MITE Aba12 , a Novel Mobile Miniature Inverted-Repeat Transposable Element Identified in Acinetobacter baumannii ATCC 17978 and Its Prevalence across the Moraxellaceae Family
Insertion sequences (IS) are fundamental mediators of genome plasticity with the potential to generate phenotypic variation with significant evolutionary outcomes. Here, a recently active miniature inverted-repeat transposon element (MITE) was identified in a derivative of ATCC 17978 after being sub...
Gespeichert in:
Veröffentlicht in: | mSphere 2019-02, Vol.4 (1) |
---|---|
Hauptverfasser: | , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
Zusammenfassung: | Insertion sequences (IS) are fundamental mediators of genome plasticity with the potential to generate phenotypic variation with significant evolutionary outcomes. Here, a recently active miniature inverted-repeat transposon element (MITE) was identified in a derivative of
ATCC 17978 after being subjected to stress conditions. Transposition of the novel element led to the disruption of the
gene, resulting in a characteristic hypermotile phenotype. DNA identity shared between the terminal inverted repeats of this MITE and coresident IS
elements, together with the generation of 9-bp target site duplications, provides strong evidence that IS
elements were responsible for mobilization of the MITE (designated MITE
) within this strain. A wider genome-level survey identified MITE
in 30 additional
genomes at various frequencies and one
genome. Ninety MITE
copies could be identified, of which 40% had target site duplications, indicating recent transposition events. Elements ranged between 111 and 114 bp; 90% were 113 bp in length. Using the MITE
consensus sequence, putative outward-facing
σ70 promoter sequences in both orientations were identified. The identification of transcripts originating from the promoter in one direction supports the proposal that the element can influence neighboring host gene transcription. The location of MITE
varied significantly between and within genomes, preferentially integrating into AT-rich regions. Additionally, a copy of MITE
was identified in a novel 8.5-kb composite transposon, Tn
, in the
CCUG 350 chromosome. Overall, this study shows that MITE
is the most abundant nonautonomous element currently found in
One of the most important weapons in the armory of
is its impressive genetic plasticity, facilitating rapid genetic mutations and rearrangements as well as integration of foreign determinants carried by mobile genetic elements. Of these, IS are considered one of the key forces shaping bacterial genomes and ultimately evolution. We report the identification of a novel nonautonomous IS-derived element present in multiple bacterial species from the
family and its recent translocation into the
locus in the
ATCC 17978 genome. The latter finding adds new knowledge to only a limited number of documented examples of MITEs in the literature and underscores the plastic nature of the
locus in
MITE
, and its predicted parent(s), may be a source of substantial adaptive evolution within environmental and clinically relevant bacterial path |
---|---|
ISSN: | 2379-5042 2379-5042 |
DOI: | 10.1128/mSphereDirect.00028-19 |