Genetic Analysis Reveals Epidemiologic Patterns in the Spread of Human Immunodeficiency Virus
The extreme variability of human immunodeficiency virus type 1 (HIV-1) makes it possible to conduct transmission studies on the basis of genetic analysis and to trace global and local patterns in the spread of the virus. Two such patterns are discussed in this paper. First, in many European countrie...
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Veröffentlicht in: | American journal of epidemiology 2000-11, Vol.152 (9), p.814-822 |
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description | The extreme variability of human immunodeficiency virus type 1 (HIV-1) makes it possible to conduct transmission studies on the basis of genetic analysis and to trace global and local patterns in the spread of the virus. Two such patterns are discussed in this paper. First, in many European countries (e.g., Scotland and Germany), homosexual men tend to be infected with a subtly different variant of HIV-1 than intravenous drug users. In other European countries (e.g., Norway and Sweden), a distinction is also found between the two risk groups; but based on available data, the distinction is a different one. The second pattern is a worldwide tendency for homosexual men in many different geographic regions around the world to carry HIV-1 subtype B, the variant that is most prevalent in the Americas, Europe, and Australia. In contrast, people infected via other routes (mostly heterosexual contact) in those same countries carry a mixture of other subtypes. Biologic differences between the viruses infecting different risk groups have not been found; the most likely explanation for the findings is different epidemiologic patterns. Although data are still scarce, the authors attempt to use these patterns in the reconstruction of the worldwide spread of the HIV epidemic. Am J Epidemiol 2000;152:814–22. |
doi_str_mv | 10.1093/aje/152.9.814 |
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Two such patterns are discussed in this paper. First, in many European countries (e.g., Scotland and Germany), homosexual men tend to be infected with a subtly different variant of HIV-1 than intravenous drug users. In other European countries (e.g., Norway and Sweden), a distinction is also found between the two risk groups; but based on available data, the distinction is a different one. The second pattern is a worldwide tendency for homosexual men in many different geographic regions around the world to carry HIV-1 subtype B, the variant that is most prevalent in the Americas, Europe, and Australia. In contrast, people infected via other routes (mostly heterosexual contact) in those same countries carry a mixture of other subtypes. Biologic differences between the viruses infecting different risk groups have not been found; the most likely explanation for the findings is different epidemiologic patterns. Although data are still scarce, the authors attempt to use these patterns in the reconstruction of the worldwide spread of the HIV epidemic. Am J Epidemiol 2000;152:814–22.</description><identifier>ISSN: 0002-9262</identifier><identifier>EISSN: 1476-6256</identifier><identifier>EISSN: 0002-9262</identifier><identifier>DOI: 10.1093/aje/152.9.814</identifier><identifier>PMID: 11085392</identifier><identifier>CODEN: AJEPAS</identifier><language>eng</language><publisher>Cary, NC: Oxford University Press</publisher><subject>Biological and medical sciences ; disease transmission ; Europe ; genetic heterogeneity ; genetics ; Genome, Viral ; HIV ; HIV Infections - genetics ; HIV Infections - transmission ; HIV-1 - genetics ; Homosexuality, Male ; human immunodeficiency virus ; Human immunodeficiency virus 1 ; Human viral diseases ; Humans ; IDU ; Infectious diseases ; intravenous drug user ; Male ; Medical sciences ; Phylogeny ; simian immunodeficiency virus ; SIV ; Substance Abuse, Intravenous ; third variable region of the envelope gene ; Viral diseases ; Viral diseases of the lymphoid tissue and the blood. Aids ; viruses</subject><ispartof>American journal of epidemiology, 2000-11, Vol.152 (9), p.814-822</ispartof><rights>2001 INIST-CNRS</rights><rights>Copyright Oxford University Press(England) Nov 01, 2000</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c452t-ce79890eca20402650eefa24e98f9ed772c2e9e29ad3a770f2174093ef4d3143</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=791210$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/11085392$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kuiken, Carla</creatorcontrib><creatorcontrib>Thakallapalli, Rama</creatorcontrib><creatorcontrib>Eskild, Anne</creatorcontrib><creatorcontrib>de Ronde, Anthony</creatorcontrib><title>Genetic Analysis Reveals Epidemiologic Patterns in the Spread of Human Immunodeficiency Virus</title><title>American journal of epidemiology</title><addtitle>Am. J. Epidemiol</addtitle><description>The extreme variability of human immunodeficiency virus type 1 (HIV-1) makes it possible to conduct transmission studies on the basis of genetic analysis and to trace global and local patterns in the spread of the virus. Two such patterns are discussed in this paper. First, in many European countries (e.g., Scotland and Germany), homosexual men tend to be infected with a subtly different variant of HIV-1 than intravenous drug users. In other European countries (e.g., Norway and Sweden), a distinction is also found between the two risk groups; but based on available data, the distinction is a different one. The second pattern is a worldwide tendency for homosexual men in many different geographic regions around the world to carry HIV-1 subtype B, the variant that is most prevalent in the Americas, Europe, and Australia. In contrast, people infected via other routes (mostly heterosexual contact) in those same countries carry a mixture of other subtypes. Biologic differences between the viruses infecting different risk groups have not been found; the most likely explanation for the findings is different epidemiologic patterns. Although data are still scarce, the authors attempt to use these patterns in the reconstruction of the worldwide spread of the HIV epidemic. Am J Epidemiol 2000;152:814–22.</description><subject>Biological and medical sciences</subject><subject>disease transmission</subject><subject>Europe</subject><subject>genetic heterogeneity</subject><subject>genetics</subject><subject>Genome, Viral</subject><subject>HIV</subject><subject>HIV Infections - genetics</subject><subject>HIV Infections - transmission</subject><subject>HIV-1 - genetics</subject><subject>Homosexuality, Male</subject><subject>human immunodeficiency virus</subject><subject>Human immunodeficiency virus 1</subject><subject>Human viral diseases</subject><subject>Humans</subject><subject>IDU</subject><subject>Infectious diseases</subject><subject>intravenous drug user</subject><subject>Male</subject><subject>Medical sciences</subject><subject>Phylogeny</subject><subject>simian immunodeficiency virus</subject><subject>SIV</subject><subject>Substance Abuse, Intravenous</subject><subject>third variable region of the envelope gene</subject><subject>Viral diseases</subject><subject>Viral diseases of the lymphoid tissue and the blood. Aids</subject><subject>viruses</subject><issn>0002-9262</issn><issn>1476-6256</issn><issn>0002-9262</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2000</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpdkFFrFDEUhYModq0--ipBoW-zTW4mk8ljKXW3UlB0ESlIiJkbzTqT2SYzxf33pnZpwaf7cD6-wz2EvOZsyZkWp3aLp1zCUi9bXj8hC16rpmpANk_JgjEGlYYGjsiLnLeMca4le06OOGetFBoW5PsKI07B0bNo-30OmX7GW7R9phe70OEQxn78WeJPdpowxUxDpNMvpF92CW1HR0_X82AjvRyGOY4d-uACRrenX0Oa80vyzBcXvjrcY7J5f7E5X1dXH1eX52dXlaslTJVDpVvN0FlgNYNGMkRvoUbdeo2dUuAANYK2nbBKMQ9c1eV59HUneC2Oycm9dpfGmxnzZIaQHfa9jTjO2RSraIS8A9_-B27HOZXPCyOkBsGgLVB1D7k05pzQm10Kg017w5m529yUzU3Z3GjT_mt_c5DOPwbsHunDyAV4dwBsdrb3yUYX8gOnNAfOHmtDnvDPQ2rTb9MooaRZf7s21x82pRJWRoq_7_6X6A</recordid><startdate>20001101</startdate><enddate>20001101</enddate><creator>Kuiken, Carla</creator><creator>Thakallapalli, Rama</creator><creator>Eskild, Anne</creator><creator>de Ronde, Anthony</creator><general>Oxford University Press</general><general>Oxford Publishing Limited (England)</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QP</scope><scope>7T2</scope><scope>7TK</scope><scope>7U7</scope><scope>7U9</scope><scope>C1K</scope><scope>H94</scope><scope>K9.</scope><scope>NAPCQ</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20001101</creationdate><title>Genetic Analysis Reveals Epidemiologic Patterns in the Spread of Human Immunodeficiency Virus</title><author>Kuiken, Carla ; Thakallapalli, Rama ; Eskild, Anne ; de Ronde, Anthony</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c452t-ce79890eca20402650eefa24e98f9ed772c2e9e29ad3a770f2174093ef4d3143</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2000</creationdate><topic>Biological and medical sciences</topic><topic>disease transmission</topic><topic>Europe</topic><topic>genetic heterogeneity</topic><topic>genetics</topic><topic>Genome, Viral</topic><topic>HIV</topic><topic>HIV Infections - genetics</topic><topic>HIV Infections - transmission</topic><topic>HIV-1 - genetics</topic><topic>Homosexuality, Male</topic><topic>human immunodeficiency virus</topic><topic>Human immunodeficiency virus 1</topic><topic>Human viral diseases</topic><topic>Humans</topic><topic>IDU</topic><topic>Infectious diseases</topic><topic>intravenous drug user</topic><topic>Male</topic><topic>Medical sciences</topic><topic>Phylogeny</topic><topic>simian immunodeficiency virus</topic><topic>SIV</topic><topic>Substance Abuse, Intravenous</topic><topic>third variable region of the envelope gene</topic><topic>Viral diseases</topic><topic>Viral diseases of the lymphoid tissue and the blood. Aids</topic><topic>viruses</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kuiken, Carla</creatorcontrib><creatorcontrib>Thakallapalli, Rama</creatorcontrib><creatorcontrib>Eskild, Anne</creatorcontrib><creatorcontrib>de Ronde, Anthony</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Health and Safety Science Abstracts (Full archive)</collection><collection>Neurosciences Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Nursing & Allied Health Premium</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>American journal of epidemiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kuiken, Carla</au><au>Thakallapalli, Rama</au><au>Eskild, Anne</au><au>de Ronde, Anthony</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic Analysis Reveals Epidemiologic Patterns in the Spread of Human Immunodeficiency Virus</atitle><jtitle>American journal of epidemiology</jtitle><addtitle>Am. J. Epidemiol</addtitle><date>2000-11-01</date><risdate>2000</risdate><volume>152</volume><issue>9</issue><spage>814</spage><epage>822</epage><pages>814-822</pages><issn>0002-9262</issn><eissn>1476-6256</eissn><eissn>0002-9262</eissn><coden>AJEPAS</coden><abstract>The extreme variability of human immunodeficiency virus type 1 (HIV-1) makes it possible to conduct transmission studies on the basis of genetic analysis and to trace global and local patterns in the spread of the virus. Two such patterns are discussed in this paper. First, in many European countries (e.g., Scotland and Germany), homosexual men tend to be infected with a subtly different variant of HIV-1 than intravenous drug users. In other European countries (e.g., Norway and Sweden), a distinction is also found between the two risk groups; but based on available data, the distinction is a different one. The second pattern is a worldwide tendency for homosexual men in many different geographic regions around the world to carry HIV-1 subtype B, the variant that is most prevalent in the Americas, Europe, and Australia. In contrast, people infected via other routes (mostly heterosexual contact) in those same countries carry a mixture of other subtypes. Biologic differences between the viruses infecting different risk groups have not been found; the most likely explanation for the findings is different epidemiologic patterns. Although data are still scarce, the authors attempt to use these patterns in the reconstruction of the worldwide spread of the HIV epidemic. Am J Epidemiol 2000;152:814–22.</abstract><cop>Cary, NC</cop><pub>Oxford University Press</pub><pmid>11085392</pmid><doi>10.1093/aje/152.9.814</doi><tpages>9</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Biological and medical sciences disease transmission Europe genetic heterogeneity genetics Genome, Viral HIV HIV Infections - genetics HIV Infections - transmission HIV-1 - genetics Homosexuality, Male human immunodeficiency virus Human immunodeficiency virus 1 Human viral diseases Humans IDU Infectious diseases intravenous drug user Male Medical sciences Phylogeny simian immunodeficiency virus SIV Substance Abuse, Intravenous third variable region of the envelope gene Viral diseases Viral diseases of the lymphoid tissue and the blood. Aids viruses |
title | Genetic Analysis Reveals Epidemiologic Patterns in the Spread of Human Immunodeficiency Virus |
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