Preparation of arabinoxylobiose from rye xylan using family 10 Aspergillus aculeatus endo-1,4-β- d-xylanase
Commercial xylanase preparation Shearzyme ®, which contains the glycoside hydrolase family 10 endo-1,4-β- d-xylanase from Aspergillus aculeatus, was used to prepare short-chain arabinoxylo-oligosaccharides (AXOS) from rye arabinoxylan (AX). A major AXOS was formed as a hydrolysis product. Longer AXO...
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creator | Rantanen, Helena Virkki, Liisa Tuomainen, Päivi Kabel, Mirjam Schols, Henk Tenkanen, Maija |
description | Commercial xylanase preparation Shearzyme
®, which contains the glycoside hydrolase family 10
endo-1,4-β-
d-xylanase from
Aspergillus aculeatus, was used to prepare short-chain arabinoxylo-oligosaccharides (AXOS) from rye arabinoxylan (AX). A major AXOS was formed as a hydrolysis product. Longer AXOS were also produced as minor products. The pure GH10 xylanase from
A. aculeatus was used as a comparison to ensure that the formed AXOS were consequence of the endoxylanase‘s function instead of some side enzymes present in Shearzyme. The major AXOS was purified and the structure confirmed with various analysis methods (TLC, HPAEC-PAD, MALDI-TOF-MS, and one- and two-dimensional NMR spectroscopy with nano-probe) as α-
l-Ara
f-(1
→
3)-β-
d-Xyl
p-(1
→
4)-
d-Xyl
p (arabinoxylobiose). This is the first report on
13C NMR data of pure arabinoxylobiose. The yield of arabinoxylobiose was 12% from the quantified hydrolysis products. In conclusion, GH10 endoxylanase from
A. aculeatus is thus able to cut efficiently the xylosidic linkage next to the arabinofuranosyl-substituted xylose unit which is not typical for all the GH10 endoxylanases. Interestingly, pure
A. aculeatus xylanase showed notably activity towards
p-nitrophenyl-β-
d-xylopyranose. In previously studies longer AXOS have been produced with Shearzyme but the formation of short-chain AXOS by
A. aculeatus GH10 xylanase has not been studied before. |
doi_str_mv | 10.1016/j.carbpol.2006.11.022 |
format | Article |
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®, which contains the glycoside hydrolase family 10
endo-1,4-β-
d-xylanase from
Aspergillus aculeatus, was used to prepare short-chain arabinoxylo-oligosaccharides (AXOS) from rye arabinoxylan (AX). A major AXOS was formed as a hydrolysis product. Longer AXOS were also produced as minor products. The pure GH10 xylanase from
A. aculeatus was used as a comparison to ensure that the formed AXOS were consequence of the endoxylanase‘s function instead of some side enzymes present in Shearzyme. The major AXOS was purified and the structure confirmed with various analysis methods (TLC, HPAEC-PAD, MALDI-TOF-MS, and one- and two-dimensional NMR spectroscopy with nano-probe) as α-
l-Ara
f-(1
→
3)-β-
d-Xyl
p-(1
→
4)-
d-Xyl
p (arabinoxylobiose). This is the first report on
13C NMR data of pure arabinoxylobiose. The yield of arabinoxylobiose was 12% from the quantified hydrolysis products. In conclusion, GH10 endoxylanase from
A. aculeatus is thus able to cut efficiently the xylosidic linkage next to the arabinofuranosyl-substituted xylose unit which is not typical for all the GH10 endoxylanases. Interestingly, pure
A. aculeatus xylanase showed notably activity towards
p-nitrophenyl-β-
d-xylopyranose. In previously studies longer AXOS have been produced with Shearzyme but the formation of short-chain AXOS by
A. aculeatus GH10 xylanase has not been studied before.</description><identifier>ISSN: 0144-8617</identifier><identifier>EISSN: 1879-1344</identifier><identifier>DOI: 10.1016/j.carbpol.2006.11.022</identifier><identifier>CODEN: CAPOD8</identifier><language>eng</language><publisher>Oxford: Elsevier Ltd</publisher><subject>Applied sciences ; Arabinoxylan ; arabinoxylans ; Arabinoxylobiose ; Aspergillus aculeatus ; chemical structure ; enzyme activity ; Exact sciences and technology ; fermentation ; Glycoside hydrolase family 10 ; hydrolases ; hydrolysis ; Natural polymers ; oligosaccharides ; Physicochemistry of polymers ; rye ; Secale cereale ; Shearzyme ; Starch and polysaccharides ; xylan ; Xylanase ; xylanases ; Xylo-oligosaccharides ; xylooligosaccharides</subject><ispartof>Carbohydrate polymers, 2007-03, Vol.68 (2), p.350-359</ispartof><rights>2007</rights><rights>2007 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c394t-2f91957704948e7be764b818133bdc0932dedc18f56dfa9b1c38bb88e983a7053</citedby><cites>FETCH-LOGICAL-c394t-2f91957704948e7be764b818133bdc0932dedc18f56dfa9b1c38bb88e983a7053</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.carbpol.2006.11.022$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3541,27915,27916,45986</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=18578454$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><creatorcontrib>Rantanen, Helena</creatorcontrib><creatorcontrib>Virkki, Liisa</creatorcontrib><creatorcontrib>Tuomainen, Päivi</creatorcontrib><creatorcontrib>Kabel, Mirjam</creatorcontrib><creatorcontrib>Schols, Henk</creatorcontrib><creatorcontrib>Tenkanen, Maija</creatorcontrib><title>Preparation of arabinoxylobiose from rye xylan using family 10 Aspergillus aculeatus endo-1,4-β- d-xylanase</title><title>Carbohydrate polymers</title><description>Commercial xylanase preparation Shearzyme
®, which contains the glycoside hydrolase family 10
endo-1,4-β-
d-xylanase from
Aspergillus aculeatus, was used to prepare short-chain arabinoxylo-oligosaccharides (AXOS) from rye arabinoxylan (AX). A major AXOS was formed as a hydrolysis product. Longer AXOS were also produced as minor products. The pure GH10 xylanase from
A. aculeatus was used as a comparison to ensure that the formed AXOS were consequence of the endoxylanase‘s function instead of some side enzymes present in Shearzyme. The major AXOS was purified and the structure confirmed with various analysis methods (TLC, HPAEC-PAD, MALDI-TOF-MS, and one- and two-dimensional NMR spectroscopy with nano-probe) as α-
l-Ara
f-(1
→
3)-β-
d-Xyl
p-(1
→
4)-
d-Xyl
p (arabinoxylobiose). This is the first report on
13C NMR data of pure arabinoxylobiose. The yield of arabinoxylobiose was 12% from the quantified hydrolysis products. In conclusion, GH10 endoxylanase from
A. aculeatus is thus able to cut efficiently the xylosidic linkage next to the arabinofuranosyl-substituted xylose unit which is not typical for all the GH10 endoxylanases. Interestingly, pure
A. aculeatus xylanase showed notably activity towards
p-nitrophenyl-β-
d-xylopyranose. In previously studies longer AXOS have been produced with Shearzyme but the formation of short-chain AXOS by
A. aculeatus GH10 xylanase has not been studied before.</description><subject>Applied sciences</subject><subject>Arabinoxylan</subject><subject>arabinoxylans</subject><subject>Arabinoxylobiose</subject><subject>Aspergillus aculeatus</subject><subject>chemical structure</subject><subject>enzyme activity</subject><subject>Exact sciences and technology</subject><subject>fermentation</subject><subject>Glycoside hydrolase family 10</subject><subject>hydrolases</subject><subject>hydrolysis</subject><subject>Natural polymers</subject><subject>oligosaccharides</subject><subject>Physicochemistry of polymers</subject><subject>rye</subject><subject>Secale cereale</subject><subject>Shearzyme</subject><subject>Starch and polysaccharides</subject><subject>xylan</subject><subject>Xylanase</subject><subject>xylanases</subject><subject>Xylo-oligosaccharides</subject><subject>xylooligosaccharides</subject><issn>0144-8617</issn><issn>1879-1344</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2007</creationdate><recordtype>article</recordtype><recordid>eNqFkM-KFDEQhxtRcFx9BDEXPZk21Ul3kpMsi_9gQUH3HNLpypAh02mTbnFeywfxmcw6Ax7NpYri-6WKr2meA2uBwfDm0DqbxyXFtmNsaAFa1nUPmh0oqSlwIR42OwZCUDWAfNw8KeXA6huA7Zr4JeNis11DmknypLZjmNPPU0xjSAWJz-lI8glJHdmZbCXMe-LtMcQTAUauy4J5H2LcCrFui2jX2uE8JQqvBf39i5KJ_o3agk-bR97Ggs8u9aq5e__u281Hevv5w6eb61vquBYr7bwG3UvJhBYK5YhyEKMCBZyPk2OadxNODpTvh8lbPYLjahyVQq24laznV82r879LTt83LKs5huIw1iswbcV0TPFBdbqC_Rl0OZWS0Zslh6PNJwPM3Ls1B3Nxa-7dGgBT3dbcy8sCW5yNPtvZhfIvrHqpRC8q9-LMeZuM3efK3H3tGHDGpNJKyEq8PRNYffwImE1xAWeHU8joVjOl8J9b_gBPpJxv</recordid><startdate>20070321</startdate><enddate>20070321</enddate><creator>Rantanen, Helena</creator><creator>Virkki, Liisa</creator><creator>Tuomainen, Päivi</creator><creator>Kabel, Mirjam</creator><creator>Schols, Henk</creator><creator>Tenkanen, Maija</creator><general>Elsevier Ltd</general><general>Elsevier Science</general><scope>FBQ</scope><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>M7N</scope></search><sort><creationdate>20070321</creationdate><title>Preparation of arabinoxylobiose from rye xylan using family 10 Aspergillus aculeatus endo-1,4-β- d-xylanase</title><author>Rantanen, Helena ; Virkki, Liisa ; Tuomainen, Päivi ; Kabel, Mirjam ; Schols, Henk ; Tenkanen, Maija</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c394t-2f91957704948e7be764b818133bdc0932dedc18f56dfa9b1c38bb88e983a7053</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2007</creationdate><topic>Applied sciences</topic><topic>Arabinoxylan</topic><topic>arabinoxylans</topic><topic>Arabinoxylobiose</topic><topic>Aspergillus aculeatus</topic><topic>chemical structure</topic><topic>enzyme activity</topic><topic>Exact sciences and technology</topic><topic>fermentation</topic><topic>Glycoside hydrolase family 10</topic><topic>hydrolases</topic><topic>hydrolysis</topic><topic>Natural polymers</topic><topic>oligosaccharides</topic><topic>Physicochemistry of polymers</topic><topic>rye</topic><topic>Secale cereale</topic><topic>Shearzyme</topic><topic>Starch and polysaccharides</topic><topic>xylan</topic><topic>Xylanase</topic><topic>xylanases</topic><topic>Xylo-oligosaccharides</topic><topic>xylooligosaccharides</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Rantanen, Helena</creatorcontrib><creatorcontrib>Virkki, Liisa</creatorcontrib><creatorcontrib>Tuomainen, Päivi</creatorcontrib><creatorcontrib>Kabel, Mirjam</creatorcontrib><creatorcontrib>Schols, Henk</creatorcontrib><creatorcontrib>Tenkanen, Maija</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><jtitle>Carbohydrate polymers</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Rantanen, Helena</au><au>Virkki, Liisa</au><au>Tuomainen, Päivi</au><au>Kabel, Mirjam</au><au>Schols, Henk</au><au>Tenkanen, Maija</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Preparation of arabinoxylobiose from rye xylan using family 10 Aspergillus aculeatus endo-1,4-β- d-xylanase</atitle><jtitle>Carbohydrate polymers</jtitle><date>2007-03-21</date><risdate>2007</risdate><volume>68</volume><issue>2</issue><spage>350</spage><epage>359</epage><pages>350-359</pages><issn>0144-8617</issn><eissn>1879-1344</eissn><coden>CAPOD8</coden><abstract>Commercial xylanase preparation Shearzyme
®, which contains the glycoside hydrolase family 10
endo-1,4-β-
d-xylanase from
Aspergillus aculeatus, was used to prepare short-chain arabinoxylo-oligosaccharides (AXOS) from rye arabinoxylan (AX). A major AXOS was formed as a hydrolysis product. Longer AXOS were also produced as minor products. The pure GH10 xylanase from
A. aculeatus was used as a comparison to ensure that the formed AXOS were consequence of the endoxylanase‘s function instead of some side enzymes present in Shearzyme. The major AXOS was purified and the structure confirmed with various analysis methods (TLC, HPAEC-PAD, MALDI-TOF-MS, and one- and two-dimensional NMR spectroscopy with nano-probe) as α-
l-Ara
f-(1
→
3)-β-
d-Xyl
p-(1
→
4)-
d-Xyl
p (arabinoxylobiose). This is the first report on
13C NMR data of pure arabinoxylobiose. The yield of arabinoxylobiose was 12% from the quantified hydrolysis products. In conclusion, GH10 endoxylanase from
A. aculeatus is thus able to cut efficiently the xylosidic linkage next to the arabinofuranosyl-substituted xylose unit which is not typical for all the GH10 endoxylanases. Interestingly, pure
A. aculeatus xylanase showed notably activity towards
p-nitrophenyl-β-
d-xylopyranose. In previously studies longer AXOS have been produced with Shearzyme but the formation of short-chain AXOS by
A. aculeatus GH10 xylanase has not been studied before.</abstract><cop>Oxford</cop><pub>Elsevier Ltd</pub><doi>10.1016/j.carbpol.2006.11.022</doi><tpages>10</tpages></addata></record> |
fulltext | fulltext |
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ispartof | Carbohydrate polymers, 2007-03, Vol.68 (2), p.350-359 |
issn | 0144-8617 1879-1344 |
language | eng |
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source | ScienceDirect Journals (5 years ago - present) |
subjects | Applied sciences Arabinoxylan arabinoxylans Arabinoxylobiose Aspergillus aculeatus chemical structure enzyme activity Exact sciences and technology fermentation Glycoside hydrolase family 10 hydrolases hydrolysis Natural polymers oligosaccharides Physicochemistry of polymers rye Secale cereale Shearzyme Starch and polysaccharides xylan Xylanase xylanases Xylo-oligosaccharides xylooligosaccharides |
title | Preparation of arabinoxylobiose from rye xylan using family 10 Aspergillus aculeatus endo-1,4-β- d-xylanase |
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