Validation of Numerical Simulations of Thoracic Aorta Hemodynamics: Comparison with In Vivo Measurements and Stochastic Sensitivity Analysis

Purpose Computational fluid dynamics (CFD) and 4D-flow magnetic resonance imaging (MRI) are synergically used for the simulation and the analysis of the flow in a patient-specific geometry of a healthy thoracic aorta. Methods CFD simulations are carried out through the open-source code SimVascular ....

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Veröffentlicht in:Cardiovascular engineering and technology 2018-12, Vol.9 (4), p.688-706
Hauptverfasser: Boccadifuoco, Alessandro, Mariotti, Alessandro, Capellini, Katia, Celi, Simona, Salvetti, Maria Vittoria
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container_issue 4
container_start_page 688
container_title Cardiovascular engineering and technology
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creator Boccadifuoco, Alessandro
Mariotti, Alessandro
Capellini, Katia
Celi, Simona
Salvetti, Maria Vittoria
description Purpose Computational fluid dynamics (CFD) and 4D-flow magnetic resonance imaging (MRI) are synergically used for the simulation and the analysis of the flow in a patient-specific geometry of a healthy thoracic aorta. Methods CFD simulations are carried out through the open-source code SimVascular . The MRI data are used, first, to provide patient-specific boundary conditions. In particular, the experimentally acquired flow rate waveform is imposed at the inlet, while at the outlets the RCR parameters of the Windkessel model are tuned in order to match the experimentally measured fractions of flow rate exiting each domain outlet during an entire cardiac cycle. Then, the MRI data are used to validate the results of the hemodynamic simulations. As expected, with a rigid-wall model the computed flow rate waveforms at the outlets do not show the time lag respect to the inlet waveform conversely found in MRI data. We therefore evaluate the effect of wall compliance by using a linear elastic model with homogeneous and isotropic properties and changing the value of the Young’s modulus. A stochastic analysis based on the polynomial chaos approach is adopted, which allows continuous response surfaces to be obtained in the parameter space starting from a few deterministic simulations. Results The flow rate waveform can be accurately reproduced by the compliant simulations in the ascending aorta; on the other hand, in the aortic arch and in the descending aorta, the experimental time delay can be matched with low values of the Young’s modulus, close to the average value estimated from experiments. However, by decreasing the Young’s modulus the underestimation of the peak flow rate becomes more significant. As for the velocity maps, we found a generally good qualitative agreement of simulations with MRI data. The main difference is that the simulations overestimate the extent of reverse flow regions or predict reverse flow when it is absent in the experimental data. Finally, a significant sensitivity to wall compliance of instantaneous shear stresses during large part of the cardiac cycle period is observed; the variability of the time-averaged wall shear stresses remains however very low. Conclusions In summary, a successful integration of hemodynamic simulations and of MRI data for a patient-specific simulation has been shown. The wall compliance seems to have a significant impact on the numerical predictions; a larger wall elasticity generally improves the agreemen
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Methods CFD simulations are carried out through the open-source code SimVascular . The MRI data are used, first, to provide patient-specific boundary conditions. In particular, the experimentally acquired flow rate waveform is imposed at the inlet, while at the outlets the RCR parameters of the Windkessel model are tuned in order to match the experimentally measured fractions of flow rate exiting each domain outlet during an entire cardiac cycle. Then, the MRI data are used to validate the results of the hemodynamic simulations. As expected, with a rigid-wall model the computed flow rate waveforms at the outlets do not show the time lag respect to the inlet waveform conversely found in MRI data. We therefore evaluate the effect of wall compliance by using a linear elastic model with homogeneous and isotropic properties and changing the value of the Young’s modulus. A stochastic analysis based on the polynomial chaos approach is adopted, which allows continuous response surfaces to be obtained in the parameter space starting from a few deterministic simulations. Results The flow rate waveform can be accurately reproduced by the compliant simulations in the ascending aorta; on the other hand, in the aortic arch and in the descending aorta, the experimental time delay can be matched with low values of the Young’s modulus, close to the average value estimated from experiments. However, by decreasing the Young’s modulus the underestimation of the peak flow rate becomes more significant. As for the velocity maps, we found a generally good qualitative agreement of simulations with MRI data. The main difference is that the simulations overestimate the extent of reverse flow regions or predict reverse flow when it is absent in the experimental data. Finally, a significant sensitivity to wall compliance of instantaneous shear stresses during large part of the cardiac cycle period is observed; the variability of the time-averaged wall shear stresses remains however very low. Conclusions In summary, a successful integration of hemodynamic simulations and of MRI data for a patient-specific simulation has been shown. The wall compliance seems to have a significant impact on the numerical predictions; a larger wall elasticity generally improves the agreement with experimental data.</description><identifier>ISSN: 1869-408X</identifier><identifier>EISSN: 1869-4098</identifier><identifier>DOI: 10.1007/s13239-018-00387-x</identifier><identifier>PMID: 30357714</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Aorta ; Aorta, Thoracic - diagnostic imaging ; Aorta, Thoracic - physiology ; Biomedical Engineering and Bioengineering ; Biomedicine ; Blood Flow Velocity ; Boundary conditions ; Cardiology ; Compliance ; Computational fluid dynamics ; Computer simulation ; Coronary vessels ; Elastic Modulus ; Engineering ; Flow velocity ; Hemodynamics ; Humans ; Image Interpretation, Computer-Assisted ; Magnetic Resonance Angiography - methods ; Magnetic resonance imaging ; Mathematical models ; Models, Cardiovascular ; Modulus of elasticity ; NMR ; Nuclear magnetic resonance ; Numerical Analysis, Computer-Assisted ; Outlets ; Parameters ; Patient-Specific Modeling ; Polynomials ; Predictive Value of Tests ; Qualitative analysis ; Regional Blood Flow ; Reproducibility of Results ; Response surface methodology ; Response time ; Sensitivity analysis ; Shear stress ; Simulation ; Source code ; Stochastic Processes ; Time lag ; Vascular Stiffness ; Wall shear stresses ; Waveforms</subject><ispartof>Cardiovascular engineering and technology, 2018-12, Vol.9 (4), p.688-706</ispartof><rights>Biomedical Engineering Society 2018</rights><rights>Copyright Springer Science &amp; Business Media 2018</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c375t-e22077cfb62f9f325b701dcc138e82578e5fa71f63c52476639f93b27800e333</citedby><cites>FETCH-LOGICAL-c375t-e22077cfb62f9f325b701dcc138e82578e5fa71f63c52476639f93b27800e333</cites><orcidid>0000-0002-0082-7740</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s13239-018-00387-x$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s13239-018-00387-x$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30357714$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Boccadifuoco, Alessandro</creatorcontrib><creatorcontrib>Mariotti, Alessandro</creatorcontrib><creatorcontrib>Capellini, Katia</creatorcontrib><creatorcontrib>Celi, Simona</creatorcontrib><creatorcontrib>Salvetti, Maria Vittoria</creatorcontrib><title>Validation of Numerical Simulations of Thoracic Aorta Hemodynamics: Comparison with In Vivo Measurements and Stochastic Sensitivity Analysis</title><title>Cardiovascular engineering and technology</title><addtitle>Cardiovasc Eng Tech</addtitle><addtitle>Cardiovasc Eng Technol</addtitle><description>Purpose Computational fluid dynamics (CFD) and 4D-flow magnetic resonance imaging (MRI) are synergically used for the simulation and the analysis of the flow in a patient-specific geometry of a healthy thoracic aorta. Methods CFD simulations are carried out through the open-source code SimVascular . The MRI data are used, first, to provide patient-specific boundary conditions. In particular, the experimentally acquired flow rate waveform is imposed at the inlet, while at the outlets the RCR parameters of the Windkessel model are tuned in order to match the experimentally measured fractions of flow rate exiting each domain outlet during an entire cardiac cycle. Then, the MRI data are used to validate the results of the hemodynamic simulations. As expected, with a rigid-wall model the computed flow rate waveforms at the outlets do not show the time lag respect to the inlet waveform conversely found in MRI data. We therefore evaluate the effect of wall compliance by using a linear elastic model with homogeneous and isotropic properties and changing the value of the Young’s modulus. A stochastic analysis based on the polynomial chaos approach is adopted, which allows continuous response surfaces to be obtained in the parameter space starting from a few deterministic simulations. Results The flow rate waveform can be accurately reproduced by the compliant simulations in the ascending aorta; on the other hand, in the aortic arch and in the descending aorta, the experimental time delay can be matched with low values of the Young’s modulus, close to the average value estimated from experiments. However, by decreasing the Young’s modulus the underestimation of the peak flow rate becomes more significant. As for the velocity maps, we found a generally good qualitative agreement of simulations with MRI data. The main difference is that the simulations overestimate the extent of reverse flow regions or predict reverse flow when it is absent in the experimental data. Finally, a significant sensitivity to wall compliance of instantaneous shear stresses during large part of the cardiac cycle period is observed; the variability of the time-averaged wall shear stresses remains however very low. Conclusions In summary, a successful integration of hemodynamic simulations and of MRI data for a patient-specific simulation has been shown. The wall compliance seems to have a significant impact on the numerical predictions; a larger wall elasticity generally improves the agreement with experimental data.</description><subject>Aorta</subject><subject>Aorta, Thoracic - diagnostic imaging</subject><subject>Aorta, Thoracic - physiology</subject><subject>Biomedical Engineering and Bioengineering</subject><subject>Biomedicine</subject><subject>Blood Flow Velocity</subject><subject>Boundary conditions</subject><subject>Cardiology</subject><subject>Compliance</subject><subject>Computational fluid dynamics</subject><subject>Computer simulation</subject><subject>Coronary vessels</subject><subject>Elastic Modulus</subject><subject>Engineering</subject><subject>Flow velocity</subject><subject>Hemodynamics</subject><subject>Humans</subject><subject>Image Interpretation, Computer-Assisted</subject><subject>Magnetic Resonance Angiography - methods</subject><subject>Magnetic resonance imaging</subject><subject>Mathematical models</subject><subject>Models, Cardiovascular</subject><subject>Modulus of elasticity</subject><subject>NMR</subject><subject>Nuclear magnetic resonance</subject><subject>Numerical Analysis, Computer-Assisted</subject><subject>Outlets</subject><subject>Parameters</subject><subject>Patient-Specific Modeling</subject><subject>Polynomials</subject><subject>Predictive Value of Tests</subject><subject>Qualitative analysis</subject><subject>Regional Blood Flow</subject><subject>Reproducibility of Results</subject><subject>Response surface methodology</subject><subject>Response time</subject><subject>Sensitivity analysis</subject><subject>Shear stress</subject><subject>Simulation</subject><subject>Source code</subject><subject>Stochastic Processes</subject><subject>Time lag</subject><subject>Vascular Stiffness</subject><subject>Wall shear stresses</subject><subject>Waveforms</subject><issn>1869-408X</issn><issn>1869-4098</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kc1uGyEURlHVqIncvEAXFVI33UzLzzBAd5bVNpHSZmEr6m6EGaYmGgaXy6TxO-Shg-M0lbIIGxD33O8iDkLvKPlECZGfgXLGdUWoqgjhSla3r9AJVY2uaqLV66ez-nWMTgGuSVmcaVKzN-iYEy6kpPUJursyg-9M9nHEscc_p-CSt2bASx-m4eEe9oXVJiZjvcXzmLLBZy7Ebjea4C18wYsYtiZ5KBl_fd7g8xFf-ZuIfzgDU3LBjRmwGTu8zNFuDOSSs3Qj-OxvfN7h-WiGHXh4i456M4A7fdxnaPXt62pxVl1cfj9fzC8qy6XIlWOMSGn7dcN63XMm1pLQzlrKlVNMSOVEbyTtG24Fq2XTcN1rvmZSEeI45zP08RC7TfHP5CC3wYN1w2BGFydoGWWC6VqVX5qhD8_Q6zil8tw9JYjQdS1podiBsikCJNe32-SDSbuWknZvqz3Yaout9sFWe1ua3j9GT-vguqeWf24KwA8AlNL426X_s1-IvQfsNaF7</recordid><startdate>20181201</startdate><enddate>20181201</enddate><creator>Boccadifuoco, Alessandro</creator><creator>Mariotti, Alessandro</creator><creator>Capellini, Katia</creator><creator>Celi, Simona</creator><creator>Salvetti, Maria Vittoria</creator><general>Springer US</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-0082-7740</orcidid></search><sort><creationdate>20181201</creationdate><title>Validation of Numerical Simulations of Thoracic Aorta Hemodynamics: Comparison with In Vivo Measurements and Stochastic Sensitivity Analysis</title><author>Boccadifuoco, Alessandro ; Mariotti, Alessandro ; Capellini, Katia ; Celi, Simona ; Salvetti, Maria Vittoria</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c375t-e22077cfb62f9f325b701dcc138e82578e5fa71f63c52476639f93b27800e333</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Aorta</topic><topic>Aorta, Thoracic - diagnostic imaging</topic><topic>Aorta, Thoracic - physiology</topic><topic>Biomedical Engineering and Bioengineering</topic><topic>Biomedicine</topic><topic>Blood Flow Velocity</topic><topic>Boundary conditions</topic><topic>Cardiology</topic><topic>Compliance</topic><topic>Computational fluid dynamics</topic><topic>Computer simulation</topic><topic>Coronary vessels</topic><topic>Elastic Modulus</topic><topic>Engineering</topic><topic>Flow velocity</topic><topic>Hemodynamics</topic><topic>Humans</topic><topic>Image Interpretation, Computer-Assisted</topic><topic>Magnetic Resonance Angiography - methods</topic><topic>Magnetic resonance imaging</topic><topic>Mathematical models</topic><topic>Models, Cardiovascular</topic><topic>Modulus of elasticity</topic><topic>NMR</topic><topic>Nuclear magnetic resonance</topic><topic>Numerical Analysis, Computer-Assisted</topic><topic>Outlets</topic><topic>Parameters</topic><topic>Patient-Specific Modeling</topic><topic>Polynomials</topic><topic>Predictive Value of Tests</topic><topic>Qualitative analysis</topic><topic>Regional Blood Flow</topic><topic>Reproducibility of Results</topic><topic>Response surface methodology</topic><topic>Response time</topic><topic>Sensitivity analysis</topic><topic>Shear stress</topic><topic>Simulation</topic><topic>Source code</topic><topic>Stochastic Processes</topic><topic>Time lag</topic><topic>Vascular Stiffness</topic><topic>Wall shear stresses</topic><topic>Waveforms</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Boccadifuoco, Alessandro</creatorcontrib><creatorcontrib>Mariotti, Alessandro</creatorcontrib><creatorcontrib>Capellini, Katia</creatorcontrib><creatorcontrib>Celi, Simona</creatorcontrib><creatorcontrib>Salvetti, Maria Vittoria</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Cardiovascular engineering and technology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Boccadifuoco, Alessandro</au><au>Mariotti, Alessandro</au><au>Capellini, Katia</au><au>Celi, Simona</au><au>Salvetti, Maria Vittoria</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Validation of Numerical Simulations of Thoracic Aorta Hemodynamics: Comparison with In Vivo Measurements and Stochastic Sensitivity Analysis</atitle><jtitle>Cardiovascular engineering and technology</jtitle><stitle>Cardiovasc Eng Tech</stitle><addtitle>Cardiovasc Eng Technol</addtitle><date>2018-12-01</date><risdate>2018</risdate><volume>9</volume><issue>4</issue><spage>688</spage><epage>706</epage><pages>688-706</pages><issn>1869-408X</issn><eissn>1869-4098</eissn><abstract>Purpose Computational fluid dynamics (CFD) and 4D-flow magnetic resonance imaging (MRI) are synergically used for the simulation and the analysis of the flow in a patient-specific geometry of a healthy thoracic aorta. Methods CFD simulations are carried out through the open-source code SimVascular . The MRI data are used, first, to provide patient-specific boundary conditions. In particular, the experimentally acquired flow rate waveform is imposed at the inlet, while at the outlets the RCR parameters of the Windkessel model are tuned in order to match the experimentally measured fractions of flow rate exiting each domain outlet during an entire cardiac cycle. Then, the MRI data are used to validate the results of the hemodynamic simulations. As expected, with a rigid-wall model the computed flow rate waveforms at the outlets do not show the time lag respect to the inlet waveform conversely found in MRI data. We therefore evaluate the effect of wall compliance by using a linear elastic model with homogeneous and isotropic properties and changing the value of the Young’s modulus. A stochastic analysis based on the polynomial chaos approach is adopted, which allows continuous response surfaces to be obtained in the parameter space starting from a few deterministic simulations. Results The flow rate waveform can be accurately reproduced by the compliant simulations in the ascending aorta; on the other hand, in the aortic arch and in the descending aorta, the experimental time delay can be matched with low values of the Young’s modulus, close to the average value estimated from experiments. However, by decreasing the Young’s modulus the underestimation of the peak flow rate becomes more significant. As for the velocity maps, we found a generally good qualitative agreement of simulations with MRI data. The main difference is that the simulations overestimate the extent of reverse flow regions or predict reverse flow when it is absent in the experimental data. Finally, a significant sensitivity to wall compliance of instantaneous shear stresses during large part of the cardiac cycle period is observed; the variability of the time-averaged wall shear stresses remains however very low. Conclusions In summary, a successful integration of hemodynamic simulations and of MRI data for a patient-specific simulation has been shown. The wall compliance seems to have a significant impact on the numerical predictions; a larger wall elasticity generally improves the agreement with experimental data.</abstract><cop>New York</cop><pub>Springer US</pub><pmid>30357714</pmid><doi>10.1007/s13239-018-00387-x</doi><tpages>19</tpages><orcidid>https://orcid.org/0000-0002-0082-7740</orcidid></addata></record>
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subjects Aorta
Aorta, Thoracic - diagnostic imaging
Aorta, Thoracic - physiology
Biomedical Engineering and Bioengineering
Biomedicine
Blood Flow Velocity
Boundary conditions
Cardiology
Compliance
Computational fluid dynamics
Computer simulation
Coronary vessels
Elastic Modulus
Engineering
Flow velocity
Hemodynamics
Humans
Image Interpretation, Computer-Assisted
Magnetic Resonance Angiography - methods
Magnetic resonance imaging
Mathematical models
Models, Cardiovascular
Modulus of elasticity
NMR
Nuclear magnetic resonance
Numerical Analysis, Computer-Assisted
Outlets
Parameters
Patient-Specific Modeling
Polynomials
Predictive Value of Tests
Qualitative analysis
Regional Blood Flow
Reproducibility of Results
Response surface methodology
Response time
Sensitivity analysis
Shear stress
Simulation
Source code
Stochastic Processes
Time lag
Vascular Stiffness
Wall shear stresses
Waveforms
title Validation of Numerical Simulations of Thoracic Aorta Hemodynamics: Comparison with In Vivo Measurements and Stochastic Sensitivity Analysis
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