First Report of Nemesia ring necrosis virus in North America in Ornamental Plants from California

During the last several years, two California propagators have detected what was believed to be the tymovirus Scrophularia mottle virus (ScrMV) in several ornamental plant species on the basis of enzyme-linked immunosorbent assay (ELISA) using a ScrMV antibody system. Symptoms were generally mild, r...

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Veröffentlicht in:Plant disease 2006-09, Vol.90 (9), p.1263-1263
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description During the last several years, two California propagators have detected what was believed to be the tymovirus Scrophularia mottle virus (ScrMV) in several ornamental plant species on the basis of enzyme-linked immunosorbent assay (ELISA) using a ScrMV antibody system. Symptoms were generally mild, ranging from nonsymptomatic to a mild mosaic. Our laboratory confirmed the presence of a tymovirus in one Verbena sp. and two Diascia spp. cultivars on the basis of dsRNA analysis that showed bands of approximately 6,400 and 300 nucleotides representing the genomic and coat protein subgenomic RNAs, respectively. While these plants and those that were experimentally infected (Nicotiana benthamiana and N. clevelandii) also tested positive for ScrMV by ELISA, the host range did not match that published for ScrMV, notably the lack of symptoms in Chenopodium quinoa and the lack of systemic infection in Datura stramonium. A similar host range result was reported in Europe for another tymovirus that cross reacts with ScrMV antiserum, Nemesia ring necrosis virus (NeRNV) (2). Using NeRNV specific primers (1), we used reverse transcription-polymerase chain reaction (RT-PCR) to test plants that had previously tested positive for ScrMV by ELISA and had dsRNAs typical of a tymovirus. An amplicon of the appropriate size (960 bp) for NeRNV was obtained from each of five samples. Using ScrMV specific primers, the same samples failed to amplify the expected product. We have found NeRNV in three Diascia spp., one Verbena sp., and one Nemesia sp. plants in two counties in California (Riverside and San Diego). When the RT-PCR products were sequenced, they all had 99% sequence identities to NeRNV with 4 to 7 single nucleotide changes (GenBank Accession Nos. DQ648150 to DQ648154). Notably, each of the five amplicons had changes at nucleotides 5134 (G to C) and 5549 (G to T) when compared with the European isolates of NeRNV, which did not result in any amino acid changes. To our knowledge, this is the first report of NeRNV in North America and more specifically, in California. References: (1) R. Koenig et al. J. Gen. Virol. 86:1827, 2005. (2) A. L. Skelton et al. Plant Pathol. 53:798, 2004.
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Symptoms were generally mild, ranging from nonsymptomatic to a mild mosaic. Our laboratory confirmed the presence of a tymovirus in one Verbena sp. and two Diascia spp. cultivars on the basis of dsRNA analysis that showed bands of approximately 6,400 and 300 nucleotides representing the genomic and coat protein subgenomic RNAs, respectively. While these plants and those that were experimentally infected (Nicotiana benthamiana and N. clevelandii) also tested positive for ScrMV by ELISA, the host range did not match that published for ScrMV, notably the lack of symptoms in Chenopodium quinoa and the lack of systemic infection in Datura stramonium. A similar host range result was reported in Europe for another tymovirus that cross reacts with ScrMV antiserum, Nemesia ring necrosis virus (NeRNV) (2). Using NeRNV specific primers (1), we used reverse transcription-polymerase chain reaction (RT-PCR) to test plants that had previously tested positive for ScrMV by ELISA and had dsRNAs typical of a tymovirus. An amplicon of the appropriate size (960 bp) for NeRNV was obtained from each of five samples. Using ScrMV specific primers, the same samples failed to amplify the expected product. We have found NeRNV in three Diascia spp., one Verbena sp., and one Nemesia sp. plants in two counties in California (Riverside and San Diego). When the RT-PCR products were sequenced, they all had 99% sequence identities to NeRNV with 4 to 7 single nucleotide changes (GenBank Accession Nos. DQ648150 to DQ648154). Notably, each of the five amplicons had changes at nucleotides 5134 (G to C) and 5549 (G to T) when compared with the European isolates of NeRNV, which did not result in any amino acid changes. To our knowledge, this is the first report of NeRNV in North America and more specifically, in California. References: (1) R. Koenig et al. J. Gen. Virol. 86:1827, 2005. (2) A. L. Skelton et al. 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Symptoms were generally mild, ranging from nonsymptomatic to a mild mosaic. Our laboratory confirmed the presence of a tymovirus in one Verbena sp. and two Diascia spp. cultivars on the basis of dsRNA analysis that showed bands of approximately 6,400 and 300 nucleotides representing the genomic and coat protein subgenomic RNAs, respectively. While these plants and those that were experimentally infected (Nicotiana benthamiana and N. clevelandii) also tested positive for ScrMV by ELISA, the host range did not match that published for ScrMV, notably the lack of symptoms in Chenopodium quinoa and the lack of systemic infection in Datura stramonium. A similar host range result was reported in Europe for another tymovirus that cross reacts with ScrMV antiserum, Nemesia ring necrosis virus (NeRNV) (2). Using NeRNV specific primers (1), we used reverse transcription-polymerase chain reaction (RT-PCR) to test plants that had previously tested positive for ScrMV by ELISA and had dsRNAs typical of a tymovirus. An amplicon of the appropriate size (960 bp) for NeRNV was obtained from each of five samples. Using ScrMV specific primers, the same samples failed to amplify the expected product. We have found NeRNV in three Diascia spp., one Verbena sp., and one Nemesia sp. plants in two counties in California (Riverside and San Diego). When the RT-PCR products were sequenced, they all had 99% sequence identities to NeRNV with 4 to 7 single nucleotide changes (GenBank Accession Nos. DQ648150 to DQ648154). Notably, each of the five amplicons had changes at nucleotides 5134 (G to C) and 5549 (G to T) when compared with the European isolates of NeRNV, which did not result in any amino acid changes. To our knowledge, this is the first report of NeRNV in North America and more specifically, in California. References: (1) R. Koenig et al. J. Gen. Virol. 86:1827, 2005. (2) A. L. Skelton et al. Plant Pathol. 53:798, 2004.</description><subject>Chenopodium quinoa</subject><subject>coat proteins</subject><subject>Datura stramonium</subject><subject>Diascia</subject><subject>disease diagnosis</subject><subject>double-stranded RNA</subject><subject>enzyme-linked immunosorbent assay</subject><subject>host range</subject><subject>molecular sequence data</subject><subject>Nemesia</subject><subject>Nemesia ring necrosis virus</subject><subject>new geographic records</subject><subject>Nicotiana benthamiana</subject><subject>nucleotide sequences</subject><subject>nursery crops</subject><subject>ornamental plants</subject><subject>pathogen identification</subject><subject>pathogenicity</subject><subject>plant viruses</subject><subject>reverse transcriptase polymerase chain reaction</subject><subject>Scrophularia mottle virus</subject><subject>Scrophulariaceae</subject><subject>sequence analysis</subject><subject>Tymovirus</subject><subject>Verbena</subject><issn>0191-2917</issn><issn>1943-7692</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><recordid>eNp90MtKAzEUgOEgiq3VlXvNSgQZzW2SOcvSWhWKFi_rEGcSjcylJlPBtzel1aWrHMLHSfgROqbkkhIQV4tpBiSjTPLJDhpSEDxTEtguGhIKNGNA1QAdxPhBCBFCFvtowIkqKGVsiMzMh9jjR7vsQo87h-9tY6M3OPj2Dbe2DF30EX_5sIrYt_g-sXc8bmzwpVlfPITWNLbtTY0XtWn7iF3oGjwxtXddaL05RHvO1NEebc8RepldP09us_nDzd1kPM9KpkSfMV7lVjqjSMEr53hRqoqKXACToDiUucyLAoBUBXHCVAocqNwJJitmrGDAR-h8s3cZus-Vjb1ufCxtnT5lu1XUjBaCcgk5SfTsX0qBc5riJXixgesMMVinl8E3JnxrSvQ6vl5MNaRxHT_pk-3a1Wtjqz_7WzuB0w1wptPmLfioX54YoZwQJaRMr_4AbFmHEw</recordid><startdate>20060901</startdate><enddate>20060901</enddate><creator>Mathews, D.M</creator><creator>Dodds, J.A</creator><scope>FBQ</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T7</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20060901</creationdate><title>First Report of Nemesia ring necrosis virus in North America in Ornamental Plants from California</title><author>Mathews, D.M ; Dodds, J.A</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c274t-23d5e6fa7083dff38c7d14549269739c56588990d80f4ad79f975f426d2ae4293</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Chenopodium quinoa</topic><topic>coat proteins</topic><topic>Datura stramonium</topic><topic>Diascia</topic><topic>disease diagnosis</topic><topic>double-stranded RNA</topic><topic>enzyme-linked immunosorbent assay</topic><topic>host range</topic><topic>molecular sequence data</topic><topic>Nemesia</topic><topic>Nemesia ring necrosis virus</topic><topic>new geographic records</topic><topic>Nicotiana benthamiana</topic><topic>nucleotide sequences</topic><topic>nursery crops</topic><topic>ornamental plants</topic><topic>pathogen identification</topic><topic>pathogenicity</topic><topic>plant viruses</topic><topic>reverse transcriptase polymerase chain reaction</topic><topic>Scrophularia mottle virus</topic><topic>Scrophulariaceae</topic><topic>sequence analysis</topic><topic>Tymovirus</topic><topic>Verbena</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Mathews, D.M</creatorcontrib><creatorcontrib>Dodds, J.A</creatorcontrib><collection>AGRIS</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Plant disease</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Mathews, D.M</au><au>Dodds, J.A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>First Report of Nemesia ring necrosis virus in North America in Ornamental Plants from California</atitle><jtitle>Plant disease</jtitle><addtitle>Plant Dis</addtitle><date>2006-09-01</date><risdate>2006</risdate><volume>90</volume><issue>9</issue><spage>1263</spage><epage>1263</epage><pages>1263-1263</pages><issn>0191-2917</issn><eissn>1943-7692</eissn><abstract>During the last several years, two California propagators have detected what was believed to be the tymovirus Scrophularia mottle virus (ScrMV) in several ornamental plant species on the basis of enzyme-linked immunosorbent assay (ELISA) using a ScrMV antibody system. Symptoms were generally mild, ranging from nonsymptomatic to a mild mosaic. Our laboratory confirmed the presence of a tymovirus in one Verbena sp. and two Diascia spp. cultivars on the basis of dsRNA analysis that showed bands of approximately 6,400 and 300 nucleotides representing the genomic and coat protein subgenomic RNAs, respectively. While these plants and those that were experimentally infected (Nicotiana benthamiana and N. clevelandii) also tested positive for ScrMV by ELISA, the host range did not match that published for ScrMV, notably the lack of symptoms in Chenopodium quinoa and the lack of systemic infection in Datura stramonium. A similar host range result was reported in Europe for another tymovirus that cross reacts with ScrMV antiserum, Nemesia ring necrosis virus (NeRNV) (2). Using NeRNV specific primers (1), we used reverse transcription-polymerase chain reaction (RT-PCR) to test plants that had previously tested positive for ScrMV by ELISA and had dsRNAs typical of a tymovirus. An amplicon of the appropriate size (960 bp) for NeRNV was obtained from each of five samples. Using ScrMV specific primers, the same samples failed to amplify the expected product. We have found NeRNV in three Diascia spp., one Verbena sp., and one Nemesia sp. plants in two counties in California (Riverside and San Diego). When the RT-PCR products were sequenced, they all had 99% sequence identities to NeRNV with 4 to 7 single nucleotide changes (GenBank Accession Nos. DQ648150 to DQ648154). Notably, each of the five amplicons had changes at nucleotides 5134 (G to C) and 5549 (G to T) when compared with the European isolates of NeRNV, which did not result in any amino acid changes. To our knowledge, this is the first report of NeRNV in North America and more specifically, in California. References: (1) R. Koenig et al. J. Gen. Virol. 86:1827, 2005. (2) A. L. Skelton et al. Plant Pathol. 53:798, 2004.</abstract><cop>United States</cop><pmid>30781122</pmid><doi>10.1094/PD-90-1263C</doi><tpages>1</tpages><oa>free_for_read</oa></addata></record>
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subjects Chenopodium quinoa
coat proteins
Datura stramonium
Diascia
disease diagnosis
double-stranded RNA
enzyme-linked immunosorbent assay
host range
molecular sequence data
Nemesia
Nemesia ring necrosis virus
new geographic records
Nicotiana benthamiana
nucleotide sequences
nursery crops
ornamental plants
pathogen identification
pathogenicity
plant viruses
reverse transcriptase polymerase chain reaction
Scrophularia mottle virus
Scrophulariaceae
sequence analysis
Tymovirus
Verbena
title First Report of Nemesia ring necrosis virus in North America in Ornamental Plants from California
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