Comparison of Swab Sampling Methods for Norovirus Recovery on Surfaces
Human noroviruses (HuNoVs) can be easily transferred by the contacts of humans or fomites. Swab sampling methods are widely used for recovering HuNoVs from small surfaces of various fomites or hard-to-reach locations and swab sampling conditions are important for the accurate detection of HuNoVs, wh...
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Veröffentlicht in: | Food and environmental virology 2018-12, Vol.10 (4), p.378-385 |
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description | Human noroviruses (HuNoVs) can be easily transferred by the contacts of humans or fomites. Swab sampling methods are widely used for recovering HuNoVs from small surfaces of various fomites or hard-to-reach locations and swab sampling conditions are important for the accurate detection of HuNoVs, which have a low infectious dose and relatively long persistence under a range of environmental conditions. Therefore, to determine the suitable swab sampling method for recovering HuNoVs from various surfaces, we evaluated combinations of four swab materials (cotton, microdenier polyester [a type of microfiber], polyurethane foam, and rayon) and three elution buffer solutions (phosphate-buffered saline [PBS], PBS with 0.2% Tween-80, and 3% beef extract-50 mM glycine [pH 9.5]). First, we inoculated HuNoVs or murine noroviruses (MuNoVs), the surrogate of HuNoVs, onto test coupons (10 × 10 cm) consisting of three common surface materials (high-density polyethylene, stainless steel, and wood). Coupons were swabbed using a combination of each swab material and elution buffer, and the viral recovery was measured by real-time reverse transcription quantitative polymerase chain reaction (RT-qPCR) or plaque assay. By RT-qPCR, we confirmed that the cotton swab–PBS and microdenier polyester–PBS combinations had recovery efficiencies greater than 80% for viruses on plastic and stainless steel surfaces. The cotton swab–PBS combination had the highest recovery efficiency on all surface materials via the plaque assay. Therefore, a cotton or a microdenier polyester swab with PBS could be a useful method for sampling HuNoVs on various surfaces. |
doi_str_mv | 10.1007/s12560-018-9353-5 |
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Swab sampling methods are widely used for recovering HuNoVs from small surfaces of various fomites or hard-to-reach locations and swab sampling conditions are important for the accurate detection of HuNoVs, which have a low infectious dose and relatively long persistence under a range of environmental conditions. Therefore, to determine the suitable swab sampling method for recovering HuNoVs from various surfaces, we evaluated combinations of four swab materials (cotton, microdenier polyester [a type of microfiber], polyurethane foam, and rayon) and three elution buffer solutions (phosphate-buffered saline [PBS], PBS with 0.2% Tween-80, and 3% beef extract-50 mM glycine [pH 9.5]). First, we inoculated HuNoVs or murine noroviruses (MuNoVs), the surrogate of HuNoVs, onto test coupons (10 × 10 cm) consisting of three common surface materials (high-density polyethylene, stainless steel, and wood). Coupons were swabbed using a combination of each swab material and elution buffer, and the viral recovery was measured by real-time reverse transcription quantitative polymerase chain reaction (RT-qPCR) or plaque assay. By RT-qPCR, we confirmed that the cotton swab–PBS and microdenier polyester–PBS combinations had recovery efficiencies greater than 80% for viruses on plastic and stainless steel surfaces. The cotton swab–PBS combination had the highest recovery efficiency on all surface materials via the plaque assay. Therefore, a cotton or a microdenier polyester swab with PBS could be a useful method for sampling HuNoVs on various surfaces.</description><identifier>ISSN: 1867-0334</identifier><identifier>EISSN: 1867-0342</identifier><identifier>DOI: 10.1007/s12560-018-9353-5</identifier><identifier>PMID: 30094754</identifier><language>eng</language><publisher>New York: Springer US</publisher><subject>Animals ; Biomedical and Life Sciences ; Biomedicine ; Buffer solutions ; Caliciviridae Infections - virology ; Chemistry/Food Science ; Cotton ; Elution ; Environmental conditions ; Fomites ; Fomites - virology ; Food Science ; Glycine ; High density polyethylenes ; Humans ; Mice ; Microfibers ; Norovirus - genetics ; Norovirus - isolation & purification ; Original Paper ; Plaque assay ; Plastics ; Polyesters ; Polyethylene ; Polymerase chain reaction ; Polyurethane ; Polyurethane foam ; RAW 264.7 Cells ; Rayon ; Real-Time Polymerase Chain Reaction ; Recovery ; Reverse Transcriptase Polymerase Chain Reaction ; Reverse transcription ; Sampling ; Sampling methods ; Stainless Steel ; Stainless steels ; Virology ; Viruses ; Wood ; Wood - virology</subject><ispartof>Food and environmental virology, 2018-12, Vol.10 (4), p.378-385</ispartof><rights>Springer Science+Business Media, LLC, part of Springer Nature 2018</rights><rights>Copyright Springer Science & Business Media 2018</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c372t-9a7b4aa9aef181238974f4af86caa1fb08414486802952e47db3349eb2b6a4f93</citedby><cites>FETCH-LOGICAL-c372t-9a7b4aa9aef181238974f4af86caa1fb08414486802952e47db3349eb2b6a4f93</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s12560-018-9353-5$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s12560-018-9353-5$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30094754$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Lee, Cheonghoon</creatorcontrib><creatorcontrib>Park, SungJun</creatorcontrib><creatorcontrib>Cho, Kyuseon</creatorcontrib><creatorcontrib>Yoo, Ju Eun</creatorcontrib><creatorcontrib>Lee, Sunghee</creatorcontrib><creatorcontrib>Ko, GwangPyo</creatorcontrib><title>Comparison of Swab Sampling Methods for Norovirus Recovery on Surfaces</title><title>Food and environmental virology</title><addtitle>Food Environ Virol</addtitle><addtitle>Food Environ Virol</addtitle><description>Human noroviruses (HuNoVs) can be easily transferred by the contacts of humans or fomites. Swab sampling methods are widely used for recovering HuNoVs from small surfaces of various fomites or hard-to-reach locations and swab sampling conditions are important for the accurate detection of HuNoVs, which have a low infectious dose and relatively long persistence under a range of environmental conditions. Therefore, to determine the suitable swab sampling method for recovering HuNoVs from various surfaces, we evaluated combinations of four swab materials (cotton, microdenier polyester [a type of microfiber], polyurethane foam, and rayon) and three elution buffer solutions (phosphate-buffered saline [PBS], PBS with 0.2% Tween-80, and 3% beef extract-50 mM glycine [pH 9.5]). First, we inoculated HuNoVs or murine noroviruses (MuNoVs), the surrogate of HuNoVs, onto test coupons (10 × 10 cm) consisting of three common surface materials (high-density polyethylene, stainless steel, and wood). Coupons were swabbed using a combination of each swab material and elution buffer, and the viral recovery was measured by real-time reverse transcription quantitative polymerase chain reaction (RT-qPCR) or plaque assay. By RT-qPCR, we confirmed that the cotton swab–PBS and microdenier polyester–PBS combinations had recovery efficiencies greater than 80% for viruses on plastic and stainless steel surfaces. The cotton swab–PBS combination had the highest recovery efficiency on all surface materials via the plaque assay. Therefore, a cotton or a microdenier polyester swab with PBS could be a useful method for sampling HuNoVs on various surfaces.</description><subject>Animals</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Buffer solutions</subject><subject>Caliciviridae Infections - virology</subject><subject>Chemistry/Food Science</subject><subject>Cotton</subject><subject>Elution</subject><subject>Environmental conditions</subject><subject>Fomites</subject><subject>Fomites - virology</subject><subject>Food Science</subject><subject>Glycine</subject><subject>High density polyethylenes</subject><subject>Humans</subject><subject>Mice</subject><subject>Microfibers</subject><subject>Norovirus - genetics</subject><subject>Norovirus - isolation & purification</subject><subject>Original Paper</subject><subject>Plaque assay</subject><subject>Plastics</subject><subject>Polyesters</subject><subject>Polyethylene</subject><subject>Polymerase chain reaction</subject><subject>Polyurethane</subject><subject>Polyurethane foam</subject><subject>RAW 264.7 Cells</subject><subject>Rayon</subject><subject>Real-Time Polymerase Chain Reaction</subject><subject>Recovery</subject><subject>Reverse Transcriptase Polymerase Chain Reaction</subject><subject>Reverse transcription</subject><subject>Sampling</subject><subject>Sampling methods</subject><subject>Stainless Steel</subject><subject>Stainless steels</subject><subject>Virology</subject><subject>Viruses</subject><subject>Wood</subject><subject>Wood - virology</subject><issn>1867-0334</issn><issn>1867-0342</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp1kF1LwzAUhoMobk5_gDdS8Mabaj6b5FKGU2EqOL0OaZfMjrapyTrZvzejc4LgVQ7ked9zeAA4R_AaQchvAsIsgylEIpWEkZQdgCESGU8hofhwPxM6ACchLCHMCGbkGAwIhJJyRodgMnZ1q30ZXJM4m8y-dJ7MdN1WZbNInszqw81DYp1Pnp1369J3IXk1hVsbv0liZNZ5qwsTTsGR1VUwZ7t3BN4nd2_jh3T6cv84vp2mBeF4lUrNc6q11MYigTARklNLtRVZoTWyORQUUSoyAbFk2FA-z-P10uQ4zzS1kozAVd_bevfZmbBSdRkKU1W6Ma4LCkPBmSSUbNHLP-jSdb6J1ymMsMighIxHCvVU4V0I3ljV-rLWfqMQVFvJqpesomS1laxYzFzsmru8NvN94sdqBHAPhPjVLIz_Xf1_6zcDToWr</recordid><startdate>20181201</startdate><enddate>20181201</enddate><creator>Lee, Cheonghoon</creator><creator>Park, SungJun</creator><creator>Cho, Kyuseon</creator><creator>Yoo, Ju Eun</creator><creator>Lee, Sunghee</creator><creator>Ko, GwangPyo</creator><general>Springer US</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20181201</creationdate><title>Comparison of Swab Sampling Methods for Norovirus Recovery on Surfaces</title><author>Lee, Cheonghoon ; Park, SungJun ; Cho, Kyuseon ; Yoo, Ju Eun ; Lee, Sunghee ; Ko, GwangPyo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c372t-9a7b4aa9aef181238974f4af86caa1fb08414486802952e47db3349eb2b6a4f93</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Animals</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Buffer solutions</topic><topic>Caliciviridae Infections - virology</topic><topic>Chemistry/Food Science</topic><topic>Cotton</topic><topic>Elution</topic><topic>Environmental conditions</topic><topic>Fomites</topic><topic>Fomites - virology</topic><topic>Food Science</topic><topic>Glycine</topic><topic>High density polyethylenes</topic><topic>Humans</topic><topic>Mice</topic><topic>Microfibers</topic><topic>Norovirus - genetics</topic><topic>Norovirus - isolation & purification</topic><topic>Original Paper</topic><topic>Plaque assay</topic><topic>Plastics</topic><topic>Polyesters</topic><topic>Polyethylene</topic><topic>Polymerase chain reaction</topic><topic>Polyurethane</topic><topic>Polyurethane foam</topic><topic>RAW 264.7 Cells</topic><topic>Rayon</topic><topic>Real-Time Polymerase Chain Reaction</topic><topic>Recovery</topic><topic>Reverse Transcriptase Polymerase Chain Reaction</topic><topic>Reverse transcription</topic><topic>Sampling</topic><topic>Sampling methods</topic><topic>Stainless Steel</topic><topic>Stainless steels</topic><topic>Virology</topic><topic>Viruses</topic><topic>Wood</topic><topic>Wood - virology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Lee, Cheonghoon</creatorcontrib><creatorcontrib>Park, SungJun</creatorcontrib><creatorcontrib>Cho, Kyuseon</creatorcontrib><creatorcontrib>Yoo, Ju Eun</creatorcontrib><creatorcontrib>Lee, Sunghee</creatorcontrib><creatorcontrib>Ko, GwangPyo</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Food and environmental virology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Lee, Cheonghoon</au><au>Park, SungJun</au><au>Cho, Kyuseon</au><au>Yoo, Ju Eun</au><au>Lee, Sunghee</au><au>Ko, GwangPyo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Comparison of Swab Sampling Methods for Norovirus Recovery on Surfaces</atitle><jtitle>Food and environmental virology</jtitle><stitle>Food Environ Virol</stitle><addtitle>Food Environ Virol</addtitle><date>2018-12-01</date><risdate>2018</risdate><volume>10</volume><issue>4</issue><spage>378</spage><epage>385</epage><pages>378-385</pages><issn>1867-0334</issn><eissn>1867-0342</eissn><abstract>Human noroviruses (HuNoVs) can be easily transferred by the contacts of humans or fomites. Swab sampling methods are widely used for recovering HuNoVs from small surfaces of various fomites or hard-to-reach locations and swab sampling conditions are important for the accurate detection of HuNoVs, which have a low infectious dose and relatively long persistence under a range of environmental conditions. Therefore, to determine the suitable swab sampling method for recovering HuNoVs from various surfaces, we evaluated combinations of four swab materials (cotton, microdenier polyester [a type of microfiber], polyurethane foam, and rayon) and three elution buffer solutions (phosphate-buffered saline [PBS], PBS with 0.2% Tween-80, and 3% beef extract-50 mM glycine [pH 9.5]). First, we inoculated HuNoVs or murine noroviruses (MuNoVs), the surrogate of HuNoVs, onto test coupons (10 × 10 cm) consisting of three common surface materials (high-density polyethylene, stainless steel, and wood). Coupons were swabbed using a combination of each swab material and elution buffer, and the viral recovery was measured by real-time reverse transcription quantitative polymerase chain reaction (RT-qPCR) or plaque assay. By RT-qPCR, we confirmed that the cotton swab–PBS and microdenier polyester–PBS combinations had recovery efficiencies greater than 80% for viruses on plastic and stainless steel surfaces. The cotton swab–PBS combination had the highest recovery efficiency on all surface materials via the plaque assay. Therefore, a cotton or a microdenier polyester swab with PBS could be a useful method for sampling HuNoVs on various surfaces.</abstract><cop>New York</cop><pub>Springer US</pub><pmid>30094754</pmid><doi>10.1007/s12560-018-9353-5</doi><tpages>8</tpages></addata></record> |
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subjects | Animals Biomedical and Life Sciences Biomedicine Buffer solutions Caliciviridae Infections - virology Chemistry/Food Science Cotton Elution Environmental conditions Fomites Fomites - virology Food Science Glycine High density polyethylenes Humans Mice Microfibers Norovirus - genetics Norovirus - isolation & purification Original Paper Plaque assay Plastics Polyesters Polyethylene Polymerase chain reaction Polyurethane Polyurethane foam RAW 264.7 Cells Rayon Real-Time Polymerase Chain Reaction Recovery Reverse Transcriptase Polymerase Chain Reaction Reverse transcription Sampling Sampling methods Stainless Steel Stainless steels Virology Viruses Wood Wood - virology |
title | Comparison of Swab Sampling Methods for Norovirus Recovery on Surfaces |
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