Genomic reorganization by IS26 in a blaNDM-5-bearing FII plasmid of Klebsiella pneumoniae isolated from a patient in Japan

An NDM-5-producing Klebsiella pneumoniae ST147 strain was isolated from a Japanese patient who had not travelled abroad in at least 5 years. Whole-genome sequencing revealed a genomic rearrangement in an FII plasmid harbouring blaNDM-5 due to the replicative transposition of IS26. A hypothetical str...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Journal of medical microbiology 2018-09, Vol.67 (9), p.1221-1224
Hauptverfasser: Takeuchi, Dan, Akeda, Yukihiro, Yoshida, Hisao, Hagiya, Hideharu, Yamamoto, Norihisa, Nishi, Isao, Yoshioka, Nori, Sugawara, Yo, Sakamoto, Noriko, Shanmugakani, Rathina Kumar, Deguchi, Matsuo, Tomono, Kazunori, Hamada, Shigeyuki
Format: Artikel
Sprache:eng
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 1224
container_issue 9
container_start_page 1221
container_title Journal of medical microbiology
container_volume 67
creator Takeuchi, Dan
Akeda, Yukihiro
Yoshida, Hisao
Hagiya, Hideharu
Yamamoto, Norihisa
Nishi, Isao
Yoshioka, Nori
Sugawara, Yo
Sakamoto, Noriko
Shanmugakani, Rathina Kumar
Deguchi, Matsuo
Tomono, Kazunori
Hamada, Shigeyuki
description An NDM-5-producing Klebsiella pneumoniae ST147 strain was isolated from a Japanese patient who had not travelled abroad in at least 5 years. Whole-genome sequencing revealed a genomic rearrangement in an FII plasmid harbouring blaNDM-5 due to the replicative transposition of IS26. A hypothetical structure was proposed for its ancestral plasmid, and comparative genomic analysis of the plasmid suggested the dissemination of structurally similar plasmids harbouring blaNDM-5 in Asian and Middle Eastern countries.
doi_str_mv 10.1099/jmm.0.000817
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_proquest_miscellaneous_2083708048</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>2083708048</sourcerecordid><originalsourceid>FETCH-LOGICAL-j192t-d99a4763b4d95a5b9b07fcad84e293a8067a5b302b5e4c2acf5c94807a68bd193</originalsourceid><addsrcrecordid>eNo1kDFPwzAUhC0kREthY0YeWVJeYieOR1RoKRQYgDl6TpzKVWyHOBnaX08qynTS6dOn0xFyE8M8Binvd9bOYQ4AeSzOyDTmgkVpxvmEXIawA4gFY_KCTBiA4FzEU3JYaeetKWmnfbdFZw7YG--o2tP1Z5JR4yhS1eD741uURkpjZ9yWLtdr2jYYrKmor-lro1UwummQtk4P1juDmprgG-x1RevO29HSjmbt-qPyBVt0V-S8xibo61POyPfy6WvxHG0-VuvFwybaxTLpo0pK5CJjilcyxVRJBaIuscq5TiTDHDIxtgwSlWpeJljWaSl5DgKzXFWxZDNy9-dtO_8z6NAX1oTyuNZpP4QigZwJyIHnI3p7QgdldVW0nbHY7Yv_v9gvJhVqJg</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>2083708048</pqid></control><display><type>article</type><title>Genomic reorganization by IS26 in a blaNDM-5-bearing FII plasmid of Klebsiella pneumoniae isolated from a patient in Japan</title><source>Microbiology Society</source><source>Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals</source><source>Alma/SFX Local Collection</source><creator>Takeuchi, Dan ; Akeda, Yukihiro ; Yoshida, Hisao ; Hagiya, Hideharu ; Yamamoto, Norihisa ; Nishi, Isao ; Yoshioka, Nori ; Sugawara, Yo ; Sakamoto, Noriko ; Shanmugakani, Rathina Kumar ; Deguchi, Matsuo ; Tomono, Kazunori ; Hamada, Shigeyuki</creator><creatorcontrib>Takeuchi, Dan ; Akeda, Yukihiro ; Yoshida, Hisao ; Hagiya, Hideharu ; Yamamoto, Norihisa ; Nishi, Isao ; Yoshioka, Nori ; Sugawara, Yo ; Sakamoto, Noriko ; Shanmugakani, Rathina Kumar ; Deguchi, Matsuo ; Tomono, Kazunori ; Hamada, Shigeyuki</creatorcontrib><description>An NDM-5-producing Klebsiella pneumoniae ST147 strain was isolated from a Japanese patient who had not travelled abroad in at least 5 years. Whole-genome sequencing revealed a genomic rearrangement in an FII plasmid harbouring blaNDM-5 due to the replicative transposition of IS26. A hypothetical structure was proposed for its ancestral plasmid, and comparative genomic analysis of the plasmid suggested the dissemination of structurally similar plasmids harbouring blaNDM-5 in Asian and Middle Eastern countries.</description><identifier>EISSN: 1473-5644</identifier><identifier>DOI: 10.1099/jmm.0.000817</identifier><identifier>PMID: 30074471</identifier><language>eng</language><publisher>England</publisher><ispartof>Journal of medical microbiology, 2018-09, Vol.67 (9), p.1221-1224</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27903,27904</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/30074471$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Takeuchi, Dan</creatorcontrib><creatorcontrib>Akeda, Yukihiro</creatorcontrib><creatorcontrib>Yoshida, Hisao</creatorcontrib><creatorcontrib>Hagiya, Hideharu</creatorcontrib><creatorcontrib>Yamamoto, Norihisa</creatorcontrib><creatorcontrib>Nishi, Isao</creatorcontrib><creatorcontrib>Yoshioka, Nori</creatorcontrib><creatorcontrib>Sugawara, Yo</creatorcontrib><creatorcontrib>Sakamoto, Noriko</creatorcontrib><creatorcontrib>Shanmugakani, Rathina Kumar</creatorcontrib><creatorcontrib>Deguchi, Matsuo</creatorcontrib><creatorcontrib>Tomono, Kazunori</creatorcontrib><creatorcontrib>Hamada, Shigeyuki</creatorcontrib><title>Genomic reorganization by IS26 in a blaNDM-5-bearing FII plasmid of Klebsiella pneumoniae isolated from a patient in Japan</title><title>Journal of medical microbiology</title><addtitle>J Med Microbiol</addtitle><description>An NDM-5-producing Klebsiella pneumoniae ST147 strain was isolated from a Japanese patient who had not travelled abroad in at least 5 years. Whole-genome sequencing revealed a genomic rearrangement in an FII plasmid harbouring blaNDM-5 due to the replicative transposition of IS26. A hypothetical structure was proposed for its ancestral plasmid, and comparative genomic analysis of the plasmid suggested the dissemination of structurally similar plasmids harbouring blaNDM-5 in Asian and Middle Eastern countries.</description><issn>1473-5644</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNo1kDFPwzAUhC0kREthY0YeWVJeYieOR1RoKRQYgDl6TpzKVWyHOBnaX08qynTS6dOn0xFyE8M8Binvd9bOYQ4AeSzOyDTmgkVpxvmEXIawA4gFY_KCTBiA4FzEU3JYaeetKWmnfbdFZw7YG--o2tP1Z5JR4yhS1eD741uURkpjZ9yWLtdr2jYYrKmor-lro1UwummQtk4P1juDmprgG-x1RevO29HSjmbt-qPyBVt0V-S8xibo61POyPfy6WvxHG0-VuvFwybaxTLpo0pK5CJjilcyxVRJBaIuscq5TiTDHDIxtgwSlWpeJljWaSl5DgKzXFWxZDNy9-dtO_8z6NAX1oTyuNZpP4QigZwJyIHnI3p7QgdldVW0nbHY7Yv_v9gvJhVqJg</recordid><startdate>201809</startdate><enddate>201809</enddate><creator>Takeuchi, Dan</creator><creator>Akeda, Yukihiro</creator><creator>Yoshida, Hisao</creator><creator>Hagiya, Hideharu</creator><creator>Yamamoto, Norihisa</creator><creator>Nishi, Isao</creator><creator>Yoshioka, Nori</creator><creator>Sugawara, Yo</creator><creator>Sakamoto, Noriko</creator><creator>Shanmugakani, Rathina Kumar</creator><creator>Deguchi, Matsuo</creator><creator>Tomono, Kazunori</creator><creator>Hamada, Shigeyuki</creator><scope>NPM</scope><scope>7X8</scope></search><sort><creationdate>201809</creationdate><title>Genomic reorganization by IS26 in a blaNDM-5-bearing FII plasmid of Klebsiella pneumoniae isolated from a patient in Japan</title><author>Takeuchi, Dan ; Akeda, Yukihiro ; Yoshida, Hisao ; Hagiya, Hideharu ; Yamamoto, Norihisa ; Nishi, Isao ; Yoshioka, Nori ; Sugawara, Yo ; Sakamoto, Noriko ; Shanmugakani, Rathina Kumar ; Deguchi, Matsuo ; Tomono, Kazunori ; Hamada, Shigeyuki</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-j192t-d99a4763b4d95a5b9b07fcad84e293a8067a5b302b5e4c2acf5c94807a68bd193</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Takeuchi, Dan</creatorcontrib><creatorcontrib>Akeda, Yukihiro</creatorcontrib><creatorcontrib>Yoshida, Hisao</creatorcontrib><creatorcontrib>Hagiya, Hideharu</creatorcontrib><creatorcontrib>Yamamoto, Norihisa</creatorcontrib><creatorcontrib>Nishi, Isao</creatorcontrib><creatorcontrib>Yoshioka, Nori</creatorcontrib><creatorcontrib>Sugawara, Yo</creatorcontrib><creatorcontrib>Sakamoto, Noriko</creatorcontrib><creatorcontrib>Shanmugakani, Rathina Kumar</creatorcontrib><creatorcontrib>Deguchi, Matsuo</creatorcontrib><creatorcontrib>Tomono, Kazunori</creatorcontrib><creatorcontrib>Hamada, Shigeyuki</creatorcontrib><collection>PubMed</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of medical microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Takeuchi, Dan</au><au>Akeda, Yukihiro</au><au>Yoshida, Hisao</au><au>Hagiya, Hideharu</au><au>Yamamoto, Norihisa</au><au>Nishi, Isao</au><au>Yoshioka, Nori</au><au>Sugawara, Yo</au><au>Sakamoto, Noriko</au><au>Shanmugakani, Rathina Kumar</au><au>Deguchi, Matsuo</au><au>Tomono, Kazunori</au><au>Hamada, Shigeyuki</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genomic reorganization by IS26 in a blaNDM-5-bearing FII plasmid of Klebsiella pneumoniae isolated from a patient in Japan</atitle><jtitle>Journal of medical microbiology</jtitle><addtitle>J Med Microbiol</addtitle><date>2018-09</date><risdate>2018</risdate><volume>67</volume><issue>9</issue><spage>1221</spage><epage>1224</epage><pages>1221-1224</pages><eissn>1473-5644</eissn><abstract>An NDM-5-producing Klebsiella pneumoniae ST147 strain was isolated from a Japanese patient who had not travelled abroad in at least 5 years. Whole-genome sequencing revealed a genomic rearrangement in an FII plasmid harbouring blaNDM-5 due to the replicative transposition of IS26. A hypothetical structure was proposed for its ancestral plasmid, and comparative genomic analysis of the plasmid suggested the dissemination of structurally similar plasmids harbouring blaNDM-5 in Asian and Middle Eastern countries.</abstract><cop>England</cop><pmid>30074471</pmid><doi>10.1099/jmm.0.000817</doi><tpages>4</tpages></addata></record>
fulltext fulltext
identifier EISSN: 1473-5644
ispartof Journal of medical microbiology, 2018-09, Vol.67 (9), p.1221-1224
issn 1473-5644
language eng
recordid cdi_proquest_miscellaneous_2083708048
source Microbiology Society; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; Alma/SFX Local Collection
title Genomic reorganization by IS26 in a blaNDM-5-bearing FII plasmid of Klebsiella pneumoniae isolated from a patient in Japan
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-25T04%3A54%3A20IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Genomic%20reorganization%20by%20IS26%20in%20a%20blaNDM-5-bearing%20FII%20plasmid%20of%20Klebsiella%20pneumoniae%20isolated%20from%20a%20patient%20in%20Japan&rft.jtitle=Journal%20of%20medical%20microbiology&rft.au=Takeuchi,%20Dan&rft.date=2018-09&rft.volume=67&rft.issue=9&rft.spage=1221&rft.epage=1224&rft.pages=1221-1224&rft.eissn=1473-5644&rft_id=info:doi/10.1099/jmm.0.000817&rft_dat=%3Cproquest_pubme%3E2083708048%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=2083708048&rft_id=info:pmid/30074471&rfr_iscdi=true