Occurrence of Karenia papilionacea (Dinophyceae) and its novel sister phylotype in Japanese coastal waters
Several species of the genus Karenia (Dinophyceae) form blooms and often cause the mortality of cultured and wild fish. In Japan, blooms caused by two species – namely Karenia mikimotoi and Karenia brevis – have been reported so far. On the basis of morphological and molecular-phylogenic examination...
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creator | Yamaguchi, Haruo Hirano, Takeshi Yoshimatsu, Takamichi Tanimoto, Yuko Matsumoto, Takuya Suzuki, Satoshi Hayashi, Yoshihiro Urabe, Atsushi Miyamura, Kazuyoshi Sakamoto, Setsuko Yamaguchi, Mineo Tomaru, Yuji |
description | Several species of the genus Karenia (Dinophyceae) form blooms and often cause the mortality of cultured and wild fish. In Japan, blooms caused by two species – namely Karenia mikimotoi and Karenia brevis – have been reported so far. On the basis of morphological and molecular-phylogenic examinations, the present investigation found Karenia papilionacea and its novel sister phylotype for the first time in the coastal waters of the various regions of Japan. Of 34 strains isolated from the coastal waters, 27 strains displayed the typical morphological characteristics of K. papilionacea and further showed consensus DNA sequences corresponding to those of the originally described K. papilionacea. The other 7 strains displayed the same morphological characteristics of K. papilionacea, but showed divergent DNA sequences, at a genetic distance of over 0.04 (Internal Transcribed Spacer regions) from those of the original phylotype of K. papilionacea. These divergent strains were characterized as a novel sister phylotype (phylotype-I) of K. papilionacea. In the coastal waters of Japan, K. papilionacea-like (K. papilionacea and/or its phylotype-I) formed blooms at 20.3–30.4°C and salinity 30.1–33.9. No K. brevis was identified in Japanese coastal waters during this study. These findings demonstrated that K. papilionacea occurs along the coasts of western Japan and possibly shares several coastal regions with K. mikimotoi and K. papilionacea phylotype-I. In order to assess the risks of Karenia blooms to aquaculture, it is essential that the growth physiology and ichthyotoxicity of K. papilionacea and its novel phylotype should be characterized. |
doi_str_mv | 10.1016/j.hal.2016.04.007 |
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In Japan, blooms caused by two species – namely Karenia mikimotoi and Karenia brevis – have been reported so far. On the basis of morphological and molecular-phylogenic examinations, the present investigation found Karenia papilionacea and its novel sister phylotype for the first time in the coastal waters of the various regions of Japan. Of 34 strains isolated from the coastal waters, 27 strains displayed the typical morphological characteristics of K. papilionacea and further showed consensus DNA sequences corresponding to those of the originally described K. papilionacea. The other 7 strains displayed the same morphological characteristics of K. papilionacea, but showed divergent DNA sequences, at a genetic distance of over 0.04 (Internal Transcribed Spacer regions) from those of the original phylotype of K. papilionacea. These divergent strains were characterized as a novel sister phylotype (phylotype-I) of K. papilionacea. In the coastal waters of Japan, K. papilionacea-like (K. papilionacea and/or its phylotype-I) formed blooms at 20.3–30.4°C and salinity 30.1–33.9. No K. brevis was identified in Japanese coastal waters during this study. These findings demonstrated that K. papilionacea occurs along the coasts of western Japan and possibly shares several coastal regions with K. mikimotoi and K. papilionacea phylotype-I. In order to assess the risks of Karenia blooms to aquaculture, it is essential that the growth physiology and ichthyotoxicity of K. papilionacea and its novel phylotype should be characterized.</description><identifier>ISSN: 1568-9883</identifier><identifier>EISSN: 1878-1470</identifier><identifier>DOI: 10.1016/j.hal.2016.04.007</identifier><identifier>PMID: 30170722</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Bloom dynamics ; Dinophyceae ; Karenia brevis ; Karenia mikimotoi ; Karenia papilionacea ; Phylogenetic analysis ; Phylotype</subject><ispartof>Harmful algae, 2016-07, Vol.57 (Pt A), p.59-68</ispartof><rights>2016 Elsevier B.V.</rights><rights>Copyright © 2016 Elsevier B.V. All rights reserved.</rights><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c452t-933209784895842fdc62153cd407378fc94d2e834c0767a44504e1a4d8dcbfe53</citedby><cites>FETCH-LOGICAL-c452t-933209784895842fdc62153cd407378fc94d2e834c0767a44504e1a4d8dcbfe53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.hal.2016.04.007$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>315,782,786,3554,27933,27934,46004</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30170722$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Yamaguchi, Haruo</creatorcontrib><creatorcontrib>Hirano, Takeshi</creatorcontrib><creatorcontrib>Yoshimatsu, Takamichi</creatorcontrib><creatorcontrib>Tanimoto, Yuko</creatorcontrib><creatorcontrib>Matsumoto, Takuya</creatorcontrib><creatorcontrib>Suzuki, Satoshi</creatorcontrib><creatorcontrib>Hayashi, Yoshihiro</creatorcontrib><creatorcontrib>Urabe, Atsushi</creatorcontrib><creatorcontrib>Miyamura, Kazuyoshi</creatorcontrib><creatorcontrib>Sakamoto, Setsuko</creatorcontrib><creatorcontrib>Yamaguchi, Mineo</creatorcontrib><creatorcontrib>Tomaru, Yuji</creatorcontrib><title>Occurrence of Karenia papilionacea (Dinophyceae) and its novel sister phylotype in Japanese coastal waters</title><title>Harmful algae</title><addtitle>Harmful Algae</addtitle><description>Several species of the genus Karenia (Dinophyceae) form blooms and often cause the mortality of cultured and wild fish. In Japan, blooms caused by two species – namely Karenia mikimotoi and Karenia brevis – have been reported so far. On the basis of morphological and molecular-phylogenic examinations, the present investigation found Karenia papilionacea and its novel sister phylotype for the first time in the coastal waters of the various regions of Japan. Of 34 strains isolated from the coastal waters, 27 strains displayed the typical morphological characteristics of K. papilionacea and further showed consensus DNA sequences corresponding to those of the originally described K. papilionacea. The other 7 strains displayed the same morphological characteristics of K. papilionacea, but showed divergent DNA sequences, at a genetic distance of over 0.04 (Internal Transcribed Spacer regions) from those of the original phylotype of K. papilionacea. These divergent strains were characterized as a novel sister phylotype (phylotype-I) of K. papilionacea. In the coastal waters of Japan, K. papilionacea-like (K. papilionacea and/or its phylotype-I) formed blooms at 20.3–30.4°C and salinity 30.1–33.9. No K. brevis was identified in Japanese coastal waters during this study. These findings demonstrated that K. papilionacea occurs along the coasts of western Japan and possibly shares several coastal regions with K. mikimotoi and K. papilionacea phylotype-I. In order to assess the risks of Karenia blooms to aquaculture, it is essential that the growth physiology and ichthyotoxicity of K. papilionacea and its novel phylotype should be characterized.</description><subject>Bloom dynamics</subject><subject>Dinophyceae</subject><subject>Karenia brevis</subject><subject>Karenia mikimotoi</subject><subject>Karenia papilionacea</subject><subject>Phylogenetic analysis</subject><subject>Phylotype</subject><issn>1568-9883</issn><issn>1878-1470</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><recordid>eNqFkc1u2zAQhImiQZ2mfYBeCh6Tg5QlRYkUcgqc_iQx4Et6JmhyBdOQRYWUE_jtQ8Nuju1pB9hvB4sZQr4xKBmw5npTrk1f8ixLECWA_EDOmZKqYELCx6zrRhWtUtWMfE5pA8AZAHwiswqYBMn5Odksrd3FiINFGjr6aLL0ho5m9L0Pg7Fo6OWdH8K43meNV9QMjvop0SG8YE-TTxNGmrd9mPYjUj_QBzOaARNSG0yaTE9fTWbSF3LWmT7h19O8IH9-_nia_y4Wy1_389tFYUXNp6KtKg6tVEK1tRK8c7bhrK6sEyArqTrbCsdRVcKCbKQRogaBzAinnF11WFcX5PLoO8bwvMM06a1PFvs-PxV2SWd3JSVjjfovyhTLeQolm4yyI2pjSClip8fotybuNQN9aENvdG5DH9rQIHRuI998P9nvVlt07xd_48_AzRHAnMeLx6iT9YcunI9oJ-2C_4f9G6-Umc8</recordid><startdate>201607</startdate><enddate>201607</enddate><creator>Yamaguchi, Haruo</creator><creator>Hirano, Takeshi</creator><creator>Yoshimatsu, Takamichi</creator><creator>Tanimoto, Yuko</creator><creator>Matsumoto, Takuya</creator><creator>Suzuki, Satoshi</creator><creator>Hayashi, Yoshihiro</creator><creator>Urabe, Atsushi</creator><creator>Miyamura, Kazuyoshi</creator><creator>Sakamoto, Setsuko</creator><creator>Yamaguchi, Mineo</creator><creator>Tomaru, Yuji</creator><general>Elsevier B.V</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TN</scope><scope>7U7</scope><scope>C1K</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope><scope>M7N</scope><scope>7X8</scope></search><sort><creationdate>201607</creationdate><title>Occurrence of Karenia papilionacea (Dinophyceae) and its novel sister phylotype in Japanese coastal waters</title><author>Yamaguchi, Haruo ; Hirano, Takeshi ; Yoshimatsu, Takamichi ; Tanimoto, Yuko ; Matsumoto, Takuya ; Suzuki, Satoshi ; Hayashi, Yoshihiro ; Urabe, Atsushi ; Miyamura, Kazuyoshi ; Sakamoto, Setsuko ; Yamaguchi, Mineo ; Tomaru, Yuji</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c452t-933209784895842fdc62153cd407378fc94d2e834c0767a44504e1a4d8dcbfe53</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Bloom dynamics</topic><topic>Dinophyceae</topic><topic>Karenia brevis</topic><topic>Karenia mikimotoi</topic><topic>Karenia papilionacea</topic><topic>Phylogenetic analysis</topic><topic>Phylotype</topic><toplevel>online_resources</toplevel><creatorcontrib>Yamaguchi, Haruo</creatorcontrib><creatorcontrib>Hirano, Takeshi</creatorcontrib><creatorcontrib>Yoshimatsu, Takamichi</creatorcontrib><creatorcontrib>Tanimoto, Yuko</creatorcontrib><creatorcontrib>Matsumoto, Takuya</creatorcontrib><creatorcontrib>Suzuki, Satoshi</creatorcontrib><creatorcontrib>Hayashi, Yoshihiro</creatorcontrib><creatorcontrib>Urabe, Atsushi</creatorcontrib><creatorcontrib>Miyamura, Kazuyoshi</creatorcontrib><creatorcontrib>Sakamoto, Setsuko</creatorcontrib><creatorcontrib>Yamaguchi, Mineo</creatorcontrib><creatorcontrib>Tomaru, Yuji</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Oceanic Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>MEDLINE - Academic</collection><jtitle>Harmful algae</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Yamaguchi, Haruo</au><au>Hirano, Takeshi</au><au>Yoshimatsu, Takamichi</au><au>Tanimoto, Yuko</au><au>Matsumoto, Takuya</au><au>Suzuki, Satoshi</au><au>Hayashi, Yoshihiro</au><au>Urabe, Atsushi</au><au>Miyamura, Kazuyoshi</au><au>Sakamoto, Setsuko</au><au>Yamaguchi, Mineo</au><au>Tomaru, Yuji</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Occurrence of Karenia papilionacea (Dinophyceae) and its novel sister phylotype in Japanese coastal waters</atitle><jtitle>Harmful algae</jtitle><addtitle>Harmful Algae</addtitle><date>2016-07</date><risdate>2016</risdate><volume>57</volume><issue>Pt A</issue><spage>59</spage><epage>68</epage><pages>59-68</pages><issn>1568-9883</issn><eissn>1878-1470</eissn><abstract>Several species of the genus Karenia (Dinophyceae) form blooms and often cause the mortality of cultured and wild fish. In Japan, blooms caused by two species – namely Karenia mikimotoi and Karenia brevis – have been reported so far. On the basis of morphological and molecular-phylogenic examinations, the present investigation found Karenia papilionacea and its novel sister phylotype for the first time in the coastal waters of the various regions of Japan. Of 34 strains isolated from the coastal waters, 27 strains displayed the typical morphological characteristics of K. papilionacea and further showed consensus DNA sequences corresponding to those of the originally described K. papilionacea. The other 7 strains displayed the same morphological characteristics of K. papilionacea, but showed divergent DNA sequences, at a genetic distance of over 0.04 (Internal Transcribed Spacer regions) from those of the original phylotype of K. papilionacea. These divergent strains were characterized as a novel sister phylotype (phylotype-I) of K. papilionacea. In the coastal waters of Japan, K. papilionacea-like (K. papilionacea and/or its phylotype-I) formed blooms at 20.3–30.4°C and salinity 30.1–33.9. No K. brevis was identified in Japanese coastal waters during this study. These findings demonstrated that K. papilionacea occurs along the coasts of western Japan and possibly shares several coastal regions with K. mikimotoi and K. papilionacea phylotype-I. In order to assess the risks of Karenia blooms to aquaculture, it is essential that the growth physiology and ichthyotoxicity of K. papilionacea and its novel phylotype should be characterized.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>30170722</pmid><doi>10.1016/j.hal.2016.04.007</doi><tpages>10</tpages></addata></record> |
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subjects | Bloom dynamics Dinophyceae Karenia brevis Karenia mikimotoi Karenia papilionacea Phylogenetic analysis Phylotype |
title | Occurrence of Karenia papilionacea (Dinophyceae) and its novel sister phylotype in Japanese coastal waters |
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