Revealing of MicroRNA Involved Regulatory Gene Networks on Terpenoid Biosynthesis in Camellia sinensis in Different Growing Time Points
Tea, made from leaves of Camellia sinensis, has long been consumed worldwide for its unique taste and aroma. Terpenoids play important roles not only in tea beverage aroma formation, but also in the productivity and quality of tea plantation due to their significant contribution to light harvesting...
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| Veröffentlicht in: | Journal of agricultural and food chemistry 2018-11, Vol.66 (47), p.12604-12616 |
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| container_issue | 47 |
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| container_title | Journal of agricultural and food chemistry |
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| creator | Zhao, Shiqi Wang, Xuewen Yan, Xiaomei Guo, Lingxiao Mi, Xiaozeng Xu, Qingshan Zhu, Junyan Wu, Ailin Liu, Linlin Wei, Chaoling |
| description | Tea, made from leaves of Camellia sinensis, has long been consumed worldwide for its unique taste and aroma. Terpenoids play important roles not only in tea beverage aroma formation, but also in the productivity and quality of tea plantation due to their significant contribution to light harvesting pigments and phytohormones. To date, however, the regulation of terpenoid synthase genes remains unclear. Herein, the analyses of metabolomics, sRNAs, degradome, and transcriptomics were performed and integrated for identifying key regulatory miRNA-target circuits on terpenoid biosynthesis in leaf tissues over five different months in which the amount of terpenoids in tea leaves varies greatly. Four classes of miRNA-TF pairs that might play a central role in the regulation of terpenoid biosynthesis were also uncovered. Ultimately, a hypothetical model was proposed that mature miRNAs maintained by light regulator at both the transcriptional and posttranscriptional levels negatively regulate the targets to control terpenoid biosynthesis. |
| doi_str_mv | 10.1021/acs.jafc.8b05345 |
| format | Article |
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Terpenoids play important roles not only in tea beverage aroma formation, but also in the productivity and quality of tea plantation due to their significant contribution to light harvesting pigments and phytohormones. To date, however, the regulation of terpenoid synthase genes remains unclear. Herein, the analyses of metabolomics, sRNAs, degradome, and transcriptomics were performed and integrated for identifying key regulatory miRNA-target circuits on terpenoid biosynthesis in leaf tissues over five different months in which the amount of terpenoids in tea leaves varies greatly. Four classes of miRNA-TF pairs that might play a central role in the regulation of terpenoid biosynthesis were also uncovered. Ultimately, a hypothetical model was proposed that mature miRNAs maintained by light regulator at both the transcriptional and posttranscriptional levels negatively regulate the targets to control terpenoid biosynthesis.</description><identifier>ISSN: 0021-8561</identifier><identifier>EISSN: 1520-5118</identifier><identifier>DOI: 10.1021/acs.jafc.8b05345</identifier><identifier>PMID: 30400742</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Alkyl and Aryl Transferases - genetics ; Alkyl and Aryl Transferases - metabolism ; Camellia sinensis - chemistry ; Camellia sinensis - genetics ; Camellia sinensis - growth & development ; Camellia sinensis - metabolism ; Gene Expression Regulation, Plant ; MicroRNAs - genetics ; MicroRNAs - metabolism ; Plant Leaves - chemistry ; Plant Leaves - genetics ; Plant Leaves - growth & development ; Plant Leaves - metabolism ; Plant Proteins - genetics ; Plant Proteins - metabolism ; Terpenes - metabolism ; Time Factors</subject><ispartof>Journal of agricultural and food chemistry, 2018-11, Vol.66 (47), p.12604-12616</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a402t-20b401c343753d7a8f4047bc32bc9a2c74235daab33cfc9b027bf298aae4476d3</citedby><cites>FETCH-LOGICAL-a402t-20b401c343753d7a8f4047bc32bc9a2c74235daab33cfc9b027bf298aae4476d3</cites><orcidid>0000-0003-1300-2016</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/acs.jafc.8b05345$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/acs.jafc.8b05345$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>314,777,781,2752,27057,27905,27906,56719,56769</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30400742$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Zhao, Shiqi</creatorcontrib><creatorcontrib>Wang, Xuewen</creatorcontrib><creatorcontrib>Yan, Xiaomei</creatorcontrib><creatorcontrib>Guo, Lingxiao</creatorcontrib><creatorcontrib>Mi, Xiaozeng</creatorcontrib><creatorcontrib>Xu, Qingshan</creatorcontrib><creatorcontrib>Zhu, Junyan</creatorcontrib><creatorcontrib>Wu, Ailin</creatorcontrib><creatorcontrib>Liu, Linlin</creatorcontrib><creatorcontrib>Wei, Chaoling</creatorcontrib><title>Revealing of MicroRNA Involved Regulatory Gene Networks on Terpenoid Biosynthesis in Camellia sinensis in Different Growing Time Points</title><title>Journal of agricultural and food chemistry</title><addtitle>J. Agric. Food Chem</addtitle><description>Tea, made from leaves of Camellia sinensis, has long been consumed worldwide for its unique taste and aroma. Terpenoids play important roles not only in tea beverage aroma formation, but also in the productivity and quality of tea plantation due to their significant contribution to light harvesting pigments and phytohormones. To date, however, the regulation of terpenoid synthase genes remains unclear. Herein, the analyses of metabolomics, sRNAs, degradome, and transcriptomics were performed and integrated for identifying key regulatory miRNA-target circuits on terpenoid biosynthesis in leaf tissues over five different months in which the amount of terpenoids in tea leaves varies greatly. Four classes of miRNA-TF pairs that might play a central role in the regulation of terpenoid biosynthesis were also uncovered. Ultimately, a hypothetical model was proposed that mature miRNAs maintained by light regulator at both the transcriptional and posttranscriptional levels negatively regulate the targets to control terpenoid biosynthesis.</description><subject>Alkyl and Aryl Transferases - genetics</subject><subject>Alkyl and Aryl Transferases - metabolism</subject><subject>Camellia sinensis - chemistry</subject><subject>Camellia sinensis - genetics</subject><subject>Camellia sinensis - growth & development</subject><subject>Camellia sinensis - metabolism</subject><subject>Gene Expression Regulation, Plant</subject><subject>MicroRNAs - genetics</subject><subject>MicroRNAs - metabolism</subject><subject>Plant Leaves - chemistry</subject><subject>Plant Leaves - genetics</subject><subject>Plant Leaves - growth & development</subject><subject>Plant Leaves - metabolism</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Terpenes - metabolism</subject><subject>Time Factors</subject><issn>0021-8561</issn><issn>1520-5118</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kE1vEzEQhi0EomnLvSfkIwc2jL-6m2MJNK1UShWF88rrHbcuu3awd1PlF_Rv12kCN06WRs_7juch5IzBlAFnX7RJ00dtzbRqQAmp3pAJUxwKxVj1lkwgM0WlztkROU7pEQAqVcJ7ciRAApSST8jzEjeoO-fvabD0hzMxLG8v6LXfhG6DLV3i_djpIcQtXaBHeovDU4i_Ew2erjCu0QfX0q8upK0fHjC5RJ2nc91j1zlNk_PoD8NvzlqM6Ae6iOFpt3HleqR3wfkhnZJ3VncJPxzeE_Lr8vtqflXc_Fxczy9uCi2BDwWHRgIzQopSibbUlZUgy8YI3piZ5ibfJFSrdSOEsWbWAC8by2eV1ihled6KE_Jp37uO4c-Iaah7l0z-rPYYxlRzJqACXnGVUdij2UlKEW29jq7XcVszqHf666y_3umvD_pz5OOhfWx6bP8F_vrOwOc98BoNY_T52P_3vQAXwZLF</recordid><startdate>20181128</startdate><enddate>20181128</enddate><creator>Zhao, Shiqi</creator><creator>Wang, Xuewen</creator><creator>Yan, Xiaomei</creator><creator>Guo, Lingxiao</creator><creator>Mi, Xiaozeng</creator><creator>Xu, Qingshan</creator><creator>Zhu, Junyan</creator><creator>Wu, Ailin</creator><creator>Liu, Linlin</creator><creator>Wei, Chaoling</creator><general>American Chemical Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0003-1300-2016</orcidid></search><sort><creationdate>20181128</creationdate><title>Revealing of MicroRNA Involved Regulatory Gene Networks on Terpenoid Biosynthesis in Camellia sinensis in Different Growing Time Points</title><author>Zhao, Shiqi ; Wang, Xuewen ; Yan, Xiaomei ; Guo, Lingxiao ; Mi, Xiaozeng ; Xu, Qingshan ; Zhu, Junyan ; Wu, Ailin ; Liu, Linlin ; Wei, Chaoling</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a402t-20b401c343753d7a8f4047bc32bc9a2c74235daab33cfc9b027bf298aae4476d3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Alkyl and Aryl Transferases - genetics</topic><topic>Alkyl and Aryl Transferases - metabolism</topic><topic>Camellia sinensis - chemistry</topic><topic>Camellia sinensis - genetics</topic><topic>Camellia sinensis - growth & development</topic><topic>Camellia sinensis - metabolism</topic><topic>Gene Expression Regulation, Plant</topic><topic>MicroRNAs - genetics</topic><topic>MicroRNAs - metabolism</topic><topic>Plant Leaves - chemistry</topic><topic>Plant Leaves - genetics</topic><topic>Plant Leaves - growth & development</topic><topic>Plant Leaves - metabolism</topic><topic>Plant Proteins - genetics</topic><topic>Plant Proteins - metabolism</topic><topic>Terpenes - metabolism</topic><topic>Time Factors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Zhao, Shiqi</creatorcontrib><creatorcontrib>Wang, Xuewen</creatorcontrib><creatorcontrib>Yan, Xiaomei</creatorcontrib><creatorcontrib>Guo, Lingxiao</creatorcontrib><creatorcontrib>Mi, Xiaozeng</creatorcontrib><creatorcontrib>Xu, Qingshan</creatorcontrib><creatorcontrib>Zhu, Junyan</creatorcontrib><creatorcontrib>Wu, Ailin</creatorcontrib><creatorcontrib>Liu, Linlin</creatorcontrib><creatorcontrib>Wei, Chaoling</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of agricultural and food chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Zhao, Shiqi</au><au>Wang, Xuewen</au><au>Yan, Xiaomei</au><au>Guo, Lingxiao</au><au>Mi, Xiaozeng</au><au>Xu, Qingshan</au><au>Zhu, Junyan</au><au>Wu, Ailin</au><au>Liu, Linlin</au><au>Wei, Chaoling</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Revealing of MicroRNA Involved Regulatory Gene Networks on Terpenoid Biosynthesis in Camellia sinensis in Different Growing Time Points</atitle><jtitle>Journal of agricultural and food chemistry</jtitle><addtitle>J. Agric. Food Chem</addtitle><date>2018-11-28</date><risdate>2018</risdate><volume>66</volume><issue>47</issue><spage>12604</spage><epage>12616</epage><pages>12604-12616</pages><issn>0021-8561</issn><eissn>1520-5118</eissn><abstract>Tea, made from leaves of Camellia sinensis, has long been consumed worldwide for its unique taste and aroma. Terpenoids play important roles not only in tea beverage aroma formation, but also in the productivity and quality of tea plantation due to their significant contribution to light harvesting pigments and phytohormones. To date, however, the regulation of terpenoid synthase genes remains unclear. Herein, the analyses of metabolomics, sRNAs, degradome, and transcriptomics were performed and integrated for identifying key regulatory miRNA-target circuits on terpenoid biosynthesis in leaf tissues over five different months in which the amount of terpenoids in tea leaves varies greatly. 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| subjects | Alkyl and Aryl Transferases - genetics Alkyl and Aryl Transferases - metabolism Camellia sinensis - chemistry Camellia sinensis - genetics Camellia sinensis - growth & development Camellia sinensis - metabolism Gene Expression Regulation, Plant MicroRNAs - genetics MicroRNAs - metabolism Plant Leaves - chemistry Plant Leaves - genetics Plant Leaves - growth & development Plant Leaves - metabolism Plant Proteins - genetics Plant Proteins - metabolism Terpenes - metabolism Time Factors |
| title | Revealing of MicroRNA Involved Regulatory Gene Networks on Terpenoid Biosynthesis in Camellia sinensis in Different Growing Time Points |
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