A machine learning approach for distinguishing uterine sarcoma from leiomyomas based on perfusion weighted MRI parameters

•None of PWI parameters differed significantly between uterine sarcoma and leiomyomas.•Using a machine-learning method, PWI parameters were aggregated.•Computer was 92% accurate in uterine sarcoma/ leiomyomas classification. To propose a computer-assisted method for distinguishing uterine sarcoma fr...

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Veröffentlicht in:European journal of radiology 2019-01, Vol.110, p.203-211
Hauptverfasser: Malek, Mahrooz, Gity, Masoumeh, Alidoosti, Azadeh, Oghabian, Zeinab, Rahimifar, Pariya, Seyed Ebrahimi, Seyede Mahdieh, Tabibian, Elnaz, Oghabian, Mohammad Ali
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container_title European journal of radiology
container_volume 110
creator Malek, Mahrooz
Gity, Masoumeh
Alidoosti, Azadeh
Oghabian, Zeinab
Rahimifar, Pariya
Seyed Ebrahimi, Seyede Mahdieh
Tabibian, Elnaz
Oghabian, Mohammad Ali
description •None of PWI parameters differed significantly between uterine sarcoma and leiomyomas.•Using a machine-learning method, PWI parameters were aggregated.•Computer was 92% accurate in uterine sarcoma/ leiomyomas classification. To propose a computer-assisted method for distinguishing uterine sarcoma from leiomyomas based on perfusion weighted magnetic resonance imaging (PWI). Forty-two women confirmed to have a total of 60 masses (10 uterine sarcomas and 50 benign leiomyomas) were included. The reference diagnosis was based on postoperative histopathological examination. All women underwent the standard MRI protocol with 3-Tesla MR imager (Magnetom Trio, Siemens, Erlangen, Germany) for assessment of myometrial masses, followed by PWI. For each mass, two regions of interest (ROI) were outlined manually by an experienced radiologist; one (ROIL) represented the entire tumor while the other (ROIs) was placed on the area of the lesion with the most marked contrast enhancement. Two additional ROIs with diameters similar to ROIs (3.0 to 3.1 mm) were placed on psoas muscle (ROIP) and myometrium (ROIM) in order to provide baselines for comparisons. The obtained ROIs of PWI images were then analyzed using the DCE Tool plug-in (version 2.0SP1) within ClearCanvas (Toronto, Ontario, Canada) framework. The DCE Tool provides seven parameters (Ktrans, kep, Vb, IAUC, initial slope, peak, the mean squared error) for modelling contrast uptake within an ROI using the modified Tofts model. Parameters extracted from the ROIs were fed into a decision tree ensemble, which classified the corresponding lesions either as malignant or benign. The leave-one-out cross validation (LOOCV) was utilized to evaluate the performance of the classifier. None of the parameters extracted from ROIL or ROIs differed significantly between uterine sarcoma and benign leiomyomas (all p > 0.05). The overall accuracy of 66.7% was obtained by feeding seven parameters extracted from ROIL to the classifier. When 21 features extracted from ROIL, ROIM, and ROIP were fed into the classifier an accuracy of 91.7%, sensitivity of 100%, and specificity of 90% were achieved in the optimal operating point of classifier. Although none of the PWI parameters differed significantly between benign and malignant lesions, when the information provided by the extracted features was aggregated using a machine learning method, a promising discriminative power was obtained. This suggests that the proposed model for combining the
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To propose a computer-assisted method for distinguishing uterine sarcoma from leiomyomas based on perfusion weighted magnetic resonance imaging (PWI). Forty-two women confirmed to have a total of 60 masses (10 uterine sarcomas and 50 benign leiomyomas) were included. The reference diagnosis was based on postoperative histopathological examination. All women underwent the standard MRI protocol with 3-Tesla MR imager (Magnetom Trio, Siemens, Erlangen, Germany) for assessment of myometrial masses, followed by PWI. For each mass, two regions of interest (ROI) were outlined manually by an experienced radiologist; one (ROIL) represented the entire tumor while the other (ROIs) was placed on the area of the lesion with the most marked contrast enhancement. Two additional ROIs with diameters similar to ROIs (3.0 to 3.1 mm) were placed on psoas muscle (ROIP) and myometrium (ROIM) in order to provide baselines for comparisons. The obtained ROIs of PWI images were then analyzed using the DCE Tool plug-in (version 2.0SP1) within ClearCanvas (Toronto, Ontario, Canada) framework. The DCE Tool provides seven parameters (Ktrans, kep, Vb, IAUC, initial slope, peak, the mean squared error) for modelling contrast uptake within an ROI using the modified Tofts model. Parameters extracted from the ROIs were fed into a decision tree ensemble, which classified the corresponding lesions either as malignant or benign. The leave-one-out cross validation (LOOCV) was utilized to evaluate the performance of the classifier. None of the parameters extracted from ROIL or ROIs differed significantly between uterine sarcoma and benign leiomyomas (all p &gt; 0.05). The overall accuracy of 66.7% was obtained by feeding seven parameters extracted from ROIL to the classifier. When 21 features extracted from ROIL, ROIM, and ROIP were fed into the classifier an accuracy of 91.7%, sensitivity of 100%, and specificity of 90% were achieved in the optimal operating point of classifier. Although none of the PWI parameters differed significantly between benign and malignant lesions, when the information provided by the extracted features was aggregated using a machine learning method, a promising discriminative power was obtained. 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To propose a computer-assisted method for distinguishing uterine sarcoma from leiomyomas based on perfusion weighted magnetic resonance imaging (PWI). Forty-two women confirmed to have a total of 60 masses (10 uterine sarcomas and 50 benign leiomyomas) were included. The reference diagnosis was based on postoperative histopathological examination. All women underwent the standard MRI protocol with 3-Tesla MR imager (Magnetom Trio, Siemens, Erlangen, Germany) for assessment of myometrial masses, followed by PWI. For each mass, two regions of interest (ROI) were outlined manually by an experienced radiologist; one (ROIL) represented the entire tumor while the other (ROIs) was placed on the area of the lesion with the most marked contrast enhancement. Two additional ROIs with diameters similar to ROIs (3.0 to 3.1 mm) were placed on psoas muscle (ROIP) and myometrium (ROIM) in order to provide baselines for comparisons. 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This suggests that the proposed model for combining the PWI parameters is potentially useful for differentiating uterine sarcoma from leiomyomas.</description><subject>Adult</subject><subject>Computer-aided diagnosis</subject><subject>Diagnosis, Differential</subject><subject>Female</subject><subject>Humans</subject><subject>Image Processing, Computer-Assisted - methods</subject><subject>Leiomyoma - diagnostic imaging</subject><subject>Leiomyoma - pathology</subject><subject>Leiomyomas</subject><subject>Machine Learning</subject><subject>Magnetic resonance imaging</subject><subject>Magnetic Resonance Imaging - methods</subject><subject>Middle Aged</subject><subject>Perfusion weighted imaging</subject><subject>Reproducibility of Results</subject><subject>Sarcoma - diagnostic imaging</subject><subject>Sarcoma - pathology</subject><subject>Sensitivity and Specificity</subject><subject>Uterine Neoplasms - diagnostic imaging</subject><subject>Uterine Neoplasms - pathology</subject><subject>Uterine sarcoma</subject><issn>0720-048X</issn><issn>1872-7727</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2019</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kM1q3DAUhUVpSSZpnqBQtOzG7pVs_cwiixCSNJBSKC10J2TpOqNhbDmSnTBvX00n7bIrSUfnnMv9CPnAoGbA5Odtjdtkfc2B6ZqxGmD9hqyYVrxSiqu3ZAWKQwWt_nVKznLeAoBo1_yEnDYg1mst2Yrsr-hg3SaMSHdo0xjGR2qnKcUi0j4m6kOei7iEvDn8LTOmgznb5OJgaZ_iUJIhDvvyzLSzGT2NI50w9UsO5faC4XEzF_Xr93s62WQHLCX5PXnX213Gi9fznPy8vflx_aV6-HZ3f331ULmWi7mSqgXdWesYKg9Np6WVHRO28dp5JcC1jfBSae68kOA1NNi2yiFIBtwJ2ZyTT8festTTgnk2Q8gOdzs7Ylyy4UxyVYoEFGtztLoUc07YmymFwaa9YWAOzM3W_GFuDswNY6YwL6mPrwOWbkD_L_MXcjFcHg1Y1nwOmEx2AUeHPiR0s_Ex_HfAb2NzlXU</recordid><startdate>201901</startdate><enddate>201901</enddate><creator>Malek, Mahrooz</creator><creator>Gity, Masoumeh</creator><creator>Alidoosti, Azadeh</creator><creator>Oghabian, Zeinab</creator><creator>Rahimifar, Pariya</creator><creator>Seyed Ebrahimi, Seyede Mahdieh</creator><creator>Tabibian, Elnaz</creator><creator>Oghabian, Mohammad Ali</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>201901</creationdate><title>A machine learning approach for distinguishing uterine sarcoma from leiomyomas based on perfusion weighted MRI parameters</title><author>Malek, Mahrooz ; Gity, Masoumeh ; Alidoosti, Azadeh ; Oghabian, Zeinab ; Rahimifar, Pariya ; Seyed Ebrahimi, Seyede Mahdieh ; Tabibian, Elnaz ; Oghabian, Mohammad Ali</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c425t-67408baac1e7d03b86a6b15a3d8cd750c435d6782cd560d803e447ce06102c563</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2019</creationdate><topic>Adult</topic><topic>Computer-aided diagnosis</topic><topic>Diagnosis, Differential</topic><topic>Female</topic><topic>Humans</topic><topic>Image Processing, Computer-Assisted - methods</topic><topic>Leiomyoma - diagnostic imaging</topic><topic>Leiomyoma - pathology</topic><topic>Leiomyomas</topic><topic>Machine Learning</topic><topic>Magnetic resonance imaging</topic><topic>Magnetic Resonance Imaging - methods</topic><topic>Middle Aged</topic><topic>Perfusion weighted imaging</topic><topic>Reproducibility of Results</topic><topic>Sarcoma - diagnostic imaging</topic><topic>Sarcoma - pathology</topic><topic>Sensitivity and Specificity</topic><topic>Uterine Neoplasms - diagnostic imaging</topic><topic>Uterine Neoplasms - pathology</topic><topic>Uterine sarcoma</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Malek, Mahrooz</creatorcontrib><creatorcontrib>Gity, Masoumeh</creatorcontrib><creatorcontrib>Alidoosti, Azadeh</creatorcontrib><creatorcontrib>Oghabian, Zeinab</creatorcontrib><creatorcontrib>Rahimifar, Pariya</creatorcontrib><creatorcontrib>Seyed Ebrahimi, Seyede Mahdieh</creatorcontrib><creatorcontrib>Tabibian, Elnaz</creatorcontrib><creatorcontrib>Oghabian, Mohammad Ali</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>European journal of radiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Malek, Mahrooz</au><au>Gity, Masoumeh</au><au>Alidoosti, Azadeh</au><au>Oghabian, Zeinab</au><au>Rahimifar, Pariya</au><au>Seyed Ebrahimi, Seyede Mahdieh</au><au>Tabibian, Elnaz</au><au>Oghabian, Mohammad Ali</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A machine learning approach for distinguishing uterine sarcoma from leiomyomas based on perfusion weighted MRI parameters</atitle><jtitle>European journal of radiology</jtitle><addtitle>Eur J Radiol</addtitle><date>2019-01</date><risdate>2019</risdate><volume>110</volume><spage>203</spage><epage>211</epage><pages>203-211</pages><issn>0720-048X</issn><eissn>1872-7727</eissn><abstract>•None of PWI parameters differed significantly between uterine sarcoma and leiomyomas.•Using a machine-learning method, PWI parameters were aggregated.•Computer was 92% accurate in uterine sarcoma/ leiomyomas classification. To propose a computer-assisted method for distinguishing uterine sarcoma from leiomyomas based on perfusion weighted magnetic resonance imaging (PWI). Forty-two women confirmed to have a total of 60 masses (10 uterine sarcomas and 50 benign leiomyomas) were included. The reference diagnosis was based on postoperative histopathological examination. All women underwent the standard MRI protocol with 3-Tesla MR imager (Magnetom Trio, Siemens, Erlangen, Germany) for assessment of myometrial masses, followed by PWI. For each mass, two regions of interest (ROI) were outlined manually by an experienced radiologist; one (ROIL) represented the entire tumor while the other (ROIs) was placed on the area of the lesion with the most marked contrast enhancement. Two additional ROIs with diameters similar to ROIs (3.0 to 3.1 mm) were placed on psoas muscle (ROIP) and myometrium (ROIM) in order to provide baselines for comparisons. The obtained ROIs of PWI images were then analyzed using the DCE Tool plug-in (version 2.0SP1) within ClearCanvas (Toronto, Ontario, Canada) framework. The DCE Tool provides seven parameters (Ktrans, kep, Vb, IAUC, initial slope, peak, the mean squared error) for modelling contrast uptake within an ROI using the modified Tofts model. Parameters extracted from the ROIs were fed into a decision tree ensemble, which classified the corresponding lesions either as malignant or benign. The leave-one-out cross validation (LOOCV) was utilized to evaluate the performance of the classifier. None of the parameters extracted from ROIL or ROIs differed significantly between uterine sarcoma and benign leiomyomas (all p &gt; 0.05). The overall accuracy of 66.7% was obtained by feeding seven parameters extracted from ROIL to the classifier. When 21 features extracted from ROIL, ROIM, and ROIP were fed into the classifier an accuracy of 91.7%, sensitivity of 100%, and specificity of 90% were achieved in the optimal operating point of classifier. Although none of the PWI parameters differed significantly between benign and malignant lesions, when the information provided by the extracted features was aggregated using a machine learning method, a promising discriminative power was obtained. This suggests that the proposed model for combining the PWI parameters is potentially useful for differentiating uterine sarcoma from leiomyomas.</abstract><cop>Ireland</cop><pub>Elsevier B.V</pub><pmid>30599861</pmid><doi>10.1016/j.ejrad.2018.11.009</doi><tpages>9</tpages></addata></record>
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subjects Adult
Computer-aided diagnosis
Diagnosis, Differential
Female
Humans
Image Processing, Computer-Assisted - methods
Leiomyoma - diagnostic imaging
Leiomyoma - pathology
Leiomyomas
Machine Learning
Magnetic resonance imaging
Magnetic Resonance Imaging - methods
Middle Aged
Perfusion weighted imaging
Reproducibility of Results
Sarcoma - diagnostic imaging
Sarcoma - pathology
Sensitivity and Specificity
Uterine Neoplasms - diagnostic imaging
Uterine Neoplasms - pathology
Uterine sarcoma
title A machine learning approach for distinguishing uterine sarcoma from leiomyomas based on perfusion weighted MRI parameters
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