Breeding to adapt agriculture to climate change: affordable phenotyping solutions
•Affordable approaches are available for all aspects of the phenotyping pipeline.•Affordable and precise high-throughput phenotyping is not incompatible.•RGB imagers allow a wide range of phenotyping applications.•Smartphones may work as affordable and flexible phenotypic platforms.•Open-source appl...
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Veröffentlicht in: | Current opinion in plant biology 2018-10, Vol.45 (Pt B), p.237-247 |
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Hauptverfasser: | , |
Format: | Artikel |
Sprache: | eng |
Online-Zugang: | Volltext |
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Zusammenfassung: | •Affordable approaches are available for all aspects of the phenotyping pipeline.•Affordable and precise high-throughput phenotyping is not incompatible.•RGB imagers allow a wide range of phenotyping applications.•Smartphones may work as affordable and flexible phenotypic platforms.•Open-source applications allow compilation and processing of data via a remotely managed aggregate server.
Breeding is one of the central pillars of adaptation of crops to climate change. However, phenotyping is a key bottleneck that is limiting breeding efficiency. The awareness of phenotyping as a breeding limitation is not only sustained by the lack of adequate approaches, but also by the perception that phenotyping is an expensive activity. Phenotyping is not just dependent on the choice of appropriate traits and tools (e.g. sensors) but relies on how these tools are deployed on their carrying platforms, the speed and volume of data extraction and analysis (throughput), the handling of spatial variability and characterization of environmental conditions, and finally how all the information is integrated and processed. Affordable high throughput phenotyping aims to achieve reasonably priced solutions for all the components comprising the phenotyping pipeline. This mini-review will cover current and imminent solutions for all these components, from the increasing use of conventional digital RGB cameras, within the category of sensors, to open-access cloud-structured data processing and the use of smartphones. Emphasis will be placed on field phenotyping, which is really the main application for day-to-day phenotyping. |
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ISSN: | 1369-5266 1879-0356 |
DOI: | 10.1016/j.pbi.2018.05.003 |