Eight new microsatellite markers in Atlantic cod (Gadus morhua L.) derived from an enriched genomic library

Eight new microsatellite markers in Atlantic cod (Gadus morhua L.) derived from an enriched genomic library

One hundred and fifty random clones from an enriched genomic library of Atlantic cod were sequenced. Primer pairs were designed for 15 microsatellites containing perfect di-, tri-, tetra- and hexanucleotide repeats and characterized in 96 unrelated fish. Eight markers were successfully amplified, wi...

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Veröffentlicht in:Molecular ecology notes 2007, Vol.7 (1), p.138-140
Hauptverfasser: WESMAJERVI, METTE SERINE, TAFESE, TEKLE, STENVIK, JØRGEN, FJALESTAD, KJERSTI TURID, DAMSGÅRD, BØRGE, DELGHANDI, MADJID
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Atlantic cod
enriched genomic library
Gadus morhua
Marine
microsatellites
type II markers
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container_end_page 140
container_issue 1
container_start_page 138
container_title Molecular ecology notes
container_volume 7
creator WESMAJERVI, METTE SERINE
TAFESE, TEKLE
STENVIK, JØRGEN
FJALESTAD, KJERSTI TURID
DAMSGÅRD, BØRGE
DELGHANDI, MADJID
description One hundred and fifty random clones from an enriched genomic library of Atlantic cod were sequenced. Primer pairs were designed for 15 microsatellites containing perfect di-, tri-, tetra- and hexanucleotide repeats and characterized in 96 unrelated fish. Eight markers were successfully amplified, with the number of alleles ranging from two to nine per locus and observed heterozygosity ranging from 0.341 to 0.977. Loci Gmo-G13 and Gmo-G14 had a significant excess of homozygotes. All loci conformed to the Hardy-Weinberg equilibrium. Genetic linkage disequilibrium analysis between all pairs of the loci showed no significant departure from the null hypothesis between any of the loci.
doi_str_mv 10.1111/j.1471-8286.2006.01555.x
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subjects Atlantic cod
enriched genomic library
Gadus morhua
Marine
microsatellites
type II markers
title Eight new microsatellite markers in Atlantic cod (Gadus morhua L.) derived from an enriched genomic library
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