Geographical Distribution, Pathotype Characterization, and Molecular Diversity of Colletotrichum lindemuthianum in Greece and Resistance of Greek Bean Cultivars
Thirty-five Colletotrichum lindemuthianum isolates were obtained from bean (Phaseolus vulgaris) fields in 23 prefectures of Greece during a survey conducted in 2003 and 2004. Race characterization based on the standardized set of 12 differential cultivars demonstrated the presence of races 2, 6, and...
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Veröffentlicht in: | Plant disease 2007-11, Vol.91 (11), p.1379-1385 |
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description | Thirty-five Colletotrichum lindemuthianum isolates were obtained from bean (Phaseolus vulgaris) fields in 23 prefectures of Greece during a survey conducted in 2003 and 2004. Race characterization based on the standardized set of 12 differential cultivars demonstrated the presence of races 2, 6, and 22, which are reported for first time in Greece, while race 22 is reported for the first time in the world. In addition, pathotype diversity showed significant correlation with the geographical origin of these isolates. All three races caused disease symptoms only on cultivars of Andean origin, suggesting that Greek isolates originated from South American countries. Virulence spectrum of the same isolates was also examined on a set of 30 Greek bean cultivars showing seven types of virulence. Based on their reactions to the pathogen isolates, Greek cultivars were divided into nine groups. Among these cultivars, two (Ithomi FS60 and Larisa) were resistant to all tested isolates, including the reference isolates. Molecular diversity was detected using random amplified polymorphic DNA (RAPD) primers and the restriction fragment length polymorphism (RFLP) analysis of the ribosomal DNA internal transcribed spacers, which revealed two main clusters of isolates. Thirty-two out of 35 isolates belonged to the same main cluster in both methods, indicating that Greek isolates have genotypic similarities. This study provides the information on population diversity of C. lindemuthianum, which can be useful in agricultural practices and in plant breeding programs. |
doi_str_mv | 10.1094/PDIS-91-11-1379 |
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Race characterization based on the standardized set of 12 differential cultivars demonstrated the presence of races 2, 6, and 22, which are reported for first time in Greece, while race 22 is reported for the first time in the world. In addition, pathotype diversity showed significant correlation with the geographical origin of these isolates. All three races caused disease symptoms only on cultivars of Andean origin, suggesting that Greek isolates originated from South American countries. Virulence spectrum of the same isolates was also examined on a set of 30 Greek bean cultivars showing seven types of virulence. Based on their reactions to the pathogen isolates, Greek cultivars were divided into nine groups. Among these cultivars, two (Ithomi FS60 and Larisa) were resistant to all tested isolates, including the reference isolates. Molecular diversity was detected using random amplified polymorphic DNA (RAPD) primers and the restriction fragment length polymorphism (RFLP) analysis of the ribosomal DNA internal transcribed spacers, which revealed two main clusters of isolates. Thirty-two out of 35 isolates belonged to the same main cluster in both methods, indicating that Greek isolates have genotypic similarities. This study provides the information on population diversity of C. lindemuthianum, which can be useful in agricultural practices and in plant breeding programs.</description><identifier>ISSN: 0191-2917</identifier><identifier>EISSN: 1943-7692</identifier><identifier>DOI: 10.1094/PDIS-91-11-1379</identifier><identifier>PMID: 30780739</identifier><identifier>CODEN: PLDIDE</identifier><language>eng</language><publisher>St. Paul, MN: American Phytopathological Society</publisher><subject>anthracnose ; beans ; Biological and medical sciences ; Colletotrichum lindemuthianum ; cultivars ; Fundamental and applied biological sciences. Psychology ; Fungal plant pathogens ; genetic variation ; geographical variation ; internal transcribed spacers ; molecular sequence data ; pathotypes ; Phaseolus ; Phaseolus vulgaris ; Phytopathology. Animal pests. Plant and forest protection ; population genetics ; random amplified polymorphic DNA technique ; restriction fragment length polymorphism ; ribosomal DNA ; strain differences ; strains ; virulence</subject><ispartof>Plant disease, 2007-11, Vol.91 (11), p.1379-1385</ispartof><rights>2007 INIST-CNRS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c423t-183ac52152c9fcd02a07845d625d2f85e5a816c4726423c19544d691be0a49c13</citedby><cites>FETCH-LOGICAL-c423t-183ac52152c9fcd02a07845d625d2f85e5a816c4726423c19544d691be0a49c13</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,3711,27903,27904</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=19190311$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30780739$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Bardas, G.A</creatorcontrib><creatorcontrib>Koutita, O</creatorcontrib><creatorcontrib>Tzavella-Klonari, K</creatorcontrib><title>Geographical Distribution, Pathotype Characterization, and Molecular Diversity of Colletotrichum lindemuthianum in Greece and Resistance of Greek Bean Cultivars</title><title>Plant disease</title><addtitle>Plant Dis</addtitle><description>Thirty-five Colletotrichum lindemuthianum isolates were obtained from bean (Phaseolus vulgaris) fields in 23 prefectures of Greece during a survey conducted in 2003 and 2004. Race characterization based on the standardized set of 12 differential cultivars demonstrated the presence of races 2, 6, and 22, which are reported for first time in Greece, while race 22 is reported for the first time in the world. In addition, pathotype diversity showed significant correlation with the geographical origin of these isolates. All three races caused disease symptoms only on cultivars of Andean origin, suggesting that Greek isolates originated from South American countries. Virulence spectrum of the same isolates was also examined on a set of 30 Greek bean cultivars showing seven types of virulence. Based on their reactions to the pathogen isolates, Greek cultivars were divided into nine groups. Among these cultivars, two (Ithomi FS60 and Larisa) were resistant to all tested isolates, including the reference isolates. Molecular diversity was detected using random amplified polymorphic DNA (RAPD) primers and the restriction fragment length polymorphism (RFLP) analysis of the ribosomal DNA internal transcribed spacers, which revealed two main clusters of isolates. Thirty-two out of 35 isolates belonged to the same main cluster in both methods, indicating that Greek isolates have genotypic similarities. This study provides the information on population diversity of C. lindemuthianum, which can be useful in agricultural practices and in plant breeding programs.</description><subject>anthracnose</subject><subject>beans</subject><subject>Biological and medical sciences</subject><subject>Colletotrichum lindemuthianum</subject><subject>cultivars</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Fungal plant pathogens</subject><subject>genetic variation</subject><subject>geographical variation</subject><subject>internal transcribed spacers</subject><subject>molecular sequence data</subject><subject>pathotypes</subject><subject>Phaseolus</subject><subject>Phaseolus vulgaris</subject><subject>Phytopathology. Animal pests. Plant and forest protection</subject><subject>population genetics</subject><subject>random amplified polymorphic DNA technique</subject><subject>restriction fragment length polymorphism</subject><subject>ribosomal DNA</subject><subject>strain differences</subject><subject>strains</subject><subject>virulence</subject><issn>0191-2917</issn><issn>1943-7692</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><recordid>eNp9kU9v1DAQxS0EotvCmRv4AuJAqMd2_vgIaVkqFVFReo5mHacxeOOt7VRaPg0fFS-7wA1pJGv0fvNG40fIM2BvgSl5enV2cV0oKCCXqNUDsgAlRVFXij8kCwZZ4grqI3Ic4zfGmJRV85gcCVY3rBZqQX4ujb8NuBmtRkfPbEzBruZk_fSGXmEafdpuDG1HDKiTCfYH7jWcevrJO6NnhyHP3ZsQbdpSP9DWO2eSz0Z6nNfU2ak36zmNFqfc2okugzHa_Lb4YmJeiVNu8-RO-E7fG5xoO7tk7zHEJ-TRgC6ap4f3hNx8OP_afiwuPy8v2neXhZZcpAIagbrkUHKtBt0zjvlEWfYVL3s-NKUpsYFKy5pXmdegSin7SsHKMJRKgzghr_e-m-DvZhNTt7ZRG-dwMn6OHYdGgqjKqsnoq_-jTDasUnUGT_egDj7GYIZuE-waw7YD1u3y63b5dQo6yJXzyxPPD9bzam36v_yfwDLw8gBgzIkNIf-djf98FSgmYHfOiz03oO_wNmTm5pozEIw1ogFei1-nyq46</recordid><startdate>20071101</startdate><enddate>20071101</enddate><creator>Bardas, G.A</creator><creator>Koutita, O</creator><creator>Tzavella-Klonari, K</creator><general>American Phytopathological Society</general><scope>FBQ</scope><scope>IQODW</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T7</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>M7N</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>20071101</creationdate><title>Geographical Distribution, Pathotype Characterization, and Molecular Diversity of Colletotrichum lindemuthianum in Greece and Resistance of Greek Bean Cultivars</title><author>Bardas, G.A ; Koutita, O ; Tzavella-Klonari, K</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c423t-183ac52152c9fcd02a07845d625d2f85e5a816c4726423c19544d691be0a49c13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>anthracnose</topic><topic>beans</topic><topic>Biological and medical sciences</topic><topic>Colletotrichum lindemuthianum</topic><topic>cultivars</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Fungal plant pathogens</topic><topic>genetic variation</topic><topic>geographical variation</topic><topic>internal transcribed spacers</topic><topic>molecular sequence data</topic><topic>pathotypes</topic><topic>Phaseolus</topic><topic>Phaseolus vulgaris</topic><topic>Phytopathology. Animal pests. Plant and forest protection</topic><topic>population genetics</topic><topic>random amplified polymorphic DNA technique</topic><topic>restriction fragment length polymorphism</topic><topic>ribosomal DNA</topic><topic>strain differences</topic><topic>strains</topic><topic>virulence</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Bardas, G.A</creatorcontrib><creatorcontrib>Koutita, O</creatorcontrib><creatorcontrib>Tzavella-Klonari, K</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Plant disease</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Bardas, G.A</au><au>Koutita, O</au><au>Tzavella-Klonari, K</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Geographical Distribution, Pathotype Characterization, and Molecular Diversity of Colletotrichum lindemuthianum in Greece and Resistance of Greek Bean Cultivars</atitle><jtitle>Plant disease</jtitle><addtitle>Plant Dis</addtitle><date>2007-11-01</date><risdate>2007</risdate><volume>91</volume><issue>11</issue><spage>1379</spage><epage>1385</epage><pages>1379-1385</pages><issn>0191-2917</issn><eissn>1943-7692</eissn><coden>PLDIDE</coden><abstract>Thirty-five Colletotrichum lindemuthianum isolates were obtained from bean (Phaseolus vulgaris) fields in 23 prefectures of Greece during a survey conducted in 2003 and 2004. Race characterization based on the standardized set of 12 differential cultivars demonstrated the presence of races 2, 6, and 22, which are reported for first time in Greece, while race 22 is reported for the first time in the world. In addition, pathotype diversity showed significant correlation with the geographical origin of these isolates. All three races caused disease symptoms only on cultivars of Andean origin, suggesting that Greek isolates originated from South American countries. Virulence spectrum of the same isolates was also examined on a set of 30 Greek bean cultivars showing seven types of virulence. Based on their reactions to the pathogen isolates, Greek cultivars were divided into nine groups. Among these cultivars, two (Ithomi FS60 and Larisa) were resistant to all tested isolates, including the reference isolates. Molecular diversity was detected using random amplified polymorphic DNA (RAPD) primers and the restriction fragment length polymorphism (RFLP) analysis of the ribosomal DNA internal transcribed spacers, which revealed two main clusters of isolates. Thirty-two out of 35 isolates belonged to the same main cluster in both methods, indicating that Greek isolates have genotypic similarities. This study provides the information on population diversity of C. lindemuthianum, which can be useful in agricultural practices and in plant breeding programs.</abstract><cop>St. Paul, MN</cop><pub>American Phytopathological Society</pub><pmid>30780739</pmid><doi>10.1094/PDIS-91-11-1379</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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subjects | anthracnose beans Biological and medical sciences Colletotrichum lindemuthianum cultivars Fundamental and applied biological sciences. Psychology Fungal plant pathogens genetic variation geographical variation internal transcribed spacers molecular sequence data pathotypes Phaseolus Phaseolus vulgaris Phytopathology. Animal pests. Plant and forest protection population genetics random amplified polymorphic DNA technique restriction fragment length polymorphism ribosomal DNA strain differences strains virulence |
title | Geographical Distribution, Pathotype Characterization, and Molecular Diversity of Colletotrichum lindemuthianum in Greece and Resistance of Greek Bean Cultivars |
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