The Conserved Active Site Proline Determines the Reducing Power of Staphylococcus aureus Thioredoxin
Nature uses thioredoxin-like folds in several disulfide bond oxidoreductases. Each of them has a typical active site Cys-X-X-Cys sequence motif, the hallmark of thioredoxin being Trp-Cys-Gly-Pro-Cys. The intriguing role of the highly conserved proline in the ubiquitous reducing agent thioredoxin was...
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Veröffentlicht in: | Journal of molecular biology 2007-05, Vol.368 (3), p.800-811 |
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description | Nature uses thioredoxin-like folds in several disulfide bond oxidoreductases. Each of them has a typical active site Cys-X-X-Cys sequence motif, the hallmark of thioredoxin being Trp-Cys-Gly-Pro-Cys. The intriguing role of the highly conserved proline in the ubiquitous reducing agent thioredoxin was studied by site-specific mutagenesis of Staphylococcus aureus thioredoxin (Sa_Trx). We present X-ray structures, redox potential, pKa, steady-state kinetic parameters, and thermodynamic stabilities. By replacing the central proline to a threonine/serine, no extra hydrogen bonds with the sulphur of the nucleophilic cysteine are introduced. The only structural difference is that the immediate chemical surrounding of the nucleophilic cysteine becomes more hydrophilic. The pKa value of the nucleophilic cysteine decreases with approximately one pH unit and its redox potential increases with 30 mV. Thioredoxin becomes more oxidizing and the efficiency to catalyse substrate reduction (kcat/KM) decreases sevenfold relative to wild-type Sa_Trx. The oxidized form of wild-type Sa_Trx is far more stable than the reduced form over the whole temperature range. The driving force to reduce substrate proteins is the relative stability of the oxidized versus the reduced form Δ(T1/2)ox/red. This driving force is decreased in the Sa_Trx P31T mutant. Δ(T1/2)ox/red drops from 15.5 °C (wild-type) to 5.8 °C (P31T mutant). In conclusion, the active site proline in thioredoxin determines the driving potential for substrate reduction. |
doi_str_mv | 10.1016/j.jmb.2007.02.045 |
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Each of them has a typical active site Cys-X-X-Cys sequence motif, the hallmark of thioredoxin being Trp-Cys-Gly-Pro-Cys. The intriguing role of the highly conserved proline in the ubiquitous reducing agent thioredoxin was studied by site-specific mutagenesis of Staphylococcus aureus thioredoxin (Sa_Trx). We present X-ray structures, redox potential, pKa, steady-state kinetic parameters, and thermodynamic stabilities. By replacing the central proline to a threonine/serine, no extra hydrogen bonds with the sulphur of the nucleophilic cysteine are introduced. The only structural difference is that the immediate chemical surrounding of the nucleophilic cysteine becomes more hydrophilic. The pKa value of the nucleophilic cysteine decreases with approximately one pH unit and its redox potential increases with 30 mV. Thioredoxin becomes more oxidizing and the efficiency to catalyse substrate reduction (kcat/KM) decreases sevenfold relative to wild-type Sa_Trx. The oxidized form of wild-type Sa_Trx is far more stable than the reduced form over the whole temperature range. The driving force to reduce substrate proteins is the relative stability of the oxidized versus the reduced form Δ(T1/2)ox/red. This driving force is decreased in the Sa_Trx P31T mutant. Δ(T1/2)ox/red drops from 15.5 °C (wild-type) to 5.8 °C (P31T mutant). In conclusion, the active site proline in thioredoxin determines the driving potential for substrate reduction.</description><identifier>ISSN: 0022-2836</identifier><identifier>EISSN: 1089-8638</identifier><identifier>DOI: 10.1016/j.jmb.2007.02.045</identifier><identifier>PMID: 17368484</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>Amino Acid Sequence ; Binding Sites ; Conserved Sequence ; Crystallography, X-Ray ; Cysteine - chemistry ; Hydrogen Bonding ; kinetics ; Models, Molecular ; Molecular Sequence Data ; Mutagenesis, Site-Directed ; Mutation ; Oxidation-Reduction ; pKa ; Proline - chemistry ; Protein Folding ; redox potential ; stability ; Staphylococcus aureus ; Staphylococcus aureus - chemistry ; structure ; Thermodynamics ; Thioredoxins - chemistry ; Thioredoxins - genetics</subject><ispartof>Journal of molecular biology, 2007-05, Vol.368 (3), p.800-811</ispartof><rights>2007 Elsevier Ltd</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c448t-ded2661917405256671415d074c82c25008f8b7a086ea2c45ca93090aaa833a73</citedby><cites>FETCH-LOGICAL-c448t-ded2661917405256671415d074c82c25008f8b7a086ea2c45ca93090aaa833a73</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.jmb.2007.02.045$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>315,782,786,3554,27933,27934,46004</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/17368484$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Roos, Goedele</creatorcontrib><creatorcontrib>Garcia-Pino, Abel</creatorcontrib><creatorcontrib>Van belle, Karolien</creatorcontrib><creatorcontrib>Brosens, Elke</creatorcontrib><creatorcontrib>Wahni, Khadija</creatorcontrib><creatorcontrib>Vandenbussche, Guy</creatorcontrib><creatorcontrib>Wyns, Lode</creatorcontrib><creatorcontrib>Loris, Remy</creatorcontrib><creatorcontrib>Messens, Joris</creatorcontrib><title>The Conserved Active Site Proline Determines the Reducing Power of Staphylococcus aureus Thioredoxin</title><title>Journal of molecular biology</title><addtitle>J Mol Biol</addtitle><description>Nature uses thioredoxin-like folds in several disulfide bond oxidoreductases. Each of them has a typical active site Cys-X-X-Cys sequence motif, the hallmark of thioredoxin being Trp-Cys-Gly-Pro-Cys. The intriguing role of the highly conserved proline in the ubiquitous reducing agent thioredoxin was studied by site-specific mutagenesis of Staphylococcus aureus thioredoxin (Sa_Trx). We present X-ray structures, redox potential, pKa, steady-state kinetic parameters, and thermodynamic stabilities. By replacing the central proline to a threonine/serine, no extra hydrogen bonds with the sulphur of the nucleophilic cysteine are introduced. The only structural difference is that the immediate chemical surrounding of the nucleophilic cysteine becomes more hydrophilic. The pKa value of the nucleophilic cysteine decreases with approximately one pH unit and its redox potential increases with 30 mV. Thioredoxin becomes more oxidizing and the efficiency to catalyse substrate reduction (kcat/KM) decreases sevenfold relative to wild-type Sa_Trx. The oxidized form of wild-type Sa_Trx is far more stable than the reduced form over the whole temperature range. The driving force to reduce substrate proteins is the relative stability of the oxidized versus the reduced form Δ(T1/2)ox/red. This driving force is decreased in the Sa_Trx P31T mutant. Δ(T1/2)ox/red drops from 15.5 °C (wild-type) to 5.8 °C (P31T mutant). In conclusion, the active site proline in thioredoxin determines the driving potential for substrate reduction.</description><subject>Amino Acid Sequence</subject><subject>Binding Sites</subject><subject>Conserved Sequence</subject><subject>Crystallography, X-Ray</subject><subject>Cysteine - chemistry</subject><subject>Hydrogen Bonding</subject><subject>kinetics</subject><subject>Models, Molecular</subject><subject>Molecular Sequence Data</subject><subject>Mutagenesis, Site-Directed</subject><subject>Mutation</subject><subject>Oxidation-Reduction</subject><subject>pKa</subject><subject>Proline - chemistry</subject><subject>Protein Folding</subject><subject>redox potential</subject><subject>stability</subject><subject>Staphylococcus aureus</subject><subject>Staphylococcus aureus - chemistry</subject><subject>structure</subject><subject>Thermodynamics</subject><subject>Thioredoxins - chemistry</subject><subject>Thioredoxins - genetics</subject><issn>0022-2836</issn><issn>1089-8638</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kE1P4zAURS3ECArMD5gN8opdMs-O47hihcrXSEiDoLO2XPt16iqJi50U-PcYtRI7Vvctzr3SO4T8YlAyYPL3ulx3i5IDNCXwEkR9QCYM1LRQslKHZALAecFVJY_JSUprAKgroY7IMWsqqYQSE-LmK6Sz0CeMW3T0yg5-i_TZD0gfY2h9j_QaB4xdvhIdMvyEbrS-_08fwytGGpb0eTCb1XsbbLB2TNSMEXPMVz5EdOHN92fkx9K0CX_u85T8u72Zz-6Lh793f2ZXD4UVQg2FQ8elZFPWCKh5LWXDBKsdNMIqbnkNoJZq0RhQEg23orZmWsEUjDGqqkxTnZKL3e4mhpcR06A7nyy2rekxjElzBhJq4BlkO9DGkFLEpd5E35n4rhnoT7V6rbNa_alWA9dZbe6c78fHRYfuq7F3mYHLHYD5xa3HqJP12Ft0PqIdtAv-m_kP7xmJSw</recordid><startdate>20070504</startdate><enddate>20070504</enddate><creator>Roos, Goedele</creator><creator>Garcia-Pino, Abel</creator><creator>Van belle, Karolien</creator><creator>Brosens, Elke</creator><creator>Wahni, Khadija</creator><creator>Vandenbussche, Guy</creator><creator>Wyns, Lode</creator><creator>Loris, Remy</creator><creator>Messens, Joris</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope></search><sort><creationdate>20070504</creationdate><title>The Conserved Active Site Proline Determines the Reducing Power of Staphylococcus aureus Thioredoxin</title><author>Roos, Goedele ; Garcia-Pino, Abel ; Van belle, Karolien ; Brosens, Elke ; Wahni, Khadija ; Vandenbussche, Guy ; Wyns, Lode ; Loris, Remy ; Messens, Joris</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c448t-ded2661917405256671415d074c82c25008f8b7a086ea2c45ca93090aaa833a73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Amino Acid Sequence</topic><topic>Binding Sites</topic><topic>Conserved Sequence</topic><topic>Crystallography, X-Ray</topic><topic>Cysteine - chemistry</topic><topic>Hydrogen Bonding</topic><topic>kinetics</topic><topic>Models, Molecular</topic><topic>Molecular Sequence Data</topic><topic>Mutagenesis, Site-Directed</topic><topic>Mutation</topic><topic>Oxidation-Reduction</topic><topic>pKa</topic><topic>Proline - chemistry</topic><topic>Protein Folding</topic><topic>redox potential</topic><topic>stability</topic><topic>Staphylococcus aureus</topic><topic>Staphylococcus aureus - chemistry</topic><topic>structure</topic><topic>Thermodynamics</topic><topic>Thioredoxins - chemistry</topic><topic>Thioredoxins - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Roos, Goedele</creatorcontrib><creatorcontrib>Garcia-Pino, Abel</creatorcontrib><creatorcontrib>Van belle, Karolien</creatorcontrib><creatorcontrib>Brosens, Elke</creatorcontrib><creatorcontrib>Wahni, Khadija</creatorcontrib><creatorcontrib>Vandenbussche, Guy</creatorcontrib><creatorcontrib>Wyns, Lode</creatorcontrib><creatorcontrib>Loris, Remy</creatorcontrib><creatorcontrib>Messens, Joris</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><jtitle>Journal of molecular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Roos, Goedele</au><au>Garcia-Pino, Abel</au><au>Van belle, Karolien</au><au>Brosens, Elke</au><au>Wahni, Khadija</au><au>Vandenbussche, Guy</au><au>Wyns, Lode</au><au>Loris, Remy</au><au>Messens, Joris</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The Conserved Active Site Proline Determines the Reducing Power of Staphylococcus aureus Thioredoxin</atitle><jtitle>Journal of molecular biology</jtitle><addtitle>J Mol Biol</addtitle><date>2007-05-04</date><risdate>2007</risdate><volume>368</volume><issue>3</issue><spage>800</spage><epage>811</epage><pages>800-811</pages><issn>0022-2836</issn><eissn>1089-8638</eissn><abstract>Nature uses thioredoxin-like folds in several disulfide bond oxidoreductases. Each of them has a typical active site Cys-X-X-Cys sequence motif, the hallmark of thioredoxin being Trp-Cys-Gly-Pro-Cys. The intriguing role of the highly conserved proline in the ubiquitous reducing agent thioredoxin was studied by site-specific mutagenesis of Staphylococcus aureus thioredoxin (Sa_Trx). We present X-ray structures, redox potential, pKa, steady-state kinetic parameters, and thermodynamic stabilities. By replacing the central proline to a threonine/serine, no extra hydrogen bonds with the sulphur of the nucleophilic cysteine are introduced. The only structural difference is that the immediate chemical surrounding of the nucleophilic cysteine becomes more hydrophilic. The pKa value of the nucleophilic cysteine decreases with approximately one pH unit and its redox potential increases with 30 mV. Thioredoxin becomes more oxidizing and the efficiency to catalyse substrate reduction (kcat/KM) decreases sevenfold relative to wild-type Sa_Trx. The oxidized form of wild-type Sa_Trx is far more stable than the reduced form over the whole temperature range. The driving force to reduce substrate proteins is the relative stability of the oxidized versus the reduced form Δ(T1/2)ox/red. This driving force is decreased in the Sa_Trx P31T mutant. Δ(T1/2)ox/red drops from 15.5 °C (wild-type) to 5.8 °C (P31T mutant). In conclusion, the active site proline in thioredoxin determines the driving potential for substrate reduction.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>17368484</pmid><doi>10.1016/j.jmb.2007.02.045</doi><tpages>12</tpages></addata></record> |
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subjects | Amino Acid Sequence Binding Sites Conserved Sequence Crystallography, X-Ray Cysteine - chemistry Hydrogen Bonding kinetics Models, Molecular Molecular Sequence Data Mutagenesis, Site-Directed Mutation Oxidation-Reduction pKa Proline - chemistry Protein Folding redox potential stability Staphylococcus aureus Staphylococcus aureus - chemistry structure Thermodynamics Thioredoxins - chemistry Thioredoxins - genetics |
title | The Conserved Active Site Proline Determines the Reducing Power of Staphylococcus aureus Thioredoxin |
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