Comparative identification, nutritional, and physiological regulation of chicken liver-enriched genes
The liver performs a number of vital functions in the chicken. In order to identify unique gene expression patterns and link them to potential functions in the chicken liver, genes enriched in the liver of chickens needed to be investigated in a comparative manner. In this study, 41 liver-enriched g...
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Veröffentlicht in: | Poultry science 2019-07, Vol.98 (7), p.3007-3013 |
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description | The liver performs a number of vital functions in the chicken. In order to identify unique gene expression patterns and link them to potential functions in the chicken liver, genes enriched in the liver of chickens needed to be investigated in a comparative manner. In this study, 41 liver-enriched genes were identified through chicken microarray, and many of them were validated through comparative analysis of mice and humans. Thirteen of them were unique in chickens, and their liver enhancement was confirmed by reverse transcription PCR. Furthermore, the expression of those 13 chicken liver-enriched genes was investigated, in response to nutritional and physiological challenges. Real-time PCR revealed that expression of PIT54 (P < 0.01), phosphoribosyl pyrophosphate synthetase 2 (PRPS2) (P < 0.05), sulfotransferase (SULT) (P < 0.05), and cytochrome P450 family 2 subfamily C, polypeptide 18 (CYP2C18) (P < 0.05) were significantly decreased in the liver during fasting compared to ad libitum control. During the post-laying stage, expression of GAL8 was significantly increased (P < 0.01), but CYP2C18 expression was significantly reduced (P < 0.05). Liver-enriched genes that were identified in this study and their expression patterns under fasting and the post-laying stage will serve as future targets to gain a better understanding of liver physiology, function and development in poultry. |
doi_str_mv | 10.3382/ps/pez057 |
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In order to identify unique gene expression patterns and link them to potential functions in the chicken liver, genes enriched in the liver of chickens needed to be investigated in a comparative manner. In this study, 41 liver-enriched genes were identified through chicken microarray, and many of them were validated through comparative analysis of mice and humans. Thirteen of them were unique in chickens, and their liver enhancement was confirmed by reverse transcription PCR. Furthermore, the expression of those 13 chicken liver-enriched genes was investigated, in response to nutritional and physiological challenges. Real-time PCR revealed that expression of PIT54 (P < 0.01), phosphoribosyl pyrophosphate synthetase 2 (PRPS2) (P < 0.05), sulfotransferase (SULT) (P < 0.05), and cytochrome P450 family 2 subfamily C, polypeptide 18 (CYP2C18) (P < 0.05) were significantly decreased in the liver during fasting compared to ad libitum control. During the post-laying stage, expression of GAL8 was significantly increased (P < 0.01), but CYP2C18 expression was significantly reduced (P < 0.05). Liver-enriched genes that were identified in this study and their expression patterns under fasting and the post-laying stage will serve as future targets to gain a better understanding of liver physiology, function and development in poultry.]]></description><identifier>ISSN: 0032-5791</identifier><identifier>EISSN: 1525-3171</identifier><identifier>DOI: 10.3382/ps/pez057</identifier><identifier>PMID: 30796787</identifier><language>eng</language><publisher>England</publisher><subject>Animals ; chickens ; Chickens - genetics ; Chickens - physiology ; cytochrome P-450 ; fasting ; Female ; Food Deprivation - physiology ; Gene Expression Profiling ; gene expression regulation ; genes ; Humans ; liver ; Liver - physiology ; Mice ; microarray technology ; physiological regulation ; polypeptides ; quantitative polymerase chain reaction ; reverse transcriptase polymerase chain reaction ; transferases</subject><ispartof>Poultry science, 2019-07, Vol.98 (7), p.3007-3013</ispartof><rights>2019 Poultry Science Association Inc.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c353t-fd08af3a624c1d0b105deae1e6850489f49b2a0fa971020ac0bf333a278d76a03</citedby><cites>FETCH-LOGICAL-c353t-fd08af3a624c1d0b105deae1e6850489f49b2a0fa971020ac0bf333a278d76a03</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,777,781,27905,27906</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30796787$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ahn, J</creatorcontrib><creatorcontrib>Woodfint, R M</creatorcontrib><creatorcontrib>Lee, J</creatorcontrib><creatorcontrib>Wu, H</creatorcontrib><creatorcontrib>Ma, J</creatorcontrib><creatorcontrib>Suh, Y</creatorcontrib><creatorcontrib>Hwang, S</creatorcontrib><creatorcontrib>Cressman, M</creatorcontrib><creatorcontrib>Lee, K</creatorcontrib><title>Comparative identification, nutritional, and physiological regulation of chicken liver-enriched genes</title><title>Poultry science</title><addtitle>Poult Sci</addtitle><description><![CDATA[The liver performs a number of vital functions in the chicken. In order to identify unique gene expression patterns and link them to potential functions in the chicken liver, genes enriched in the liver of chickens needed to be investigated in a comparative manner. In this study, 41 liver-enriched genes were identified through chicken microarray, and many of them were validated through comparative analysis of mice and humans. Thirteen of them were unique in chickens, and their liver enhancement was confirmed by reverse transcription PCR. Furthermore, the expression of those 13 chicken liver-enriched genes was investigated, in response to nutritional and physiological challenges. Real-time PCR revealed that expression of PIT54 (P < 0.01), phosphoribosyl pyrophosphate synthetase 2 (PRPS2) (P < 0.05), sulfotransferase (SULT) (P < 0.05), and cytochrome P450 family 2 subfamily C, polypeptide 18 (CYP2C18) (P < 0.05) were significantly decreased in the liver during fasting compared to ad libitum control. During the post-laying stage, expression of GAL8 was significantly increased (P < 0.01), but CYP2C18 expression was significantly reduced (P < 0.05). Liver-enriched genes that were identified in this study and their expression patterns under fasting and the post-laying stage will serve as future targets to gain a better understanding of liver physiology, function and development in poultry.]]></description><subject>Animals</subject><subject>chickens</subject><subject>Chickens - genetics</subject><subject>Chickens - physiology</subject><subject>cytochrome P-450</subject><subject>fasting</subject><subject>Female</subject><subject>Food Deprivation - physiology</subject><subject>Gene Expression Profiling</subject><subject>gene expression regulation</subject><subject>genes</subject><subject>Humans</subject><subject>liver</subject><subject>Liver - physiology</subject><subject>Mice</subject><subject>microarray technology</subject><subject>physiological regulation</subject><subject>polypeptides</subject><subject>quantitative polymerase chain reaction</subject><subject>reverse transcriptase polymerase chain reaction</subject><subject>transferases</subject><issn>0032-5791</issn><issn>1525-3171</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqF0T1PwzAQBmALgaAUBv4A8ghSQ892HScjqviSKrHAHDnOuTW4SbATpPLrSWlhZbo76dE73EvIBYMbITI-beO0xS-Q6oCMmOQyEUyxQzICEDyRKmcn5DTGNwDO0lQdkxMBKk9VpkYE58261UF37hOpq7DunHVmOJt6Quu-C267aj-huq5ou9pE1_hmORBPAy57_0NpY6lZOfOONfVDUkiwDs6ssKJLrDGekSOrfcTz_RyT1_u7l_ljsnh-eJrfLhIjpOgSW0GmrdApnxlWQclAVqiRYZpJmGW5neUl12B1rhhw0AZKK4TQXGWVSjWIMbna5bah-egxdsXaRYPe6xqbPhZcCMlYmqXyf8oyKWXOmRro9Y6a0MQY0BZtcGsdNgWDYltA0cZiV8BgL_exfbnG6k_-flx8A-yKgzY</recordid><startdate>20190701</startdate><enddate>20190701</enddate><creator>Ahn, J</creator><creator>Woodfint, R M</creator><creator>Lee, J</creator><creator>Wu, H</creator><creator>Ma, J</creator><creator>Suh, Y</creator><creator>Hwang, S</creator><creator>Cressman, M</creator><creator>Lee, K</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7S9</scope><scope>L.6</scope></search><sort><creationdate>20190701</creationdate><title>Comparative identification, nutritional, and physiological regulation of chicken liver-enriched genes</title><author>Ahn, J ; Woodfint, R M ; Lee, J ; Wu, H ; Ma, J ; Suh, Y ; Hwang, S ; Cressman, M ; Lee, K</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c353t-fd08af3a624c1d0b105deae1e6850489f49b2a0fa971020ac0bf333a278d76a03</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Animals</topic><topic>chickens</topic><topic>Chickens - genetics</topic><topic>Chickens - physiology</topic><topic>cytochrome P-450</topic><topic>fasting</topic><topic>Female</topic><topic>Food Deprivation - physiology</topic><topic>Gene Expression Profiling</topic><topic>gene expression regulation</topic><topic>genes</topic><topic>Humans</topic><topic>liver</topic><topic>Liver - physiology</topic><topic>Mice</topic><topic>microarray technology</topic><topic>physiological regulation</topic><topic>polypeptides</topic><topic>quantitative polymerase chain reaction</topic><topic>reverse transcriptase polymerase chain reaction</topic><topic>transferases</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ahn, J</creatorcontrib><creatorcontrib>Woodfint, R M</creatorcontrib><creatorcontrib>Lee, J</creatorcontrib><creatorcontrib>Wu, H</creatorcontrib><creatorcontrib>Ma, J</creatorcontrib><creatorcontrib>Suh, Y</creatorcontrib><creatorcontrib>Hwang, S</creatorcontrib><creatorcontrib>Cressman, M</creatorcontrib><creatorcontrib>Lee, K</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>AGRICOLA</collection><collection>AGRICOLA - Academic</collection><jtitle>Poultry science</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ahn, J</au><au>Woodfint, R M</au><au>Lee, J</au><au>Wu, H</au><au>Ma, J</au><au>Suh, Y</au><au>Hwang, S</au><au>Cressman, M</au><au>Lee, K</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Comparative identification, nutritional, and physiological regulation of chicken liver-enriched genes</atitle><jtitle>Poultry science</jtitle><addtitle>Poult Sci</addtitle><date>2019-07-01</date><risdate>2019</risdate><volume>98</volume><issue>7</issue><spage>3007</spage><epage>3013</epage><pages>3007-3013</pages><issn>0032-5791</issn><eissn>1525-3171</eissn><abstract><![CDATA[The liver performs a number of vital functions in the chicken. In order to identify unique gene expression patterns and link them to potential functions in the chicken liver, genes enriched in the liver of chickens needed to be investigated in a comparative manner. In this study, 41 liver-enriched genes were identified through chicken microarray, and many of them were validated through comparative analysis of mice and humans. Thirteen of them were unique in chickens, and their liver enhancement was confirmed by reverse transcription PCR. Furthermore, the expression of those 13 chicken liver-enriched genes was investigated, in response to nutritional and physiological challenges. Real-time PCR revealed that expression of PIT54 (P < 0.01), phosphoribosyl pyrophosphate synthetase 2 (PRPS2) (P < 0.05), sulfotransferase (SULT) (P < 0.05), and cytochrome P450 family 2 subfamily C, polypeptide 18 (CYP2C18) (P < 0.05) were significantly decreased in the liver during fasting compared to ad libitum control. During the post-laying stage, expression of GAL8 was significantly increased (P < 0.01), but CYP2C18 expression was significantly reduced (P < 0.05). Liver-enriched genes that were identified in this study and their expression patterns under fasting and the post-laying stage will serve as future targets to gain a better understanding of liver physiology, function and development in poultry.]]></abstract><cop>England</cop><pmid>30796787</pmid><doi>10.3382/ps/pez057</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals chickens Chickens - genetics Chickens - physiology cytochrome P-450 fasting Female Food Deprivation - physiology Gene Expression Profiling gene expression regulation genes Humans liver Liver - physiology Mice microarray technology physiological regulation polypeptides quantitative polymerase chain reaction reverse transcriptase polymerase chain reaction transferases |
title | Comparative identification, nutritional, and physiological regulation of chicken liver-enriched genes |
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