QSPR models for polychlorinated biphenyls: n-Octanol/water partition coefficient
The success of any QSPR model depends on the selection of proper descriptors. Exploring the usefulness of descriptors, especially, conceptual DFT based global electrophilicity index ( ω) along with the energy of lowest unoccupied molecular orbital ( E LUMO) and the number of chlorine substituents (...
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Veröffentlicht in: | Bioorganic & medicinal chemistry 2006-02, Vol.14 (4), p.1021-1028 |
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creator | Padmanabhan, J. Parthasarathi, R. Subramanian, V. Chattaraj, P.K. |
description | The success of any QSPR model depends on the selection of proper descriptors. Exploring the usefulness of descriptors, especially, conceptual DFT based global electrophilicity index (
ω) along with the energy of lowest unoccupied molecular orbital (
E
LUMO) and the number of chlorine substituents (
N
Cl) in analyzing the lipophilic behaviour (log
K
ow) for 133 PCBs congeners is assessed. Existence of high correlation indicates the significance of the developed model in property prediction.
The logarithmic
n-octanol/water partition coefficient (log
K
ow) is an important property for pharmacology, toxicology and medicinal chemistry. Quantitative structure–property relationship (QSPR) model for the lipophilic behaviour (log
K
ow) of the data set containing 133 polychlorinated biphenyl (PCB) congeners is analyzed using the conceptual density functional theory based global reactivity parameter such as electrophilicity index (
ω) along with energy of lowest unoccupied molecular orbital (
E
LUMO) and number of chlorine substituents (
N
Cl) as descriptors. A reasonably good coefficient of determination (
r
2
=
0.914) and the internal predictive ability
(
r
cv
2
=
0.909
)
values are obtained indicating the significance of the considered descriptors in the property analysis of PCBs. Further, the developed method has widespread applicability from chemical reactivity to toxicity analysis and in studies related to various physicochemical properties in the series of dioxins and other polyaromatic hydrocarbons. |
doi_str_mv | 10.1016/j.bmc.2005.09.017 |
format | Article |
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ω) along with the energy of lowest unoccupied molecular orbital (
E
LUMO) and the number of chlorine substituents (
N
Cl) in analyzing the lipophilic behaviour (log
K
ow) for 133 PCBs congeners is assessed. Existence of high correlation indicates the significance of the developed model in property prediction.
The logarithmic
n-octanol/water partition coefficient (log
K
ow) is an important property for pharmacology, toxicology and medicinal chemistry. Quantitative structure–property relationship (QSPR) model for the lipophilic behaviour (log
K
ow) of the data set containing 133 polychlorinated biphenyl (PCB) congeners is analyzed using the conceptual density functional theory based global reactivity parameter such as electrophilicity index (
ω) along with energy of lowest unoccupied molecular orbital (
E
LUMO) and number of chlorine substituents (
N
Cl) as descriptors. A reasonably good coefficient of determination (
r
2
=
0.914) and the internal predictive ability
(
r
cv
2
=
0.909
)
values are obtained indicating the significance of the considered descriptors in the property analysis of PCBs. Further, the developed method has widespread applicability from chemical reactivity to toxicity analysis and in studies related to various physicochemical properties in the series of dioxins and other polyaromatic hydrocarbons.</description><identifier>ISSN: 0968-0896</identifier><identifier>EISSN: 1464-3391</identifier><identifier>DOI: 10.1016/j.bmc.2005.09.017</identifier><identifier>PMID: 16214354</identifier><language>eng</language><publisher>Oxford: Elsevier Ltd</publisher><subject>Biological and medical sciences ; Chemical and industrial products toxicology. Toxic occupational diseases ; DFT ; Electrophilicity ; Medical sciences ; Miscellaneous ; Models, Chemical ; Molecular Structure ; n-Octanol/water partition coefficient ; Octanols - chemistry ; PCB ; Pharmacology. Drug treatments ; Polychlorinated Biphenyls - chemistry ; QSPR ; Quantitative Structure-Activity Relationship ; Toxicology ; Various organic compounds ; Water - chemistry</subject><ispartof>Bioorganic & medicinal chemistry, 2006-02, Vol.14 (4), p.1021-1028</ispartof><rights>2005 Elsevier Ltd</rights><rights>2006 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c478t-9cbb863440b55bc54b4e9e4a7fefc4346946910852c6edf7918e85afea91342e3</citedby><cites>FETCH-LOGICAL-c478t-9cbb863440b55bc54b4e9e4a7fefc4346946910852c6edf7918e85afea91342e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0968089605008709$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=17554788$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16214354$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Padmanabhan, J.</creatorcontrib><creatorcontrib>Parthasarathi, R.</creatorcontrib><creatorcontrib>Subramanian, V.</creatorcontrib><creatorcontrib>Chattaraj, P.K.</creatorcontrib><title>QSPR models for polychlorinated biphenyls: n-Octanol/water partition coefficient</title><title>Bioorganic & medicinal chemistry</title><addtitle>Bioorg Med Chem</addtitle><description>The success of any QSPR model depends on the selection of proper descriptors. Exploring the usefulness of descriptors, especially, conceptual DFT based global electrophilicity index (
ω) along with the energy of lowest unoccupied molecular orbital (
E
LUMO) and the number of chlorine substituents (
N
Cl) in analyzing the lipophilic behaviour (log
K
ow) for 133 PCBs congeners is assessed. Existence of high correlation indicates the significance of the developed model in property prediction.
The logarithmic
n-octanol/water partition coefficient (log
K
ow) is an important property for pharmacology, toxicology and medicinal chemistry. Quantitative structure–property relationship (QSPR) model for the lipophilic behaviour (log
K
ow) of the data set containing 133 polychlorinated biphenyl (PCB) congeners is analyzed using the conceptual density functional theory based global reactivity parameter such as electrophilicity index (
ω) along with energy of lowest unoccupied molecular orbital (
E
LUMO) and number of chlorine substituents (
N
Cl) as descriptors. A reasonably good coefficient of determination (
r
2
=
0.914) and the internal predictive ability
(
r
cv
2
=
0.909
)
values are obtained indicating the significance of the considered descriptors in the property analysis of PCBs. Further, the developed method has widespread applicability from chemical reactivity to toxicity analysis and in studies related to various physicochemical properties in the series of dioxins and other polyaromatic hydrocarbons.</description><subject>Biological and medical sciences</subject><subject>Chemical and industrial products toxicology. Toxic occupational diseases</subject><subject>DFT</subject><subject>Electrophilicity</subject><subject>Medical sciences</subject><subject>Miscellaneous</subject><subject>Models, Chemical</subject><subject>Molecular Structure</subject><subject>n-Octanol/water partition coefficient</subject><subject>Octanols - chemistry</subject><subject>PCB</subject><subject>Pharmacology. Drug treatments</subject><subject>Polychlorinated Biphenyls - chemistry</subject><subject>QSPR</subject><subject>Quantitative Structure-Activity Relationship</subject><subject>Toxicology</subject><subject>Various organic compounds</subject><subject>Water - chemistry</subject><issn>0968-0896</issn><issn>1464-3391</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kE1LxDAQhoMoun78AC_Si95akzZJGz2J-AXCrl_nkKYTzJI2a9JV9t-bZRe8CQNzmOcdZh6ETgkuCCb8cl60vS5KjFmBRYFJvYMmhHKaV5Ugu2iCBW9y3Ah-gA5jnGOMSyrIPjogvCS0YnSCZi9vs9es9x24mBkfsoV3K_3pfLCDGqHLWrv4hGHl4lU25FM9qsG7y580SqgKox2tHzLtwRirLQzjMdozykU42fYj9HF_9377mD9PH55ub55zTetmzIVu24ZXlOKWsVYz2lIQQFVtwGhaUS5SEdywUnPoTC1IAw1TBpQgFS2hOkIXm72L4L-WEEfZ26jBOTWAX0ZZpqyoeZ1AsgF18DEGMHIRbK_CShIs1xrlXCaNcq1RYiGTxpQ52y5ftj10f4mttwScbwEVtXImqEHb-MfVjKU3m8Rdb7ikF74tBBnXljR0NoAeZeftP2f8AtmrkDc</recordid><startdate>20060215</startdate><enddate>20060215</enddate><creator>Padmanabhan, J.</creator><creator>Parthasarathi, R.</creator><creator>Subramanian, V.</creator><creator>Chattaraj, P.K.</creator><general>Elsevier Ltd</general><general>Elsevier Science</general><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QO</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope></search><sort><creationdate>20060215</creationdate><title>QSPR models for polychlorinated biphenyls: n-Octanol/water partition coefficient</title><author>Padmanabhan, J. ; Parthasarathi, R. ; Subramanian, V. ; Chattaraj, P.K.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c478t-9cbb863440b55bc54b4e9e4a7fefc4346946910852c6edf7918e85afea91342e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Biological and medical sciences</topic><topic>Chemical and industrial products toxicology. Toxic occupational diseases</topic><topic>DFT</topic><topic>Electrophilicity</topic><topic>Medical sciences</topic><topic>Miscellaneous</topic><topic>Models, Chemical</topic><topic>Molecular Structure</topic><topic>n-Octanol/water partition coefficient</topic><topic>Octanols - chemistry</topic><topic>PCB</topic><topic>Pharmacology. Drug treatments</topic><topic>Polychlorinated Biphenyls - chemistry</topic><topic>QSPR</topic><topic>Quantitative Structure-Activity Relationship</topic><topic>Toxicology</topic><topic>Various organic compounds</topic><topic>Water - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Padmanabhan, J.</creatorcontrib><creatorcontrib>Parthasarathi, R.</creatorcontrib><creatorcontrib>Subramanian, V.</creatorcontrib><creatorcontrib>Chattaraj, P.K.</creatorcontrib><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Bioorganic & medicinal chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Padmanabhan, J.</au><au>Parthasarathi, R.</au><au>Subramanian, V.</au><au>Chattaraj, P.K.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>QSPR models for polychlorinated biphenyls: n-Octanol/water partition coefficient</atitle><jtitle>Bioorganic & medicinal chemistry</jtitle><addtitle>Bioorg Med Chem</addtitle><date>2006-02-15</date><risdate>2006</risdate><volume>14</volume><issue>4</issue><spage>1021</spage><epage>1028</epage><pages>1021-1028</pages><issn>0968-0896</issn><eissn>1464-3391</eissn><abstract>The success of any QSPR model depends on the selection of proper descriptors. Exploring the usefulness of descriptors, especially, conceptual DFT based global electrophilicity index (
ω) along with the energy of lowest unoccupied molecular orbital (
E
LUMO) and the number of chlorine substituents (
N
Cl) in analyzing the lipophilic behaviour (log
K
ow) for 133 PCBs congeners is assessed. Existence of high correlation indicates the significance of the developed model in property prediction.
The logarithmic
n-octanol/water partition coefficient (log
K
ow) is an important property for pharmacology, toxicology and medicinal chemistry. Quantitative structure–property relationship (QSPR) model for the lipophilic behaviour (log
K
ow) of the data set containing 133 polychlorinated biphenyl (PCB) congeners is analyzed using the conceptual density functional theory based global reactivity parameter such as electrophilicity index (
ω) along with energy of lowest unoccupied molecular orbital (
E
LUMO) and number of chlorine substituents (
N
Cl) as descriptors. A reasonably good coefficient of determination (
r
2
=
0.914) and the internal predictive ability
(
r
cv
2
=
0.909
)
values are obtained indicating the significance of the considered descriptors in the property analysis of PCBs. Further, the developed method has widespread applicability from chemical reactivity to toxicity analysis and in studies related to various physicochemical properties in the series of dioxins and other polyaromatic hydrocarbons.</abstract><cop>Oxford</cop><pub>Elsevier Ltd</pub><pmid>16214354</pmid><doi>10.1016/j.bmc.2005.09.017</doi><tpages>8</tpages></addata></record> |
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source | MEDLINE; Elsevier ScienceDirect Journals |
subjects | Biological and medical sciences Chemical and industrial products toxicology. Toxic occupational diseases DFT Electrophilicity Medical sciences Miscellaneous Models, Chemical Molecular Structure n-Octanol/water partition coefficient Octanols - chemistry PCB Pharmacology. Drug treatments Polychlorinated Biphenyls - chemistry QSPR Quantitative Structure-Activity Relationship Toxicology Various organic compounds Water - chemistry |
title | QSPR models for polychlorinated biphenyls: n-Octanol/water partition coefficient |
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