Evidence of genetically diverse virulent mating types of Phytophthora capsici from Capsicum annum L
Chili pepper ( Capsicum annum L.) is an important economic crop that is severely destroyed by the filamentous oomycete Phytophthora capsici . Little is known about this pathogen in key chili pepper farms in Punjab province, Pakistan. We investigated the genetic diversity of P. capsici strains using...
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| Veröffentlicht in: | World journal of microbiology & biotechnology 2018-09, Vol.34 (9), p.130-15, Article 130 |
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| creator | Nawaz, Kiran Shahid, Ahmad Ali Bengyella, Louis Subhani, Muhammad Nasir Ali, Muhammad Anwar, Waheed Iftikhar, Sehrish Ali, Shinawar Waseem |
| description | Chili pepper (
Capsicum annum
L.) is an important economic crop that is severely destroyed by the filamentous oomycete
Phytophthora capsici
. Little is known about this pathogen in key chili pepper farms in Punjab province, Pakistan. We investigated the genetic diversity of
P. capsici
strains using standard taxonomic and molecular tools, and characterized their colony growth patterns as well as their disease severity on chili pepper plants under the greenhouse conditions. Phylogenetic analysis based on ribosomal DNA (rDNA), β-tubulin and translation elongation factor 1α loci revealed divergent evolution in the population structure of
P. capsici
isolates. The mean oospore diameter of mating type A1 isolates was greater than that of mating type A2 isolates. We provide first evidence of an uneven distribution of highly virulent mating type A1 and A2 of
P. capsici
that are insensitive to mefenoxam, pyrimorph, dimethomorph, and azoxystrobin fungicides, and represent a risk factor that could ease outpacing the current
P. capsici
management strategies. |
| doi_str_mv | 10.1007/s11274-018-2511-y |
| format | Article |
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Capsicum annum
L.) is an important economic crop that is severely destroyed by the filamentous oomycete
Phytophthora capsici
. Little is known about this pathogen in key chili pepper farms in Punjab province, Pakistan. We investigated the genetic diversity of
P. capsici
strains using standard taxonomic and molecular tools, and characterized their colony growth patterns as well as their disease severity on chili pepper plants under the greenhouse conditions. Phylogenetic analysis based on ribosomal DNA (rDNA), β-tubulin and translation elongation factor 1α loci revealed divergent evolution in the population structure of
P. capsici
isolates. The mean oospore diameter of mating type A1 isolates was greater than that of mating type A2 isolates. We provide first evidence of an uneven distribution of highly virulent mating type A1 and A2 of
P. capsici
that are insensitive to mefenoxam, pyrimorph, dimethomorph, and azoxystrobin fungicides, and represent a risk factor that could ease outpacing the current
P. capsici
management strategies.</description><identifier>ISSN: 0959-3993</identifier><identifier>EISSN: 1573-0972</identifier><identifier>DOI: 10.1007/s11274-018-2511-y</identifier><identifier>PMID: 30101403</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Acrylamides - pharmacology ; Alanine - analogs & derivatives ; Alanine - pharmacology ; Applied Microbiology ; Azoxystrobin ; Biochemistry ; Biological evolution ; Biomedical and Life Sciences ; Biotechnology ; Capsicum ; Capsicum - microbiology ; Cluster Analysis ; Deoxyribonucleic acid ; Divergence ; DNA ; DNA, Ribosomal - genetics ; Drug Resistance ; Elongated structure ; Environmental Engineering/Biotechnology ; Evolution ; Evolution, Molecular ; Farm buildings ; Farms ; Fungicides ; Fungicides, Industrial - pharmacology ; Genes, Mating Type, Fungal - genetics ; Genetic diversity ; Genetic Variation ; Growth patterns ; Life Sciences ; Mating ; Mating types ; Mefenoxam ; Microbiology ; Morpholines - pharmacology ; Original Paper ; Pakistan ; Peptide Chain Elongation, Translational - genetics ; Phenotype ; Phylogeny ; Phytophthora - classification ; Phytophthora - drug effects ; Phytophthora - genetics ; Phytophthora - isolation & purification ; Phytophthora capsici ; Plant Diseases - microbiology ; Plant Roots - parasitology ; Population structure ; Pyrimidines - pharmacology ; Ribosomal DNA ; Risk analysis ; Risk Factors ; Sporangia - cytology ; Strobilurins - pharmacology ; Temperature ; Translation elongation ; Tubulin ; Tubulin - genetics ; Virulence</subject><ispartof>World journal of microbiology & biotechnology, 2018-09, Vol.34 (9), p.130-15, Article 130</ispartof><rights>Springer Nature B.V. 2018</rights><rights>World Journal of Microbiology and Biotechnology is a copyright of Springer, (2018). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c408t-f8985192b9bf3d5f568dc058fd623aa40be7b77a8c02875ed144a9ee1abad0ce3</citedby><cites>FETCH-LOGICAL-c408t-f8985192b9bf3d5f568dc058fd623aa40be7b77a8c02875ed144a9ee1abad0ce3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11274-018-2511-y$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11274-018-2511-y$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30101403$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Nawaz, Kiran</creatorcontrib><creatorcontrib>Shahid, Ahmad Ali</creatorcontrib><creatorcontrib>Bengyella, Louis</creatorcontrib><creatorcontrib>Subhani, Muhammad Nasir</creatorcontrib><creatorcontrib>Ali, Muhammad</creatorcontrib><creatorcontrib>Anwar, Waheed</creatorcontrib><creatorcontrib>Iftikhar, Sehrish</creatorcontrib><creatorcontrib>Ali, Shinawar Waseem</creatorcontrib><title>Evidence of genetically diverse virulent mating types of Phytophthora capsici from Capsicum annum L</title><title>World journal of microbiology & biotechnology</title><addtitle>World J Microbiol Biotechnol</addtitle><addtitle>World J Microbiol Biotechnol</addtitle><description>Chili pepper (
Capsicum annum
L.) is an important economic crop that is severely destroyed by the filamentous oomycete
Phytophthora capsici
. Little is known about this pathogen in key chili pepper farms in Punjab province, Pakistan. We investigated the genetic diversity of
P. capsici
strains using standard taxonomic and molecular tools, and characterized their colony growth patterns as well as their disease severity on chili pepper plants under the greenhouse conditions. Phylogenetic analysis based on ribosomal DNA (rDNA), β-tubulin and translation elongation factor 1α loci revealed divergent evolution in the population structure of
P. capsici
isolates. The mean oospore diameter of mating type A1 isolates was greater than that of mating type A2 isolates. We provide first evidence of an uneven distribution of highly virulent mating type A1 and A2 of
P. capsici
that are insensitive to mefenoxam, pyrimorph, dimethomorph, and azoxystrobin fungicides, and represent a risk factor that could ease outpacing the current
P. capsici
management strategies.</description><subject>Acrylamides - pharmacology</subject><subject>Alanine - analogs & derivatives</subject><subject>Alanine - pharmacology</subject><subject>Applied Microbiology</subject><subject>Azoxystrobin</subject><subject>Biochemistry</subject><subject>Biological evolution</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Capsicum</subject><subject>Capsicum - microbiology</subject><subject>Cluster Analysis</subject><subject>Deoxyribonucleic acid</subject><subject>Divergence</subject><subject>DNA</subject><subject>DNA, Ribosomal - genetics</subject><subject>Drug Resistance</subject><subject>Elongated structure</subject><subject>Environmental Engineering/Biotechnology</subject><subject>Evolution</subject><subject>Evolution, Molecular</subject><subject>Farm buildings</subject><subject>Farms</subject><subject>Fungicides</subject><subject>Fungicides, Industrial - pharmacology</subject><subject>Genes, Mating Type, Fungal - genetics</subject><subject>Genetic diversity</subject><subject>Genetic Variation</subject><subject>Growth patterns</subject><subject>Life Sciences</subject><subject>Mating</subject><subject>Mating types</subject><subject>Mefenoxam</subject><subject>Microbiology</subject><subject>Morpholines - pharmacology</subject><subject>Original Paper</subject><subject>Pakistan</subject><subject>Peptide Chain Elongation, Translational - genetics</subject><subject>Phenotype</subject><subject>Phylogeny</subject><subject>Phytophthora - classification</subject><subject>Phytophthora - drug effects</subject><subject>Phytophthora - genetics</subject><subject>Phytophthora - isolation & purification</subject><subject>Phytophthora capsici</subject><subject>Plant Diseases - microbiology</subject><subject>Plant Roots - parasitology</subject><subject>Population structure</subject><subject>Pyrimidines - pharmacology</subject><subject>Ribosomal DNA</subject><subject>Risk analysis</subject><subject>Risk Factors</subject><subject>Sporangia - cytology</subject><subject>Strobilurins - pharmacology</subject><subject>Temperature</subject><subject>Translation elongation</subject><subject>Tubulin</subject><subject>Tubulin - genetics</subject><subject>Virulence</subject><issn>0959-3993</issn><issn>1573-0972</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1kUFv1DAQhS0EotvCD-CCLE5cAmM7ru0jWhWotFJ7KGfLcSa7rhIn2MlK-fd4uwUkJC7jsfy9NyM_Qt4x-MQA1OfMGFd1BUxXXDJWrS_IhkklKjCKvyQbMNJUwhhxQS5zfgQoKiNekwtROlaD2BB_cwwtRo907OgeI87Bu75faRuOmDLSY0hLj3Gmg5tD3NN5nTCf4PvDOo_TYT6MyVHvphx8oF0aB7p9uiwDdTGWuntDXnWuz_j2-bwiP77ePGy_V7u7b7fbL7vK16DnqtNGS2Z4Y5pOtLKT17r1IHXXXnPhXA0NqkYppz1wrSS2rK6dQWSucS14FFfk49l3SuPPBfNsh5A99r2LOC7ZctDKGMWYLOiHf9DHcUmxbGc551CrskiB2Bnyacw5YWenFAaXVsvAngKw5wBsCcCeArBr0bx_Nl6aAds_it8_XgB-BnJ5intMfyf_3_UXRcSSMw</recordid><startdate>20180901</startdate><enddate>20180901</enddate><creator>Nawaz, 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of genetically diverse virulent mating types of Phytophthora capsici from Capsicum annum L</title><author>Nawaz, Kiran ; Shahid, Ahmad Ali ; Bengyella, Louis ; Subhani, Muhammad Nasir ; Ali, Muhammad ; Anwar, Waheed ; Iftikhar, Sehrish ; Ali, Shinawar Waseem</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c408t-f8985192b9bf3d5f568dc058fd623aa40be7b77a8c02875ed144a9ee1abad0ce3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Acrylamides - pharmacology</topic><topic>Alanine - analogs & derivatives</topic><topic>Alanine - pharmacology</topic><topic>Applied Microbiology</topic><topic>Azoxystrobin</topic><topic>Biochemistry</topic><topic>Biological evolution</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>Capsicum</topic><topic>Capsicum - microbiology</topic><topic>Cluster Analysis</topic><topic>Deoxyribonucleic acid</topic><topic>Divergence</topic><topic>DNA</topic><topic>DNA, Ribosomal - genetics</topic><topic>Drug Resistance</topic><topic>Elongated structure</topic><topic>Environmental Engineering/Biotechnology</topic><topic>Evolution</topic><topic>Evolution, Molecular</topic><topic>Farm buildings</topic><topic>Farms</topic><topic>Fungicides</topic><topic>Fungicides, Industrial - pharmacology</topic><topic>Genes, Mating Type, Fungal - genetics</topic><topic>Genetic diversity</topic><topic>Genetic Variation</topic><topic>Growth patterns</topic><topic>Life Sciences</topic><topic>Mating</topic><topic>Mating types</topic><topic>Mefenoxam</topic><topic>Microbiology</topic><topic>Morpholines - pharmacology</topic><topic>Original Paper</topic><topic>Pakistan</topic><topic>Peptide Chain Elongation, Translational - genetics</topic><topic>Phenotype</topic><topic>Phylogeny</topic><topic>Phytophthora - classification</topic><topic>Phytophthora - drug effects</topic><topic>Phytophthora - genetics</topic><topic>Phytophthora - isolation & purification</topic><topic>Phytophthora capsici</topic><topic>Plant Diseases - microbiology</topic><topic>Plant Roots - parasitology</topic><topic>Population structure</topic><topic>Pyrimidines - pharmacology</topic><topic>Ribosomal DNA</topic><topic>Risk analysis</topic><topic>Risk Factors</topic><topic>Sporangia - cytology</topic><topic>Strobilurins - pharmacology</topic><topic>Temperature</topic><topic>Translation elongation</topic><topic>Tubulin</topic><topic>Tubulin - genetics</topic><topic>Virulence</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nawaz, Kiran</creatorcontrib><creatorcontrib>Shahid, Ahmad Ali</creatorcontrib><creatorcontrib>Bengyella, Louis</creatorcontrib><creatorcontrib>Subhani, Muhammad Nasir</creatorcontrib><creatorcontrib>Ali, Muhammad</creatorcontrib><creatorcontrib>Anwar, Waheed</creatorcontrib><creatorcontrib>Iftikhar, 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Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nawaz, Kiran</au><au>Shahid, Ahmad Ali</au><au>Bengyella, Louis</au><au>Subhani, Muhammad Nasir</au><au>Ali, Muhammad</au><au>Anwar, Waheed</au><au>Iftikhar, Sehrish</au><au>Ali, Shinawar Waseem</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Evidence of genetically diverse virulent mating types of Phytophthora capsici from Capsicum annum L</atitle><jtitle>World journal of microbiology & biotechnology</jtitle><stitle>World J Microbiol Biotechnol</stitle><addtitle>World J Microbiol Biotechnol</addtitle><date>2018-09-01</date><risdate>2018</risdate><volume>34</volume><issue>9</issue><spage>130</spage><epage>15</epage><pages>130-15</pages><artnum>130</artnum><issn>0959-3993</issn><eissn>1573-0972</eissn><abstract>Chili pepper (
Capsicum annum
L.) is an important economic crop that is severely destroyed by the filamentous oomycete
Phytophthora capsici
. Little is known about this pathogen in key chili pepper farms in Punjab province, Pakistan. We investigated the genetic diversity of
P. capsici
strains using standard taxonomic and molecular tools, and characterized their colony growth patterns as well as their disease severity on chili pepper plants under the greenhouse conditions. Phylogenetic analysis based on ribosomal DNA (rDNA), β-tubulin and translation elongation factor 1α loci revealed divergent evolution in the population structure of
P. capsici
isolates. The mean oospore diameter of mating type A1 isolates was greater than that of mating type A2 isolates. We provide first evidence of an uneven distribution of highly virulent mating type A1 and A2 of
P. capsici
that are insensitive to mefenoxam, pyrimorph, dimethomorph, and azoxystrobin fungicides, and represent a risk factor that could ease outpacing the current
P. capsici
management strategies.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><pmid>30101403</pmid><doi>10.1007/s11274-018-2511-y</doi><tpages>15</tpages></addata></record> |
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| ispartof | World journal of microbiology & biotechnology, 2018-09, Vol.34 (9), p.130-15, Article 130 |
| issn | 0959-3993 1573-0972 |
| language | eng |
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| source | MEDLINE; SpringerLink Journals - AutoHoldings |
| subjects | Acrylamides - pharmacology Alanine - analogs & derivatives Alanine - pharmacology Applied Microbiology Azoxystrobin Biochemistry Biological evolution Biomedical and Life Sciences Biotechnology Capsicum Capsicum - microbiology Cluster Analysis Deoxyribonucleic acid Divergence DNA DNA, Ribosomal - genetics Drug Resistance Elongated structure Environmental Engineering/Biotechnology Evolution Evolution, Molecular Farm buildings Farms Fungicides Fungicides, Industrial - pharmacology Genes, Mating Type, Fungal - genetics Genetic diversity Genetic Variation Growth patterns Life Sciences Mating Mating types Mefenoxam Microbiology Morpholines - pharmacology Original Paper Pakistan Peptide Chain Elongation, Translational - genetics Phenotype Phylogeny Phytophthora - classification Phytophthora - drug effects Phytophthora - genetics Phytophthora - isolation & purification Phytophthora capsici Plant Diseases - microbiology Plant Roots - parasitology Population structure Pyrimidines - pharmacology Ribosomal DNA Risk analysis Risk Factors Sporangia - cytology Strobilurins - pharmacology Temperature Translation elongation Tubulin Tubulin - genetics Virulence |
| title | Evidence of genetically diverse virulent mating types of Phytophthora capsici from Capsicum annum L |
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