Purification of active recombinant human histone deacetylase 1 (HDAC1) overexpressed in Escherichia coli
Objective We attempted to overexpress Human Histone Deacetylase 1 (HDAC1) in Escherichia coli . Results A synthetic gene coding for HDAC1, and optimised for E. coli codon usage, was cloned into pBADHisB, generating pBAD-rHDAC1. This construct was used to transform E. coli TOP10, and the target prote...
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Veröffentlicht in: | Biotechnology letters 2018-10, Vol.40 (9-10), p.1355-1363 |
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creator | Stefan, Alessandra Calonghi, Natalia Schipani, Fabrizio Dal Piaz, Fabrizio Sartor, Giorgio Hochkoeppler, Alejandro |
description | Objective
We attempted to overexpress Human Histone Deacetylase 1 (HDAC1) in
Escherichia coli
.
Results
A synthetic gene coding for HDAC1, and optimised for
E. coli
codon usage, was cloned into pBADHisB, generating pBAD-rHDAC1. This construct was used to transform
E. coli
TOP10, and the target protein was overexpressed and partially purified. According to its elution volume from a Superdex 200 column, the partially purified rHDAC1 was obtained in aggregated form, i.e., as an octamer. The dissociation of octameric HDAC1 was tested using several agents, among which sodium dodecyl sulfate was competent in partially dissociating rHDAC1 aggregates. When the enzyme activity was tested
in vitro
using
3
H-acetyl-labelled histones both protein samples, aggregated and dissociated, were active. Hence, our results suggest that
E. coli
represents an alternative system for the production of the recombinant HDAC1.
Conclusions
We described a procedure for the overexpression in
E. coli
of recombinant HDAC1, the purification of which in active form can be successfully performed, although yielding an octameric aggregate. |
doi_str_mv | 10.1007/s10529-018-2585-5 |
format | Article |
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We attempted to overexpress Human Histone Deacetylase 1 (HDAC1) in
Escherichia coli
.
Results
A synthetic gene coding for HDAC1, and optimised for
E. coli
codon usage, was cloned into pBADHisB, generating pBAD-rHDAC1. This construct was used to transform
E. coli
TOP10, and the target protein was overexpressed and partially purified. According to its elution volume from a Superdex 200 column, the partially purified rHDAC1 was obtained in aggregated form, i.e., as an octamer. The dissociation of octameric HDAC1 was tested using several agents, among which sodium dodecyl sulfate was competent in partially dissociating rHDAC1 aggregates. When the enzyme activity was tested
in vitro
using
3
H-acetyl-labelled histones both protein samples, aggregated and dissociated, were active. Hence, our results suggest that
E. coli
represents an alternative system for the production of the recombinant HDAC1.
Conclusions
We described a procedure for the overexpression in
E. coli
of recombinant HDAC1, the purification of which in active form can be successfully performed, although yielding an octameric aggregate.</description><identifier>ISSN: 0141-5492</identifier><identifier>EISSN: 1573-6776</identifier><identifier>DOI: 10.1007/s10529-018-2585-5</identifier><identifier>PMID: 29948514</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Applied Microbiology ; Bacteria ; Biochemistry ; Biomedical and Life Sciences ; Biotechnology ; E coli ; Elution ; Enzymatic activity ; Enzyme activity ; Escherichia coli ; Escherichia coli - genetics ; Escherichia coli - metabolism ; Histone deacetylase ; Histone Deacetylase 1 - genetics ; Histone Deacetylase 1 - isolation & purification ; Histone Deacetylase 1 - metabolism ; Histones ; Humans ; Life Sciences ; Microbiology ; Original Research Paper ; Protein Engineering - methods ; Proteins ; Purification ; Recombinant Proteins - genetics ; Recombinant Proteins - isolation & purification ; Recombinant Proteins - metabolism ; Sodium dodecyl sulfate ; Sodium lauryl sulfate</subject><ispartof>Biotechnology letters, 2018-10, Vol.40 (9-10), p.1355-1363</ispartof><rights>Springer Nature B.V. 2018</rights><rights>Biotechnology Letters is a copyright of Springer, (2018). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c409t-99fe09f442c8fdd44bc88019a27f9d441961a902036b4624588919e2dfe4d7963</citedby><cites>FETCH-LOGICAL-c409t-99fe09f442c8fdd44bc88019a27f9d441961a902036b4624588919e2dfe4d7963</cites><orcidid>0000-0002-5144-2154</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10529-018-2585-5$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10529-018-2585-5$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29948514$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Stefan, Alessandra</creatorcontrib><creatorcontrib>Calonghi, Natalia</creatorcontrib><creatorcontrib>Schipani, Fabrizio</creatorcontrib><creatorcontrib>Dal Piaz, Fabrizio</creatorcontrib><creatorcontrib>Sartor, Giorgio</creatorcontrib><creatorcontrib>Hochkoeppler, Alejandro</creatorcontrib><title>Purification of active recombinant human histone deacetylase 1 (HDAC1) overexpressed in Escherichia coli</title><title>Biotechnology letters</title><addtitle>Biotechnol Lett</addtitle><addtitle>Biotechnol Lett</addtitle><description>Objective
We attempted to overexpress Human Histone Deacetylase 1 (HDAC1) in
Escherichia coli
.
Results
A synthetic gene coding for HDAC1, and optimised for
E. coli
codon usage, was cloned into pBADHisB, generating pBAD-rHDAC1. This construct was used to transform
E. coli
TOP10, and the target protein was overexpressed and partially purified. According to its elution volume from a Superdex 200 column, the partially purified rHDAC1 was obtained in aggregated form, i.e., as an octamer. The dissociation of octameric HDAC1 was tested using several agents, among which sodium dodecyl sulfate was competent in partially dissociating rHDAC1 aggregates. When the enzyme activity was tested
in vitro
using
3
H-acetyl-labelled histones both protein samples, aggregated and dissociated, were active. Hence, our results suggest that
E. coli
represents an alternative system for the production of the recombinant HDAC1.
Conclusions
We described a procedure for the overexpression in
E. coli
of recombinant HDAC1, the purification of which in active form can be successfully performed, although yielding an octameric aggregate.</description><subject>Applied Microbiology</subject><subject>Bacteria</subject><subject>Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>E coli</subject><subject>Elution</subject><subject>Enzymatic activity</subject><subject>Enzyme activity</subject><subject>Escherichia coli</subject><subject>Escherichia coli - genetics</subject><subject>Escherichia coli - metabolism</subject><subject>Histone deacetylase</subject><subject>Histone Deacetylase 1 - genetics</subject><subject>Histone Deacetylase 1 - isolation & purification</subject><subject>Histone Deacetylase 1 - metabolism</subject><subject>Histones</subject><subject>Humans</subject><subject>Life Sciences</subject><subject>Microbiology</subject><subject>Original Research Paper</subject><subject>Protein Engineering - methods</subject><subject>Proteins</subject><subject>Purification</subject><subject>Recombinant Proteins - genetics</subject><subject>Recombinant Proteins - isolation & purification</subject><subject>Recombinant Proteins - metabolism</subject><subject>Sodium dodecyl sulfate</subject><subject>Sodium lauryl sulfate</subject><issn>0141-5492</issn><issn>1573-6776</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1kU-LFDEQxYMo7rj6AbxIwMt6aK1k8ve4jKsrLOhBzyGTrthZupMx6V7cb28PsyoInoqifu9VUY-QlwzeMgD9rjGQ3HbATMelkZ18RDZM6m2ntFaPyQaYYJ0Ulp-RZ63dAoDVoJ-SM26tMJKJDRm-LDXFFPycSqYlUh_mdIe0YijTPmWfZzosk890SG0uGWmPPuB8P_qGlNGL6_eXO_aGljus-PNQsTXsacr0qoUBawpD8jSUMT0nT6IfG754qOfk24err7vr7ubzx0-7y5suCLBzZ21EsFEIHkzseyH2wRhg1nMd7doyq5i3wGGr9kJxIY2xzCLvI4peW7U9Jxcn30MtPxZss5tSCziOPmNZmuOgwGgF-oi-_ge9LUvN63UrJeVWSVBipdiJCrW0VjG6Q02Tr_eOgTvG4E4xuDUGd4zByVXz6sF52U_Y_1H8_vsK8BPQ1lH-jvXv6v-7_gLdaJEj</recordid><startdate>20181001</startdate><enddate>20181001</enddate><creator>Stefan, Alessandra</creator><creator>Calonghi, Natalia</creator><creator>Schipani, Fabrizio</creator><creator>Dal Piaz, Fabrizio</creator><creator>Sartor, Giorgio</creator><creator>Hochkoeppler, Alejandro</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7QR</scope><scope>7T7</scope><scope>7TB</scope><scope>7U5</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>L6V</scope><scope>L7M</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>M7S</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PTHSS</scope><scope>Q9U</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-5144-2154</orcidid></search><sort><creationdate>20181001</creationdate><title>Purification of active recombinant human histone deacetylase 1 (HDAC1) overexpressed in Escherichia coli</title><author>Stefan, Alessandra ; Calonghi, Natalia ; Schipani, Fabrizio ; Dal Piaz, Fabrizio ; Sartor, Giorgio ; Hochkoeppler, Alejandro</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c409t-99fe09f442c8fdd44bc88019a27f9d441961a902036b4624588919e2dfe4d7963</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Applied Microbiology</topic><topic>Bacteria</topic><topic>Biochemistry</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>E coli</topic><topic>Elution</topic><topic>Enzymatic activity</topic><topic>Enzyme activity</topic><topic>Escherichia coli</topic><topic>Escherichia coli - genetics</topic><topic>Escherichia coli - metabolism</topic><topic>Histone deacetylase</topic><topic>Histone Deacetylase 1 - genetics</topic><topic>Histone Deacetylase 1 - isolation & purification</topic><topic>Histone Deacetylase 1 - metabolism</topic><topic>Histones</topic><topic>Humans</topic><topic>Life Sciences</topic><topic>Microbiology</topic><topic>Original Research Paper</topic><topic>Protein Engineering - methods</topic><topic>Proteins</topic><topic>Purification</topic><topic>Recombinant Proteins - genetics</topic><topic>Recombinant Proteins - isolation & purification</topic><topic>Recombinant Proteins - metabolism</topic><topic>Sodium dodecyl sulfate</topic><topic>Sodium lauryl sulfate</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Stefan, Alessandra</creatorcontrib><creatorcontrib>Calonghi, Natalia</creatorcontrib><creatorcontrib>Schipani, Fabrizio</creatorcontrib><creatorcontrib>Dal Piaz, Fabrizio</creatorcontrib><creatorcontrib>Sartor, Giorgio</creatorcontrib><creatorcontrib>Hochkoeppler, Alejandro</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Chemoreception Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Materials Science & Engineering Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Engineering Collection</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Science Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biological Science Database</collection><collection>Engineering Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Engineering Collection</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><jtitle>Biotechnology letters</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Stefan, Alessandra</au><au>Calonghi, Natalia</au><au>Schipani, Fabrizio</au><au>Dal Piaz, Fabrizio</au><au>Sartor, Giorgio</au><au>Hochkoeppler, Alejandro</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Purification of active recombinant human histone deacetylase 1 (HDAC1) overexpressed in Escherichia coli</atitle><jtitle>Biotechnology letters</jtitle><stitle>Biotechnol Lett</stitle><addtitle>Biotechnol Lett</addtitle><date>2018-10-01</date><risdate>2018</risdate><volume>40</volume><issue>9-10</issue><spage>1355</spage><epage>1363</epage><pages>1355-1363</pages><issn>0141-5492</issn><eissn>1573-6776</eissn><abstract>Objective
We attempted to overexpress Human Histone Deacetylase 1 (HDAC1) in
Escherichia coli
.
Results
A synthetic gene coding for HDAC1, and optimised for
E. coli
codon usage, was cloned into pBADHisB, generating pBAD-rHDAC1. This construct was used to transform
E. coli
TOP10, and the target protein was overexpressed and partially purified. According to its elution volume from a Superdex 200 column, the partially purified rHDAC1 was obtained in aggregated form, i.e., as an octamer. The dissociation of octameric HDAC1 was tested using several agents, among which sodium dodecyl sulfate was competent in partially dissociating rHDAC1 aggregates. When the enzyme activity was tested
in vitro
using
3
H-acetyl-labelled histones both protein samples, aggregated and dissociated, were active. Hence, our results suggest that
E. coli
represents an alternative system for the production of the recombinant HDAC1.
Conclusions
We described a procedure for the overexpression in
E. coli
of recombinant HDAC1, the purification of which in active form can be successfully performed, although yielding an octameric aggregate.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><pmid>29948514</pmid><doi>10.1007/s10529-018-2585-5</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0002-5144-2154</orcidid></addata></record> |
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subjects | Applied Microbiology Bacteria Biochemistry Biomedical and Life Sciences Biotechnology E coli Elution Enzymatic activity Enzyme activity Escherichia coli Escherichia coli - genetics Escherichia coli - metabolism Histone deacetylase Histone Deacetylase 1 - genetics Histone Deacetylase 1 - isolation & purification Histone Deacetylase 1 - metabolism Histones Humans Life Sciences Microbiology Original Research Paper Protein Engineering - methods Proteins Purification Recombinant Proteins - genetics Recombinant Proteins - isolation & purification Recombinant Proteins - metabolism Sodium dodecyl sulfate Sodium lauryl sulfate |
title | Purification of active recombinant human histone deacetylase 1 (HDAC1) overexpressed in Escherichia coli |
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