w/v) NaCl (7-10%). Phylogenetic analyses based on 16S rRNA gene sequences indicated that strain BH258
belongs to the genus
, showing highest sequence similarity to
BH30097
(96.1 %),
YIM 93624
(95.9 %),
B6B
(95.6 %) and
WSY08-1
(95.1 %). The predominant isoprenoid quinone was identified as menaquinone-7, and the cell-wall peptidoglycan was found to contain
-diaminopimelic acid as the diagnostic diamino acid. The major fatty acids were identified as anteiso-C
, iso-C
, anteiso-C
and iso-C
. The major polar lipids were identified as phosphatidylglycerol, diphosphatidylglycerol and three unidentified phospholipids. The DNA G+C content of this novel isolate was determined to be 37.35 mol%. On the basis of the results of phylogenetic, phenotypic and chemotaxonomic analyses in this study, strain BH258
is considered to represent a novel species of the genus
, for which the name
sp. nov. is proposed. The type strain is BH258
(=KACC 18680
=NBRC 111875
).</description><subject>Bacillaceae - classification</subject><subject>Bacillaceae - isolation & purification</subject><subject>Bacterial Typing Techniques</subject><subject>Base Composition</subject><subject>Diaminopimelic Acid - chemistry</subject><subject>DNA, Bacterial - genetics</subject><subject>Fatty Acids - chemistry</subject><subject>Geologic Sediments - microbiology</subject><subject>Peptidoglycan - chemistry</subject><subject>Phospholipids - chemistry</subject><subject>Phylogeny</subject><subject>Republic of Korea</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Salinity</subject><subject>Sequence Analysis, DNA</subject><subject>Soil Microbiology</subject><subject>Vitamin K 2 - analogs & derivatives</subject><subject>Vitamin K 2 - chemistry</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo9kM1Lw0AQxRdRbK1ePcoePZg4u5PPYyl-QcGLHiVskgndsptNs4nQ_97YVk_zmHnvMfwYuxUQCsjzR731ZEMIATDO8zM2F1GSBDFgdP6vZTJjV95vAaYFwCWboUDMowzm7Gu5G3WpKm3M6LmnWlvd6kl1IW_dd_jAFbeupl4NZPZ8o4zrNtroik-hgXo9Wq69M9O55k3vLPfKTPuWe6fNNbtolPF0c5oL9vn89LF6DdbvL2-r5TqoEOMhIGySJqvSKKqSWFCDUGNKcSoSyiCb_owwwiZLsxRlmsqSZCSVEoloKK9LRFyw-2Nv17vdSH4orPYVGaNacqMvpEwQJWQHa3i0Vr3zvqem6HptVb8vBBS_SIsD0gKKI9IpcHfqHktL9b_9jyH-ALUqcqI</recordid><startdate>20191001</startdate><enddate>20191001</enddate><creator>Lee, Jae-Chan</creator><creator>Whang, Kyung-Sook</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20191001</creationdate><title>Aquibacillus sediminis sp. nov., a moderately halophilic bacterium isolated from saltern soil</title><author>Lee, Jae-Chan ; Whang, Kyung-Sook</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c335t-e3f6f8c744c651ef30d37e5716e8084804343f878732772be242aa161fe9db333</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Bacillaceae - classification</topic><topic>Bacillaceae - isolation & purification</topic><topic>Bacterial Typing Techniques</topic><topic>Base Composition</topic><topic>Diaminopimelic Acid - chemistry</topic><topic>DNA, Bacterial - genetics</topic><topic>Fatty Acids - chemistry</topic><topic>Geologic Sediments - microbiology</topic><topic>Peptidoglycan - chemistry</topic><topic>Phospholipids - chemistry</topic><topic>Phylogeny</topic><topic>Republic of Korea</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Salinity</topic><topic>Sequence Analysis, DNA</topic><topic>Soil Microbiology</topic><topic>Vitamin K 2 - analogs & derivatives</topic><topic>Vitamin K 2 - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, Jae-Chan</creatorcontrib><creatorcontrib>Whang, Kyung-Sook</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, Jae-Chan</au><au>Whang, Kyung-Sook</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Aquibacillus sediminis sp. nov., a moderately halophilic bacterium isolated from saltern soil</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2019-10-01</date><risdate>2019</risdate><volume>69</volume><issue>10</issue><spage>3121</spage><epage>3127</epage><pages>3121-3127</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>A Gram-stain-positive, moderately halophilic bacterium, designated strain BH258
, was isolated from solar saltern sediment sampled at Shinan in the Republic of Korea. Cells of strain BH258
were found to be strictly aerobic, motile, endospore-forming rods which could grow at 15-45 °C (optimum, 35 °C), at pH 5.5-9.0 (pH 7.0) and at salinities of 0.5-20 % (w/v) NaCl (7-10%). Phylogenetic analyses based on 16S rRNA gene sequences indicated that strain BH258
belongs to the genus
, showing highest sequence similarity to
BH30097
(96.1 %),
YIM 93624
(95.9 %),
B6B
(95.6 %) and
WSY08-1
(95.1 %). The predominant isoprenoid quinone was identified as menaquinone-7, and the cell-wall peptidoglycan was found to contain
-diaminopimelic acid as the diagnostic diamino acid. The major fatty acids were identified as anteiso-C
, iso-C
, anteiso-C
and iso-C
. The major polar lipids were identified as phosphatidylglycerol, diphosphatidylglycerol and three unidentified phospholipids. The DNA G+C content of this novel isolate was determined to be 37.35 mol%. On the basis of the results of phylogenetic, phenotypic and chemotaxonomic analyses in this study, strain BH258
is considered to represent a novel species of the genus
, for which the name
sp. nov. is proposed. The type strain is BH258
(=KACC 18680
=NBRC 111875
).</abstract><cop>England</cop><pmid>31339480</pmid><doi>10.1099/ijsem.0.003599</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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| source | MEDLINE; Microbiology Society; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection |
| subjects | Bacillaceae - classification Bacillaceae - isolation & purification Bacterial Typing Techniques Base Composition Diaminopimelic Acid - chemistry DNA, Bacterial - genetics Fatty Acids - chemistry Geologic Sediments - microbiology Peptidoglycan - chemistry Phospholipids - chemistry Phylogeny Republic of Korea RNA, Ribosomal, 16S - genetics Salinity Sequence Analysis, DNA Soil Microbiology Vitamin K 2 - analogs & derivatives Vitamin K 2 - chemistry |
| title | Aquibacillus sediminis sp. nov., a moderately halophilic bacterium isolated from saltern soil |
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