Evolutionary, interaction and expression analysis of floral meristem identity genes in inflorescence induction of the second crop in two-crop-a-year grape culture system
The fruitfulness of grapevines ( Vitis vinifera L.) is determined to a large extent by the differentiation of uncommitted meristems, especially in the second-crop production of some varieties, where the intermediate of inflorescence and tendril accounts for a significant proportion in two-crop-a-yea...
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description | The fruitfulness of grapevines (
Vitis vinifera
L.) is determined to a large extent by the differentiation of uncommitted meristems, especially in the second-crop production of some varieties, where the intermediate of inflorescence and tendril accounts for a significant proportion in two-crop-a-year grape culture system. The differentiation of uncommitted lateral meristem was reported to be regulated by a network, whose backbone was composed of several floral meristem identity genes. In the present study, the phylogenetics of grape floral meristem identity genes with their orthologues in other species, and their conserved domain and interaction networks were analysed. In addition, the effects of chlormequat chloride and pinching treatments on the expression profiles of floral meristem identity genes and content of gibberellic acid (GAs) and zeatin riboside (ZR), as well as the ratio of ZR/GAs in buds that were used to produce the second crop, and the ratio of inflorescence induction of the second crop were studied in ‘Summer Black’. The present results showed that floral meristem identity genes of grape and their orthologues in one or more among
Malus domastic
,
Citrus sinensis
,
Theobroma cacao
,
Nicotiana tabacum
,
Solanum lycopersicum
and
Glycine hirsutum
, probably originated from a common ancestor. Interaction networks of six grape-floral meristem identity genes indicated that the inflorescence induction and floral development were regulated by one more complex network, and expression profiles of genes that involved in this network could be affected by each other. Expression profiles of eight floral meristem identity genes were affected by chlormequat chloride and pinching treatments, and higher expression levels of
FT
,
TFL1A
and
TFL1B
, as well as lower expression levels of
LFY
from 3 days before full bloom to 11 days after full bloom were thought to play important roles in promoting the formation of inflorescence primordial of the second crop, and higher expression levels of
CAL A
,
SOC1
and
TFL1A
at 18 days after full bloom (DAF) could promote the development of inflorescence primordial. In addition, lower ratio of ZR/GAs at 3 days before full bloom and 4 days after full bloom could promote the formation of uncommitted lateral meristems in chlormequat chloride and pinching-treated plants, and higher ratio at 11 days after full bloom was the main reason for the formation of more inflorescences after chlormequat chloride treatment. |
doi_str_mv | 10.1007/s12041-018-0929-5 |
format | Article |
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Vitis vinifera
L.) is determined to a large extent by the differentiation of uncommitted meristems, especially in the second-crop production of some varieties, where the intermediate of inflorescence and tendril accounts for a significant proportion in two-crop-a-year grape culture system. The differentiation of uncommitted lateral meristem was reported to be regulated by a network, whose backbone was composed of several floral meristem identity genes. In the present study, the phylogenetics of grape floral meristem identity genes with their orthologues in other species, and their conserved domain and interaction networks were analysed. In addition, the effects of chlormequat chloride and pinching treatments on the expression profiles of floral meristem identity genes and content of gibberellic acid (GAs) and zeatin riboside (ZR), as well as the ratio of ZR/GAs in buds that were used to produce the second crop, and the ratio of inflorescence induction of the second crop were studied in ‘Summer Black’. The present results showed that floral meristem identity genes of grape and their orthologues in one or more among
Malus domastic
,
Citrus sinensis
,
Theobroma cacao
,
Nicotiana tabacum
,
Solanum lycopersicum
and
Glycine hirsutum
, probably originated from a common ancestor. Interaction networks of six grape-floral meristem identity genes indicated that the inflorescence induction and floral development were regulated by one more complex network, and expression profiles of genes that involved in this network could be affected by each other. Expression profiles of eight floral meristem identity genes were affected by chlormequat chloride and pinching treatments, and higher expression levels of
FT
,
TFL1A
and
TFL1B
, as well as lower expression levels of
LFY
from 3 days before full bloom to 11 days after full bloom were thought to play important roles in promoting the formation of inflorescence primordial of the second crop, and higher expression levels of
CAL A
,
SOC1
and
TFL1A
at 18 days after full bloom (DAF) could promote the development of inflorescence primordial. In addition, lower ratio of ZR/GAs at 3 days before full bloom and 4 days after full bloom could promote the formation of uncommitted lateral meristems in chlormequat chloride and pinching-treated plants, and higher ratio at 11 days after full bloom was the main reason for the formation of more inflorescences after chlormequat chloride treatment.</description><identifier>ISSN: 0022-1333</identifier><identifier>EISSN: 0973-7731</identifier><identifier>DOI: 10.1007/s12041-018-0929-5</identifier><identifier>PMID: 29932064</identifier><language>eng</language><publisher>New Delhi: Springer India</publisher><subject>Analysis ; Animal Genetics and Genomics ; Biomedical and Life Sciences ; Chloride ; Chlorides ; Citrus sinensis ; Crop production ; Crops ; Cytokinins ; Evolutionary Biology ; Genes ; Genetic research ; Gibberellic acid ; Gibberellins ; Glycine max ; Gossypium hirsutum ; Grapes ; Life Sciences ; Malus domestica ; Meristems ; Microbial Genetics and Genomics ; Nicotiana tabacum ; Phylogeny ; Plant Genetics and Genomics ; Research Article ; Solanum lycopersicum ; Theobroma cacao ; Vitis vinifera ; Wildlife conservation ; Zeatin riboside</subject><ispartof>Journal of genetics, 2018-06, Vol.97 (2), p.439-451</ispartof><rights>Indian Academy of Sciences 2018</rights><rights>COPYRIGHT 2018 Springer</rights><rights>Journal of Genetics is a copyright of Springer, (2018). All Rights Reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c439t-84278a4ff5de24111f39c727f32bda68e4ad5fb2518e471079abec3d5908a4693</citedby><cites>FETCH-LOGICAL-c439t-84278a4ff5de24111f39c727f32bda68e4ad5fb2518e471079abec3d5908a4693</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s12041-018-0929-5$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s12041-018-0929-5$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29932064$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Guo, Rongrong</creatorcontrib><creatorcontrib>Wang, Bo</creatorcontrib><creatorcontrib>Lin, Ling</creatorcontrib><creatorcontrib>Cheng, Guo</creatorcontrib><creatorcontrib>Zhou, Sihong</creatorcontrib><creatorcontrib>Xie, Shuyu</creatorcontrib><creatorcontrib>Shi, Xiaofang</creatorcontrib><creatorcontrib>Cao, Muming</creatorcontrib><creatorcontrib>Zhang, Ying</creatorcontrib><creatorcontrib>Bai, Xianjin</creatorcontrib><title>Evolutionary, interaction and expression analysis of floral meristem identity genes in inflorescence induction of the second crop in two-crop-a-year grape culture system</title><title>Journal of genetics</title><addtitle>J Genet</addtitle><addtitle>J Genet</addtitle><description>The fruitfulness of grapevines (
Vitis vinifera
L.) is determined to a large extent by the differentiation of uncommitted meristems, especially in the second-crop production of some varieties, where the intermediate of inflorescence and tendril accounts for a significant proportion in two-crop-a-year grape culture system. The differentiation of uncommitted lateral meristem was reported to be regulated by a network, whose backbone was composed of several floral meristem identity genes. In the present study, the phylogenetics of grape floral meristem identity genes with their orthologues in other species, and their conserved domain and interaction networks were analysed. In addition, the effects of chlormequat chloride and pinching treatments on the expression profiles of floral meristem identity genes and content of gibberellic acid (GAs) and zeatin riboside (ZR), as well as the ratio of ZR/GAs in buds that were used to produce the second crop, and the ratio of inflorescence induction of the second crop were studied in ‘Summer Black’. The present results showed that floral meristem identity genes of grape and their orthologues in one or more among
Malus domastic
,
Citrus sinensis
,
Theobroma cacao
,
Nicotiana tabacum
,
Solanum lycopersicum
and
Glycine hirsutum
, probably originated from a common ancestor. Interaction networks of six grape-floral meristem identity genes indicated that the inflorescence induction and floral development were regulated by one more complex network, and expression profiles of genes that involved in this network could be affected by each other. Expression profiles of eight floral meristem identity genes were affected by chlormequat chloride and pinching treatments, and higher expression levels of
FT
,
TFL1A
and
TFL1B
, as well as lower expression levels of
LFY
from 3 days before full bloom to 11 days after full bloom were thought to play important roles in promoting the formation of inflorescence primordial of the second crop, and higher expression levels of
CAL A
,
SOC1
and
TFL1A
at 18 days after full bloom (DAF) could promote the development of inflorescence primordial. In addition, lower ratio of ZR/GAs at 3 days before full bloom and 4 days after full bloom could promote the formation of uncommitted lateral meristems in chlormequat chloride and pinching-treated plants, and higher ratio at 11 days after full bloom was the main reason for the formation of more inflorescences after chlormequat chloride treatment.</description><subject>Analysis</subject><subject>Animal Genetics and Genomics</subject><subject>Biomedical and Life Sciences</subject><subject>Chloride</subject><subject>Chlorides</subject><subject>Citrus sinensis</subject><subject>Crop production</subject><subject>Crops</subject><subject>Cytokinins</subject><subject>Evolutionary Biology</subject><subject>Genes</subject><subject>Genetic research</subject><subject>Gibberellic acid</subject><subject>Gibberellins</subject><subject>Glycine max</subject><subject>Gossypium hirsutum</subject><subject>Grapes</subject><subject>Life Sciences</subject><subject>Malus domestica</subject><subject>Meristems</subject><subject>Microbial Genetics and Genomics</subject><subject>Nicotiana tabacum</subject><subject>Phylogeny</subject><subject>Plant Genetics and Genomics</subject><subject>Research Article</subject><subject>Solanum lycopersicum</subject><subject>Theobroma cacao</subject><subject>Vitis vinifera</subject><subject>Wildlife conservation</subject><subject>Zeatin riboside</subject><issn>0022-1333</issn><issn>0973-7731</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>8G5</sourceid><sourceid>BENPR</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNp1ks1u1TAQhSMEoqXwAGyQJTYscPFfruNlVZUfqRIbWFu-yfjiKokvtkPJI_GWjJVCBQIlUmac75zYk9M0zzk754zpN5kLpjhlvKPMCEPbB80pM1pSrSV_iDUTgnIp5UnzJOeb2momHjcnwhgp2E6dNj-uvsVxKSHOLq2vSZgLJNfXnrh5IPD9mCDnrXXjmkMm0RM_xuRGMkEKucBEwgBzCWUlB5ghowvelYHcw9wDdsOymaK4fAGSoY9o36d4rHS5jbTW1NEVXCKH5I5A-mUsS0J4rR952jzybszw7O551nx-e_Xp8j29_vjuw-XFNe2VNIV2SujOKe_bAYTinHtpei20l2I_uF0Hyg2t34uWY6k508btoZdDaxjKdkaeNa8232OKXxfIxU4BjzGOboa4ZCtY2yljlK7oy7_Qm7gknFOlFBdSSM3uqYMbweJgYsERV1N7obnuuOHtDqnzf1B4DTAFHBb4gOt_CPgmwMHlnMDbYwoT_kXLma3xsFs8LMbD1njYFjUv7ja87CcYfit-5QEBsQEZX80HSPcn-r_rT2u5xxs</recordid><startdate>20180601</startdate><enddate>20180601</enddate><creator>Guo, Rongrong</creator><creator>Wang, Bo</creator><creator>Lin, 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floral meristem identity genes in inflorescence induction of the second crop in two-crop-a-year grape culture system</title><author>Guo, Rongrong ; Wang, Bo ; Lin, Ling ; Cheng, Guo ; Zhou, Sihong ; Xie, Shuyu ; Shi, Xiaofang ; Cao, Muming ; Zhang, Ying ; Bai, Xianjin</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c439t-84278a4ff5de24111f39c727f32bda68e4ad5fb2518e471079abec3d5908a4693</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Analysis</topic><topic>Animal Genetics and Genomics</topic><topic>Biomedical and Life Sciences</topic><topic>Chloride</topic><topic>Chlorides</topic><topic>Citrus sinensis</topic><topic>Crop production</topic><topic>Crops</topic><topic>Cytokinins</topic><topic>Evolutionary Biology</topic><topic>Genes</topic><topic>Genetic research</topic><topic>Gibberellic acid</topic><topic>Gibberellins</topic><topic>Glycine max</topic><topic>Gossypium hirsutum</topic><topic>Grapes</topic><topic>Life Sciences</topic><topic>Malus domestica</topic><topic>Meristems</topic><topic>Microbial Genetics and Genomics</topic><topic>Nicotiana tabacum</topic><topic>Phylogeny</topic><topic>Plant Genetics and Genomics</topic><topic>Research Article</topic><topic>Solanum lycopersicum</topic><topic>Theobroma cacao</topic><topic>Vitis vinifera</topic><topic>Wildlife conservation</topic><topic>Zeatin riboside</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Guo, Rongrong</creatorcontrib><creatorcontrib>Wang, Bo</creatorcontrib><creatorcontrib>Lin, Ling</creatorcontrib><creatorcontrib>Cheng, Guo</creatorcontrib><creatorcontrib>Zhou, Sihong</creatorcontrib><creatorcontrib>Xie, Shuyu</creatorcontrib><creatorcontrib>Shi, Xiaofang</creatorcontrib><creatorcontrib>Cao, Muming</creatorcontrib><creatorcontrib>Zhang, Ying</creatorcontrib><creatorcontrib>Bai, Xianjin</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central 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identity genes in inflorescence induction of the second crop in two-crop-a-year grape culture system</atitle><jtitle>Journal of genetics</jtitle><stitle>J Genet</stitle><addtitle>J Genet</addtitle><date>2018-06-01</date><risdate>2018</risdate><volume>97</volume><issue>2</issue><spage>439</spage><epage>451</epage><pages>439-451</pages><issn>0022-1333</issn><eissn>0973-7731</eissn><abstract>The fruitfulness of grapevines (
Vitis vinifera
L.) is determined to a large extent by the differentiation of uncommitted meristems, especially in the second-crop production of some varieties, where the intermediate of inflorescence and tendril accounts for a significant proportion in two-crop-a-year grape culture system. The differentiation of uncommitted lateral meristem was reported to be regulated by a network, whose backbone was composed of several floral meristem identity genes. In the present study, the phylogenetics of grape floral meristem identity genes with their orthologues in other species, and their conserved domain and interaction networks were analysed. In addition, the effects of chlormequat chloride and pinching treatments on the expression profiles of floral meristem identity genes and content of gibberellic acid (GAs) and zeatin riboside (ZR), as well as the ratio of ZR/GAs in buds that were used to produce the second crop, and the ratio of inflorescence induction of the second crop were studied in ‘Summer Black’. The present results showed that floral meristem identity genes of grape and their orthologues in one or more among
Malus domastic
,
Citrus sinensis
,
Theobroma cacao
,
Nicotiana tabacum
,
Solanum lycopersicum
and
Glycine hirsutum
, probably originated from a common ancestor. Interaction networks of six grape-floral meristem identity genes indicated that the inflorescence induction and floral development were regulated by one more complex network, and expression profiles of genes that involved in this network could be affected by each other. Expression profiles of eight floral meristem identity genes were affected by chlormequat chloride and pinching treatments, and higher expression levels of
FT
,
TFL1A
and
TFL1B
, as well as lower expression levels of
LFY
from 3 days before full bloom to 11 days after full bloom were thought to play important roles in promoting the formation of inflorescence primordial of the second crop, and higher expression levels of
CAL A
,
SOC1
and
TFL1A
at 18 days after full bloom (DAF) could promote the development of inflorescence primordial. In addition, lower ratio of ZR/GAs at 3 days before full bloom and 4 days after full bloom could promote the formation of uncommitted lateral meristems in chlormequat chloride and pinching-treated plants, and higher ratio at 11 days after full bloom was the main reason for the formation of more inflorescences after chlormequat chloride treatment.</abstract><cop>New Delhi</cop><pub>Springer India</pub><pmid>29932064</pmid><doi>10.1007/s12041-018-0929-5</doi><tpages>13</tpages></addata></record> |
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source | Indian Academy of Sciences; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; SpringerLink Journals - AutoHoldings |
subjects | Analysis Animal Genetics and Genomics Biomedical and Life Sciences Chloride Chlorides Citrus sinensis Crop production Crops Cytokinins Evolutionary Biology Genes Genetic research Gibberellic acid Gibberellins Glycine max Gossypium hirsutum Grapes Life Sciences Malus domestica Meristems Microbial Genetics and Genomics Nicotiana tabacum Phylogeny Plant Genetics and Genomics Research Article Solanum lycopersicum Theobroma cacao Vitis vinifera Wildlife conservation Zeatin riboside |
title | Evolutionary, interaction and expression analysis of floral meristem identity genes in inflorescence induction of the second crop in two-crop-a-year grape culture system |
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