Detection of Chlamydia psittaci Genotypes Among Birds in Northeast Iran
We determined the prevalence of Chlamydia psittaci genotypes in asymptomatic and symptomatic birds in northeast Iran. Samples were collected from 11 species of Psittaciformes and 1 species of Columbiformes from 2015 to 2016. Choanal cleft and cloacal swab samples, fresh fecal samples, and/or tissue...
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Veröffentlicht in: | Journal of avian medicine and surgery 2019-03, Vol.33 (1), p.22-28 |
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description | We determined the prevalence of Chlamydia psittaci genotypes in asymptomatic and symptomatic birds in northeast Iran. Samples were collected from 11 species of Psittaciformes and 1 species of Columbiformes from 2015 to 2016. Choanal cleft and cloacal swab samples, fresh fecal samples, and/or tissue samples of 70 symptomatic and 130 asymptomatic birds were collected and tested by molecular detection (nested polymerase chain reaction [PCR] testing specific for C psittaci). Results showed C psittaci was detected in 37 (18.5%) of 200 birds (18/37 symptomatic and 19/37 asymptomatic birds) by nested PCR assay. Of the PCR-positive samples, 14 products were positive for oligonucleotide sets CTU/CTL by a second PCR assay and genotyped by outer membrane protein A (ompA) gene sequencing. Of the 10 samples positive for genotype A (cockatiels [Nymphicus hollandicus, n = 5], ring-necked parakeet [Psittacula krameri, n = 2], African gray parrot [Psittacus erithacus, n = 3]), 6 samples were from asymptomatic and 4 from symptomatic birds. Genotype B was observed in 3 samples from symptomatic birds (P krameri [n = 2], pigeon [Columba livia, n = 1]), and provisional genotype I was detected in one symptomatic cockatiel. These findings revealed the importance of monitoring imported asymptomatic birds in developing countries, especially the Middle East, where there is no systematic monitoring. To the best of our knowledge, this is the first report regarding the detection of C psittaci provisional genotype I in cockatiels. |
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Samples were collected from 11 species of Psittaciformes and 1 species of Columbiformes from 2015 to 2016. Choanal cleft and cloacal swab samples, fresh fecal samples, and/or tissue samples of 70 symptomatic and 130 asymptomatic birds were collected and tested by molecular detection (nested polymerase chain reaction [PCR] testing specific for C psittaci). Results showed C psittaci was detected in 37 (18.5%) of 200 birds (18/37 symptomatic and 19/37 asymptomatic birds) by nested PCR assay. Of the PCR-positive samples, 14 products were positive for oligonucleotide sets CTU/CTL by a second PCR assay and genotyped by outer membrane protein A (ompA) gene sequencing. Of the 10 samples positive for genotype A (cockatiels [Nymphicus hollandicus, n = 5], ring-necked parakeet [Psittacula krameri, n = 2], African gray parrot [Psittacus erithacus, n = 3]), 6 samples were from asymptomatic and 4 from symptomatic birds. Genotype B was observed in 3 samples from symptomatic birds (P krameri [n = 2], pigeon [Columba livia, n = 1]), and provisional genotype I was detected in one symptomatic cockatiel. These findings revealed the importance of monitoring imported asymptomatic birds in developing countries, especially the Middle East, where there is no systematic monitoring. To the best of our knowledge, this is the first report regarding the detection of C psittaci provisional genotype I in cockatiels.</description><identifier>ISSN: 1082-6742</identifier><identifier>EISSN: 1938-2871</identifier><identifier>DOI: 10.1647/2017-334</identifier><identifier>PMID: 31124608</identifier><language>eng</language><publisher>United States: Association of Avian Veterinarians</publisher><subject>Anopheles ; avian ; Backup software ; Bacterial genetics ; Chlamydia ; Chlamydia infections ; Chlamydia psittaci ; chlamydiosis ; Columbiformes ; Genetic aspects ; Genotypes ; nested-PCR ; omp A gene ; ORIGINAL STUDIES ; Parrot fever ; Parrots ; Polymerase chain reaction ; Psittaciformes</subject><ispartof>Journal of avian medicine and surgery, 2019-03, Vol.33 (1), p.22-28</ispartof><rights>2019 by the Association of Avian Veterinarians</rights><rights>2019 by the Association of Avian Veterinarians.</rights><rights>COPYRIGHT 2019 Association of Avian Veterinarians</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-b403t-bcaf90fde7a85a7b47c79adb93602684525a25ec52915f169837a555b9dd131c3</citedby><cites>FETCH-LOGICAL-b403t-bcaf90fde7a85a7b47c79adb93602684525a25ec52915f169837a555b9dd131c3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/48686269$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/48686269$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,778,782,801,27911,27912,58004,58237</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/31124608$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Mina, Abbasi</creatorcontrib><creatorcontrib>Fatemeh, Akbarzadeh</creatorcontrib><creatorcontrib>Jamshid, Razmyar</creatorcontrib><title>Detection of Chlamydia psittaci Genotypes Among Birds in Northeast Iran</title><title>Journal of avian medicine and surgery</title><addtitle>J Avian Med Surg</addtitle><description>We determined the prevalence of Chlamydia psittaci genotypes in asymptomatic and symptomatic birds in northeast Iran. Samples were collected from 11 species of Psittaciformes and 1 species of Columbiformes from 2015 to 2016. Choanal cleft and cloacal swab samples, fresh fecal samples, and/or tissue samples of 70 symptomatic and 130 asymptomatic birds were collected and tested by molecular detection (nested polymerase chain reaction [PCR] testing specific for C psittaci). Results showed C psittaci was detected in 37 (18.5%) of 200 birds (18/37 symptomatic and 19/37 asymptomatic birds) by nested PCR assay. Of the PCR-positive samples, 14 products were positive for oligonucleotide sets CTU/CTL by a second PCR assay and genotyped by outer membrane protein A (ompA) gene sequencing. Of the 10 samples positive for genotype A (cockatiels [Nymphicus hollandicus, n = 5], ring-necked parakeet [Psittacula krameri, n = 2], African gray parrot [Psittacus erithacus, n = 3]), 6 samples were from asymptomatic and 4 from symptomatic birds. Genotype B was observed in 3 samples from symptomatic birds (P krameri [n = 2], pigeon [Columba livia, n = 1]), and provisional genotype I was detected in one symptomatic cockatiel. These findings revealed the importance of monitoring imported asymptomatic birds in developing countries, especially the Middle East, where there is no systematic monitoring. To the best of our knowledge, this is the first report regarding the detection of C psittaci provisional genotype I in cockatiels.</description><subject>Anopheles</subject><subject>avian</subject><subject>Backup software</subject><subject>Bacterial genetics</subject><subject>Chlamydia</subject><subject>Chlamydia infections</subject><subject>Chlamydia psittaci</subject><subject>chlamydiosis</subject><subject>Columbiformes</subject><subject>Genetic aspects</subject><subject>Genotypes</subject><subject>nested-PCR</subject><subject>omp A gene</subject><subject>ORIGINAL STUDIES</subject><subject>Parrot fever</subject><subject>Parrots</subject><subject>Polymerase chain reaction</subject><subject>Psittaciformes</subject><issn>1082-6742</issn><issn>1938-2871</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><recordid>eNp1kU1rGzEQhkVpaD5a6B9IEARCL-vq--PoOK0TMMmlPQutVpso7K5cST7430eO3UChYQ4zaB6N3tELwFeMZlgw-Z0gLBtK2QdwgjVVDVESf6w1UqQRkpFjcJrzM0JYEKQ-gWOKMWECqROwvPHFuxLiBGMPF0-DHbddsHCdQynWBbj0Uyzbtc9wPsbpEV6H1GUYJngfU3nyNhd4l-z0GRz1dsj-yyGfgd8_f_xa3Darh-XdYr5qWoZoaVpne436zkuruJUtk05q27WaCkSEYpxwS7h3nGjMeyy0otJyzlvddZhiR8_At_3cdYp_Nj4XM4bs_DDYycdNNoRQginRQlf0co8-2sGbMPWxJOt2uJlzRQXnhMlKzf5D1ej8GFycfB_q-T8XDgpcijkn35t1CqNNW4OR2blhdm6Y6kZFLw5iN-3ouzfw7_dX4HwPPOcS01ufKaEEeV3hat9vQ6xS3n_pBTw8lpI</recordid><startdate>20190301</startdate><enddate>20190301</enddate><creator>Mina, Abbasi</creator><creator>Fatemeh, Akbarzadeh</creator><creator>Jamshid, Razmyar</creator><general>Association of Avian Veterinarians</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20190301</creationdate><title>Detection of Chlamydia psittaci Genotypes Among Birds in Northeast Iran</title><author>Mina, Abbasi ; Fatemeh, Akbarzadeh ; Jamshid, Razmyar</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-b403t-bcaf90fde7a85a7b47c79adb93602684525a25ec52915f169837a555b9dd131c3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Anopheles</topic><topic>avian</topic><topic>Backup software</topic><topic>Bacterial genetics</topic><topic>Chlamydia</topic><topic>Chlamydia infections</topic><topic>Chlamydia psittaci</topic><topic>chlamydiosis</topic><topic>Columbiformes</topic><topic>Genetic aspects</topic><topic>Genotypes</topic><topic>nested-PCR</topic><topic>omp A gene</topic><topic>ORIGINAL STUDIES</topic><topic>Parrot fever</topic><topic>Parrots</topic><topic>Polymerase chain reaction</topic><topic>Psittaciformes</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Mina, Abbasi</creatorcontrib><creatorcontrib>Fatemeh, Akbarzadeh</creatorcontrib><creatorcontrib>Jamshid, Razmyar</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of avian medicine and surgery</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Mina, Abbasi</au><au>Fatemeh, Akbarzadeh</au><au>Jamshid, Razmyar</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Detection of Chlamydia psittaci Genotypes Among Birds in Northeast Iran</atitle><jtitle>Journal of avian medicine and surgery</jtitle><addtitle>J Avian Med Surg</addtitle><date>2019-03-01</date><risdate>2019</risdate><volume>33</volume><issue>1</issue><spage>22</spage><epage>28</epage><pages>22-28</pages><issn>1082-6742</issn><eissn>1938-2871</eissn><abstract>We determined the prevalence of Chlamydia psittaci genotypes in asymptomatic and symptomatic birds in northeast Iran. Samples were collected from 11 species of Psittaciformes and 1 species of Columbiformes from 2015 to 2016. Choanal cleft and cloacal swab samples, fresh fecal samples, and/or tissue samples of 70 symptomatic and 130 asymptomatic birds were collected and tested by molecular detection (nested polymerase chain reaction [PCR] testing specific for C psittaci). Results showed C psittaci was detected in 37 (18.5%) of 200 birds (18/37 symptomatic and 19/37 asymptomatic birds) by nested PCR assay. Of the PCR-positive samples, 14 products were positive for oligonucleotide sets CTU/CTL by a second PCR assay and genotyped by outer membrane protein A (ompA) gene sequencing. Of the 10 samples positive for genotype A (cockatiels [Nymphicus hollandicus, n = 5], ring-necked parakeet [Psittacula krameri, n = 2], African gray parrot [Psittacus erithacus, n = 3]), 6 samples were from asymptomatic and 4 from symptomatic birds. Genotype B was observed in 3 samples from symptomatic birds (P krameri [n = 2], pigeon [Columba livia, n = 1]), and provisional genotype I was detected in one symptomatic cockatiel. These findings revealed the importance of monitoring imported asymptomatic birds in developing countries, especially the Middle East, where there is no systematic monitoring. To the best of our knowledge, this is the first report regarding the detection of C psittaci provisional genotype I in cockatiels.</abstract><cop>United States</cop><pub>Association of Avian Veterinarians</pub><pmid>31124608</pmid><doi>10.1647/2017-334</doi><tpages>7</tpages></addata></record> |
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subjects | Anopheles avian Backup software Bacterial genetics Chlamydia Chlamydia infections Chlamydia psittaci chlamydiosis Columbiformes Genetic aspects Genotypes nested-PCR omp A gene ORIGINAL STUDIES Parrot fever Parrots Polymerase chain reaction Psittaciformes |
title | Detection of Chlamydia psittaci Genotypes Among Birds in Northeast Iran |
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