Analysis of the bacterial community from high alkaline (pH > 13) drainage water at a brown mud disposal site near Žiar nad Hronom (Banská Bystrica region, Slovakia) using 454 pyrosequencing

Brown mud, as a waste product of the industrial process of aluminum production, represents a great environmental burden due to its toxicity to living organisms. However, some microorganisms are able to survive in this habitat, and they can be used in bioremediation processes. Traditional cultivation...

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Veröffentlicht in:Folia microbiologica 2019-01, Vol.64 (1), p.83-90
Hauptverfasser: Kisková, Jana, Stramová, Zuzana, Javorský, Peter, Sedláková-Kaduková, Jana, Pristaš, Peter
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container_title Folia microbiologica
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creator Kisková, Jana
Stramová, Zuzana
Javorský, Peter
Sedláková-Kaduková, Jana
Pristaš, Peter
description Brown mud, as a waste product of the industrial process of aluminum production, represents a great environmental burden due to its toxicity to living organisms. However, some microorganisms are able to survive in this habitat, and they can be used in bioremediation processes. Traditional cultivation methods have a limited capacity to characterize bacterial composition in environmental samples. Recently, next-generation sequencing methods have provided new perspectives on microbial community studies. The aim of this study was to analyze the bacterial community in the drainage water of brown mud disposal site near Žiar nad Hronom (Banská Bystrica region, Slovakia) using 454 pyrosequencing. We obtained 9964 sequences assigned to 163 operational taxonomic units belonging to 10 bacterial phyla. The phylum Proteobacteria showed the highest abundance (80.39%) within the bacterial community, followed by Firmicutes (13.05%) and Bacteroidetes (5.64%). Other bacterial phyla showed an abundance lower than 1%. The classification yielded 85 genera. Sulfurospirillum spp. (45.19%) dominated the bacterial population, followed by Pseudomonas spp. (13.76%) and Exiguobacterium spp. (13.02%). These results indicate that high heavy metals content, high pH, and lack of essential nutrients are the drivers of a dramatic reduction of diversity in the bacterial population in this environment.
doi_str_mv 10.1007/s12223-018-0634-z
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However, some microorganisms are able to survive in this habitat, and they can be used in bioremediation processes. Traditional cultivation methods have a limited capacity to characterize bacterial composition in environmental samples. Recently, next-generation sequencing methods have provided new perspectives on microbial community studies. The aim of this study was to analyze the bacterial community in the drainage water of brown mud disposal site near Žiar nad Hronom (Banská Bystrica region, Slovakia) using 454 pyrosequencing. We obtained 9964 sequences assigned to 163 operational taxonomic units belonging to 10 bacterial phyla. The phylum Proteobacteria showed the highest abundance (80.39%) within the bacterial community, followed by Firmicutes (13.05%) and Bacteroidetes (5.64%). Other bacterial phyla showed an abundance lower than 1%. The classification yielded 85 genera. 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subjects Abundance
Aluminum
Applied Microbiology
Bacteria
Bacteria - classification
Bacteria - genetics
Bacteria - isolation & purification
Bacterial Physiological Phenomena
Biodegradation, Environmental
Biodiversity
Biomedical and Life Sciences
Bioremediation
Communities
Cultivation
Drainage
Drainage water
Environmental Engineering/Biotechnology
Essential nutrients
Genera
Heavy metals
High-Throughput Nucleotide Sequencing
Hydrogen-Ion Concentration
Immunology
Life Sciences
Metallurgy
Metals, Heavy - analysis
Metals, Heavy - metabolism
Microbial Consortia - genetics
Microbiology
Microorganisms
Mud
Nutrients
Original Article
pH effects
Phylogeny
RNA, Ribosomal, 16S - genetics
Sequence Analysis, DNA
Slovakia
Toxicity
Waste disposal
Waste Water - chemistry
Waste Water - microbiology
Water Pollutants, Chemical - analysis
Water Pollutants, Chemical - metabolism
title Analysis of the bacterial community from high alkaline (pH > 13) drainage water at a brown mud disposal site near Žiar nad Hronom (Banská Bystrica region, Slovakia) using 454 pyrosequencing
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