Molecular characterization and expression analysis of TLR1 and TLR4 from the endangered fish Dabry's sturgeon (Acipenser dabryanus)
Toll-like receptors (TLRs) are important pattern recognition receptors (PRRs) of teleost innate immune system. However, information about TLRs is absent in Dabry's sturgeon (Acipenser dabryanus), one of the most primitive actinopterygii species. In the present study, the full lengths of adaTLR1...
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Veröffentlicht in: | Developmental and comparative immunology 2018-09, Vol.86, p.180-188 |
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description | Toll-like receptors (TLRs) are important pattern recognition receptors (PRRs) of teleost innate immune system. However, information about TLRs is absent in Dabry's sturgeon (Acipenser dabryanus), one of the most primitive actinopterygii species. In the present study, the full lengths of adaTLR1 and adaTLR4 were cloned from Dabry's sturgeon using RT-PCR and RACE-PCR. The obtained adaTLR1 was 2957 bp in length, encoding a putative protein of 767 amino acids and adaTLR4 cDNA was 2902 bp in length, encoding a putative protein of 830 aa. Both adaTLR1 and adaTLR4 possessed several typical TLRs motifs, including signal peptides, leucine-rich repeat (LRR) motifs, a transmembrane domain and a TIR motifs. In addition, adaTLR4 contained three conserved boxes in its TIR motif, involving in TLRs signal transduction. A proline, important for LPS recognition of mammalian TLR4, was also found in adaTLR4. Physicochemical features of adaTLR1 and adaTRL4 were also analyzed. Quantitative realtime PCR showed that both transcripts were ubiquitously expressed in all 11 normal tissues selected, but they exhibited different expression patterns, with adaTLR1 highly expression in heart and adaTLR4 highly in skin. Further, adaTLR1 and adaTLR4 were up-regulated in the primary head-kidney leucocytes following LPS and polyI:C stimulation, indicating that both genes involved in the sturgeon immune response to LPS and polyI:C. To our best knowledge, this was the first report of these genes in sturgeon and these results provided the basis for further elucidating the ligand specificity and signaling pathway of fish TLRs.
•TLR1 and TLR4 were firstly identified from the endangered fish Dabry's sturgeon (Acipenser dabryanus).•Sequence features of adaTLR1 and adaTLR4 were analyzed.•Expression patterns of adaTLR1 and adaTLR4 in normal tissues of sturgeon were analyzed.•Expression patterns of adaTLR1 and adaTLR4 in the primary HK leucocytes following PAMPs stimulation were analyzed. |
doi_str_mv | 10.1016/j.dci.2018.05.009 |
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•TLR1 and TLR4 were firstly identified from the endangered fish Dabry's sturgeon (Acipenser dabryanus).•Sequence features of adaTLR1 and adaTLR4 were analyzed.•Expression patterns of adaTLR1 and adaTLR4 in normal tissues of sturgeon were analyzed.•Expression patterns of adaTLR1 and adaTLR4 in the primary HK leucocytes following PAMPs stimulation were analyzed.</description><identifier>ISSN: 0145-305X</identifier><identifier>EISSN: 1879-0089</identifier><identifier>DOI: 10.1016/j.dci.2018.05.009</identifier><identifier>PMID: 29753770</identifier><language>eng</language><publisher>United States: Elsevier Ltd</publisher><subject>Acipenser dabryanus ; Amino acids ; Coding ; Fish ; Gene expression ; Genes ; Immune response ; Immune system ; Immunity ; Immunology ; Information systems ; Innate immunity ; Leucine ; Leukocytes ; Lipopolysaccharides ; Pattern recognition ; Pattern recognition receptors ; Peptides ; Polyinosinic:polycytidylic acid ; Polymerase chain reaction ; Proline ; Proteins ; Receptors ; Signal peptides ; Signal transduction ; Skin ; Sturgeon ; TLR1 ; TLR1 protein ; TLR4 ; TLR4 protein ; Toll-like receptors</subject><ispartof>Developmental and comparative immunology, 2018-09, Vol.86, p.180-188</ispartof><rights>2018 Elsevier Ltd</rights><rights>Copyright © 2018 Elsevier Ltd. All rights reserved.</rights><rights>Copyright Elsevier Science Ltd. Sep 2018</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c381t-6f607d6056955b92c4b8f916a7787038113dd5f73b165a9ab49624825e8196973</citedby><cites>FETCH-LOGICAL-c381t-6f607d6056955b92c4b8f916a7787038113dd5f73b165a9ab49624825e8196973</cites><orcidid>0000-0002-2249-9522</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.dci.2018.05.009$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3549,27923,27924,45994</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29753770$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Han, Panpan</creatorcontrib><creatorcontrib>Wang, Sisi</creatorcontrib><creatorcontrib>Zhang, Qihuan</creatorcontrib><creatorcontrib>Zhang, Shuhuan</creatorcontrib><creatorcontrib>Shao, Rong</creatorcontrib><creatorcontrib>Xu, Wei</creatorcontrib><creatorcontrib>Zhang, Wenbing</creatorcontrib><creatorcontrib>Xu, Qiaoqing</creatorcontrib><creatorcontrib>Wei, Qiwei</creatorcontrib><creatorcontrib>Qi, Zhitao</creatorcontrib><title>Molecular characterization and expression analysis of TLR1 and TLR4 from the endangered fish Dabry's sturgeon (Acipenser dabryanus)</title><title>Developmental and comparative immunology</title><addtitle>Dev Comp Immunol</addtitle><description>Toll-like receptors (TLRs) are important pattern recognition receptors (PRRs) of teleost innate immune system. However, information about TLRs is absent in Dabry's sturgeon (Acipenser dabryanus), one of the most primitive actinopterygii species. In the present study, the full lengths of adaTLR1 and adaTLR4 were cloned from Dabry's sturgeon using RT-PCR and RACE-PCR. The obtained adaTLR1 was 2957 bp in length, encoding a putative protein of 767 amino acids and adaTLR4 cDNA was 2902 bp in length, encoding a putative protein of 830 aa. Both adaTLR1 and adaTLR4 possessed several typical TLRs motifs, including signal peptides, leucine-rich repeat (LRR) motifs, a transmembrane domain and a TIR motifs. In addition, adaTLR4 contained three conserved boxes in its TIR motif, involving in TLRs signal transduction. A proline, important for LPS recognition of mammalian TLR4, was also found in adaTLR4. Physicochemical features of adaTLR1 and adaTRL4 were also analyzed. Quantitative realtime PCR showed that both transcripts were ubiquitously expressed in all 11 normal tissues selected, but they exhibited different expression patterns, with adaTLR1 highly expression in heart and adaTLR4 highly in skin. Further, adaTLR1 and adaTLR4 were up-regulated in the primary head-kidney leucocytes following LPS and polyI:C stimulation, indicating that both genes involved in the sturgeon immune response to LPS and polyI:C. To our best knowledge, this was the first report of these genes in sturgeon and these results provided the basis for further elucidating the ligand specificity and signaling pathway of fish TLRs.
•TLR1 and TLR4 were firstly identified from the endangered fish Dabry's sturgeon (Acipenser dabryanus).•Sequence features of adaTLR1 and adaTLR4 were analyzed.•Expression patterns of adaTLR1 and adaTLR4 in normal tissues of sturgeon were analyzed.•Expression patterns of adaTLR1 and adaTLR4 in the primary HK leucocytes following PAMPs stimulation were analyzed.</description><subject>Acipenser dabryanus</subject><subject>Amino acids</subject><subject>Coding</subject><subject>Fish</subject><subject>Gene expression</subject><subject>Genes</subject><subject>Immune response</subject><subject>Immune system</subject><subject>Immunity</subject><subject>Immunology</subject><subject>Information systems</subject><subject>Innate immunity</subject><subject>Leucine</subject><subject>Leukocytes</subject><subject>Lipopolysaccharides</subject><subject>Pattern recognition</subject><subject>Pattern recognition receptors</subject><subject>Peptides</subject><subject>Polyinosinic:polycytidylic acid</subject><subject>Polymerase chain reaction</subject><subject>Proline</subject><subject>Proteins</subject><subject>Receptors</subject><subject>Signal peptides</subject><subject>Signal transduction</subject><subject>Skin</subject><subject>Sturgeon</subject><subject>TLR1</subject><subject>TLR1 protein</subject><subject>TLR4</subject><subject>TLR4 protein</subject><subject>Toll-like receptors</subject><issn>0145-305X</issn><issn>1879-0089</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNp9kU1v1DAQhi1ERbeFH8AFWeJAe0gYJ_GXOFUtBaRFSKhI3CzHnnS9yiZbO0Es1_5xvN3CgQNz8VjzzHOYl5CXDEoGTLxdl96FsgKmSuAlgH5CFkxJXQAo_ZQsgDW8qIF_PyYnKa0hl2LwjBxXWvJaSliQ-89jj27ubaRuZaN1E8bwy05hHKgdPMWf24gpHb6236WQ6NjRm-VX9jDPTUO7OG7otEKKg7fDLUb0tAtpRa9sG3dvEk3THG8xO84uXNjikDBSv5_ZYU7nz8lRZ_uELx7fU_Lt-v3N5cdi-eXDp8uLZeFqxaZCdAKkF8CF5rzVlWta1WkmrJRKQkZY7T3vZN0ywa22baNF1aiKo2JaaFmfkrODdxvHuxnTZDYhOex7O-A4J1NliQSoH9DX_6DrcY75AHtKV0pD9maKHSgXx5QidmYbw8bGnWFg9gmZtckJmX1CBrjJCeWdV4_mud2g_7vxJ5IMvDsAmE_xI2A0yQUcHPoQ0U3Gj-E_-t_ftJ_D</recordid><startdate>20180901</startdate><enddate>20180901</enddate><creator>Han, Panpan</creator><creator>Wang, Sisi</creator><creator>Zhang, Qihuan</creator><creator>Zhang, Shuhuan</creator><creator>Shao, Rong</creator><creator>Xu, Wei</creator><creator>Zhang, Wenbing</creator><creator>Xu, Qiaoqing</creator><creator>Wei, Qiwei</creator><creator>Qi, Zhitao</creator><general>Elsevier Ltd</general><general>Elsevier Science Ltd</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7T5</scope><scope>C1K</scope><scope>H94</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-2249-9522</orcidid></search><sort><creationdate>20180901</creationdate><title>Molecular characterization and expression analysis of TLR1 and TLR4 from the endangered fish Dabry's sturgeon (Acipenser dabryanus)</title><author>Han, Panpan ; Wang, Sisi ; Zhang, Qihuan ; Zhang, Shuhuan ; Shao, Rong ; Xu, Wei ; Zhang, Wenbing ; Xu, Qiaoqing ; Wei, Qiwei ; Qi, Zhitao</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c381t-6f607d6056955b92c4b8f916a7787038113dd5f73b165a9ab49624825e8196973</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Acipenser dabryanus</topic><topic>Amino acids</topic><topic>Coding</topic><topic>Fish</topic><topic>Gene expression</topic><topic>Genes</topic><topic>Immune response</topic><topic>Immune system</topic><topic>Immunity</topic><topic>Immunology</topic><topic>Information systems</topic><topic>Innate immunity</topic><topic>Leucine</topic><topic>Leukocytes</topic><topic>Lipopolysaccharides</topic><topic>Pattern recognition</topic><topic>Pattern recognition receptors</topic><topic>Peptides</topic><topic>Polyinosinic:polycytidylic acid</topic><topic>Polymerase chain reaction</topic><topic>Proline</topic><topic>Proteins</topic><topic>Receptors</topic><topic>Signal peptides</topic><topic>Signal transduction</topic><topic>Skin</topic><topic>Sturgeon</topic><topic>TLR1</topic><topic>TLR1 protein</topic><topic>TLR4</topic><topic>TLR4 protein</topic><topic>Toll-like receptors</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Han, Panpan</creatorcontrib><creatorcontrib>Wang, Sisi</creatorcontrib><creatorcontrib>Zhang, Qihuan</creatorcontrib><creatorcontrib>Zhang, Shuhuan</creatorcontrib><creatorcontrib>Shao, Rong</creatorcontrib><creatorcontrib>Xu, Wei</creatorcontrib><creatorcontrib>Zhang, Wenbing</creatorcontrib><creatorcontrib>Xu, Qiaoqing</creatorcontrib><creatorcontrib>Wei, Qiwei</creatorcontrib><creatorcontrib>Qi, Zhitao</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Immunology Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Developmental and comparative immunology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Han, Panpan</au><au>Wang, Sisi</au><au>Zhang, Qihuan</au><au>Zhang, Shuhuan</au><au>Shao, Rong</au><au>Xu, Wei</au><au>Zhang, Wenbing</au><au>Xu, Qiaoqing</au><au>Wei, Qiwei</au><au>Qi, Zhitao</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular characterization and expression analysis of TLR1 and TLR4 from the endangered fish Dabry's sturgeon (Acipenser dabryanus)</atitle><jtitle>Developmental and comparative immunology</jtitle><addtitle>Dev Comp Immunol</addtitle><date>2018-09-01</date><risdate>2018</risdate><volume>86</volume><spage>180</spage><epage>188</epage><pages>180-188</pages><issn>0145-305X</issn><eissn>1879-0089</eissn><abstract>Toll-like receptors (TLRs) are important pattern recognition receptors (PRRs) of teleost innate immune system. However, information about TLRs is absent in Dabry's sturgeon (Acipenser dabryanus), one of the most primitive actinopterygii species. In the present study, the full lengths of adaTLR1 and adaTLR4 were cloned from Dabry's sturgeon using RT-PCR and RACE-PCR. The obtained adaTLR1 was 2957 bp in length, encoding a putative protein of 767 amino acids and adaTLR4 cDNA was 2902 bp in length, encoding a putative protein of 830 aa. Both adaTLR1 and adaTLR4 possessed several typical TLRs motifs, including signal peptides, leucine-rich repeat (LRR) motifs, a transmembrane domain and a TIR motifs. In addition, adaTLR4 contained three conserved boxes in its TIR motif, involving in TLRs signal transduction. A proline, important for LPS recognition of mammalian TLR4, was also found in adaTLR4. Physicochemical features of adaTLR1 and adaTRL4 were also analyzed. Quantitative realtime PCR showed that both transcripts were ubiquitously expressed in all 11 normal tissues selected, but they exhibited different expression patterns, with adaTLR1 highly expression in heart and adaTLR4 highly in skin. Further, adaTLR1 and adaTLR4 were up-regulated in the primary head-kidney leucocytes following LPS and polyI:C stimulation, indicating that both genes involved in the sturgeon immune response to LPS and polyI:C. To our best knowledge, this was the first report of these genes in sturgeon and these results provided the basis for further elucidating the ligand specificity and signaling pathway of fish TLRs.
•TLR1 and TLR4 were firstly identified from the endangered fish Dabry's sturgeon (Acipenser dabryanus).•Sequence features of adaTLR1 and adaTLR4 were analyzed.•Expression patterns of adaTLR1 and adaTLR4 in normal tissues of sturgeon were analyzed.•Expression patterns of adaTLR1 and adaTLR4 in the primary HK leucocytes following PAMPs stimulation were analyzed.</abstract><cop>United States</cop><pub>Elsevier Ltd</pub><pmid>29753770</pmid><doi>10.1016/j.dci.2018.05.009</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0002-2249-9522</orcidid></addata></record> |
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subjects | Acipenser dabryanus Amino acids Coding Fish Gene expression Genes Immune response Immune system Immunity Immunology Information systems Innate immunity Leucine Leukocytes Lipopolysaccharides Pattern recognition Pattern recognition receptors Peptides Polyinosinic:polycytidylic acid Polymerase chain reaction Proline Proteins Receptors Signal peptides Signal transduction Skin Sturgeon TLR1 TLR1 protein TLR4 TLR4 protein Toll-like receptors |
title | Molecular characterization and expression analysis of TLR1 and TLR4 from the endangered fish Dabry's sturgeon (Acipenser dabryanus) |
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