Diversity of epiphytic fungi on the surface of Kyoho grape berries during ripening process in summer and winter at Nanning region, Guangxi, China
The two-harvest-per-year farming system allow table grape to be harvested a year both in summer and winter in southern China. Herein, we used high-throughput sequencing to investigate the diversity of fungi on grape fruits surface during the ripening process in summer and winter at subtropical Nanni...
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Veröffentlicht in: | Fungal biology 2019-04, Vol.123 (4), p.283-289 |
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description | The two-harvest-per-year farming system allow table grape to be harvested a year both in summer and winter in southern China. Herein, we used high-throughput sequencing to investigate the diversity of fungi on grape fruits surface during the ripening process in summer and winter at subtropical Nanning region, Guangxi, China. The results showed that 23 fungal species existed in all samples. Among them, the five most dominant species were Cladosporium ramotenellum, Pseudozyma aphidis, Gyrothrix spp., Gibberella intricans and Acremonium alternatum, with abundance from 61.62 % to 91.26 %. Analysis using the student's t-test for Shannon index indicated that components of fungal community varied significantly between the two ripening seasons. The dominant genera of core fungal community were Cladosporium, Gyrothrix, Paramycosphaerella, Acremonium, Penicillium and Tilletiopsis in the summer and Cladosporium, Pseudozyma, Gibberella, Colletotrichum, Sporobolomyces, Rhodosporidium, Alternaria and Aspergillus in the winter. Overall, fungi diversity on grape fruits surface at Nanning showed significantly differences between different ripening seasons. Our results ennrich the understanding of epiphytic communities of grape fruits in subtropics.
•Epiphytic fungal diversity of grape berries from southwest China were firstly studied.•Difference of harvest time influence epiphytic fungal diversity of the same vineyard significantly.•Epiphytic fungal community of grape berries in southwest China varied notably from other regions. |
doi_str_mv | 10.1016/j.funbio.2018.11.014 |
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•Epiphytic fungal diversity of grape berries from southwest China were firstly studied.•Difference of harvest time influence epiphytic fungal diversity of the same vineyard significantly.•Epiphytic fungal community of grape berries in southwest China varied notably from other regions.</description><identifier>ISSN: 1878-6146</identifier><identifier>EISSN: 1878-6162</identifier><identifier>DOI: 10.1016/j.funbio.2018.11.014</identifier><identifier>PMID: 30928037</identifier><language>eng</language><publisher>Netherlands: Elsevier Ltd</publisher><subject>Epiphyte ; High-throughput sequencing ; Microbial community ; Tropical viticulture</subject><ispartof>Fungal biology, 2019-04, Vol.123 (4), p.283-289</ispartof><rights>2019 British Mycological Society</rights><rights>Copyright © 2019 British Mycological Society. Published by Elsevier Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c428t-84a4677592eddeef47d9d954232ee1d7ca7effecd6d10b4322aef9465f44fcf13</citedby><cites>FETCH-LOGICAL-c428t-84a4677592eddeef47d9d954232ee1d7ca7effecd6d10b4322aef9465f44fcf13</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S1878614619300133$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30928037$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ding, Su</creatorcontrib><creatorcontrib>Li, Nan</creatorcontrib><creatorcontrib>Cao, Muming</creatorcontrib><creatorcontrib>Huang, Qiufeng</creatorcontrib><creatorcontrib>Chen, Guopin</creatorcontrib><creatorcontrib>Xie, Shuyu</creatorcontrib><creatorcontrib>Zhang, Jing</creatorcontrib><creatorcontrib>Cheng, Guo</creatorcontrib><creatorcontrib>Li, Wei</creatorcontrib><title>Diversity of epiphytic fungi on the surface of Kyoho grape berries during ripening process in summer and winter at Nanning region, Guangxi, China</title><title>Fungal biology</title><addtitle>Fungal Biol</addtitle><description>The two-harvest-per-year farming system allow table grape to be harvested a year both in summer and winter in southern China. Herein, we used high-throughput sequencing to investigate the diversity of fungi on grape fruits surface during the ripening process in summer and winter at subtropical Nanning region, Guangxi, China. The results showed that 23 fungal species existed in all samples. Among them, the five most dominant species were Cladosporium ramotenellum, Pseudozyma aphidis, Gyrothrix spp., Gibberella intricans and Acremonium alternatum, with abundance from 61.62 % to 91.26 %. Analysis using the student's t-test for Shannon index indicated that components of fungal community varied significantly between the two ripening seasons. The dominant genera of core fungal community were Cladosporium, Gyrothrix, Paramycosphaerella, Acremonium, Penicillium and Tilletiopsis in the summer and Cladosporium, Pseudozyma, Gibberella, Colletotrichum, Sporobolomyces, Rhodosporidium, Alternaria and Aspergillus in the winter. Overall, fungi diversity on grape fruits surface at Nanning showed significantly differences between different ripening seasons. Our results ennrich the understanding of epiphytic communities of grape fruits in subtropics.
•Epiphytic fungal diversity of grape berries from southwest China were firstly studied.•Difference of harvest time influence epiphytic fungal diversity of the same vineyard significantly.•Epiphytic fungal community of grape berries in southwest China varied notably from other regions.</description><subject>Epiphyte</subject><subject>High-throughput sequencing</subject><subject>Microbial community</subject><subject>Tropical viticulture</subject><issn>1878-6146</issn><issn>1878-6162</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><recordid>eNp9kcFu1DAQhi0EolXpGyDkI4dusB1vnFyQ0JYWRAUXOFtee5yd1cYOdlLYx-CN67ClR-Yy_-H7Z-z5CXnNWcUZb97tKz-HLcZKMN5WnFeMy2fknLeqXTW8Ec-ftGzOyGXOe1aq5nXbqZfkrGadaFmtzsmfa7yHlHE60ugpjDjujhNaWsb3SGOg0w5onpM3FhbiyzHuIu2TGYFuISWETN2cMPQ04QhhEWOKFnKmGIpzGCBRExz9hWFa5ES_mvCXS9BjDFf0djah_41XdLPDYF6RF94cMlw-9gvy4-bj982n1d2328-bD3crK0U7rVppZKPUuhPgHICXynWuW0tRCwDulDUKvAfrGsfZVtZCGPCdbNZeSm89ry_I29Pc8tyfM-RJD5gtHA4mQJyzFuW0iiuh1gWVJ9SmmHMCr8eEg0lHzZle8tB7fcpDL3loznXJo9jePG6YtwO4J9O_6xfg_QmA8s97hKSzRQgWHCawk3YR_7_hARiIoKI</recordid><startdate>201904</startdate><enddate>201904</enddate><creator>Ding, Su</creator><creator>Li, Nan</creator><creator>Cao, Muming</creator><creator>Huang, Qiufeng</creator><creator>Chen, Guopin</creator><creator>Xie, Shuyu</creator><creator>Zhang, Jing</creator><creator>Cheng, Guo</creator><creator>Li, Wei</creator><general>Elsevier Ltd</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>201904</creationdate><title>Diversity of epiphytic fungi on the surface of Kyoho grape berries during ripening process in summer and winter at Nanning region, Guangxi, China</title><author>Ding, Su ; Li, Nan ; Cao, Muming ; Huang, Qiufeng ; Chen, Guopin ; Xie, Shuyu ; Zhang, Jing ; Cheng, Guo ; Li, Wei</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c428t-84a4677592eddeef47d9d954232ee1d7ca7effecd6d10b4322aef9465f44fcf13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Epiphyte</topic><topic>High-throughput sequencing</topic><topic>Microbial community</topic><topic>Tropical viticulture</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ding, Su</creatorcontrib><creatorcontrib>Li, Nan</creatorcontrib><creatorcontrib>Cao, Muming</creatorcontrib><creatorcontrib>Huang, Qiufeng</creatorcontrib><creatorcontrib>Chen, Guopin</creatorcontrib><creatorcontrib>Xie, Shuyu</creatorcontrib><creatorcontrib>Zhang, Jing</creatorcontrib><creatorcontrib>Cheng, Guo</creatorcontrib><creatorcontrib>Li, Wei</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Fungal biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ding, Su</au><au>Li, Nan</au><au>Cao, Muming</au><au>Huang, Qiufeng</au><au>Chen, Guopin</au><au>Xie, Shuyu</au><au>Zhang, Jing</au><au>Cheng, Guo</au><au>Li, Wei</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Diversity of epiphytic fungi on the surface of Kyoho grape berries during ripening process in summer and winter at Nanning region, Guangxi, China</atitle><jtitle>Fungal biology</jtitle><addtitle>Fungal Biol</addtitle><date>2019-04</date><risdate>2019</risdate><volume>123</volume><issue>4</issue><spage>283</spage><epage>289</epage><pages>283-289</pages><issn>1878-6146</issn><eissn>1878-6162</eissn><abstract>The two-harvest-per-year farming system allow table grape to be harvested a year both in summer and winter in southern China. Herein, we used high-throughput sequencing to investigate the diversity of fungi on grape fruits surface during the ripening process in summer and winter at subtropical Nanning region, Guangxi, China. The results showed that 23 fungal species existed in all samples. Among them, the five most dominant species were Cladosporium ramotenellum, Pseudozyma aphidis, Gyrothrix spp., Gibberella intricans and Acremonium alternatum, with abundance from 61.62 % to 91.26 %. Analysis using the student's t-test for Shannon index indicated that components of fungal community varied significantly between the two ripening seasons. The dominant genera of core fungal community were Cladosporium, Gyrothrix, Paramycosphaerella, Acremonium, Penicillium and Tilletiopsis in the summer and Cladosporium, Pseudozyma, Gibberella, Colletotrichum, Sporobolomyces, Rhodosporidium, Alternaria and Aspergillus in the winter. Overall, fungi diversity on grape fruits surface at Nanning showed significantly differences between different ripening seasons. Our results ennrich the understanding of epiphytic communities of grape fruits in subtropics.
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subjects | Epiphyte High-throughput sequencing Microbial community Tropical viticulture |
title | Diversity of epiphytic fungi on the surface of Kyoho grape berries during ripening process in summer and winter at Nanning region, Guangxi, China |
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