Phylogenetic Analyses of Timmiaceae (Bryophyta: Musci) Based on Nuclear and Chloroplast Sequence Data
Nuclear ribosomal (26S) and chloroplast (trnL-trnF and atpB-rbcL spacer) genomic regions were sequenced from 29 exemplars of Timmiaceae and five outgroup taxa. Phylogenetic hypotheses were tested from analyses of the individual regions and a combined dataset, using both parsimony and Bayesian infere...
Gespeichert in:
Veröffentlicht in: | Systematic botany 2006-10, Vol.31 (4), p.633-641 |
---|---|
Hauptverfasser: | , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 641 |
---|---|
container_issue | 4 |
container_start_page | 633 |
container_title | Systematic botany |
container_volume | 31 |
creator | Budke, J M Goffinet, B |
description | Nuclear ribosomal (26S) and chloroplast (trnL-trnF and atpB-rbcL spacer) genomic regions were sequenced from 29 exemplars of Timmiaceae and five outgroup taxa. Phylogenetic hypotheses were tested from analyses of the individual regions and a combined dataset, using both parsimony and Bayesian inference methods. Estimates of branch support were established using bootstrap analyses and Bayesian posterior probabilities. The analyses were used to test the monophyly of the species and the relationships among taxa in Timmiaceae, previously based on morphology. Phylogenetic inferences suggest that Timmia austriaca, T. megapolitana s.s., T. megapolitana subsp. bavarica, and section Norvegica represent monophyletic taxa. Timmia norvegica s.s., T. norvegica var. excurrens, and T. sibirica were non-monophyletic, but together form a single clade. We, therefore, recommend recognizing them as a single taxon, T. norvegica. A key to the taxa is presented. |
doi_str_mv | 10.1600/0363-6445(2006)31[633:PAOTBM]2.0.CO;2 |
format | Article |
fullrecord | <record><control><sourceid>proquest</sourceid><recordid>TN_cdi_proquest_miscellaneous_20347924</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>20347924</sourcerecordid><originalsourceid>FETCH-proquest_miscellaneous_203479243</originalsourceid><addsrcrecordid>eNqNyj1PwzAQAFAPIFE-_sNNqB0SLnEwapmaAGIprUQ2hKqTeyVBjh1yzpB_DwNiZnrLUyrJMM0M4g1qoxNTFLfzHNEsdPZmtF7t1tu63LznKabV9j4_UbO_d6bORT4RcWkwmyneNZMLH-w5thbWntwkLBCOULdd15JlYpiXwxT6Zoq0gs0otl1AScIHCB5eRuuYBiB_gKpxYQi9I4nwyl8je8vwQJEu1emRnPDVrxfq-umxrp6Tfgg_TeK-a8Wyc-Q5jLLPURd3y7zQ_47fJCxSng</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>20347924</pqid></control><display><type>article</type><title>Phylogenetic Analyses of Timmiaceae (Bryophyta: Musci) Based on Nuclear and Chloroplast Sequence Data</title><source>BioOne Complete</source><source>Jstor Complete Legacy</source><creator>Budke, J M ; Goffinet, B</creator><creatorcontrib>Budke, J M ; Goffinet, B</creatorcontrib><description>Nuclear ribosomal (26S) and chloroplast (trnL-trnF and atpB-rbcL spacer) genomic regions were sequenced from 29 exemplars of Timmiaceae and five outgroup taxa. Phylogenetic hypotheses were tested from analyses of the individual regions and a combined dataset, using both parsimony and Bayesian inference methods. Estimates of branch support were established using bootstrap analyses and Bayesian posterior probabilities. The analyses were used to test the monophyly of the species and the relationships among taxa in Timmiaceae, previously based on morphology. Phylogenetic inferences suggest that Timmia austriaca, T. megapolitana s.s., T. megapolitana subsp. bavarica, and section Norvegica represent monophyletic taxa. Timmia norvegica s.s., T. norvegica var. excurrens, and T. sibirica were non-monophyletic, but together form a single clade. We, therefore, recommend recognizing them as a single taxon, T. norvegica. A key to the taxa is presented.</description><identifier>ISSN: 0363-6445</identifier><identifier>DOI: 10.1600/0363-6445(2006)31[633:PAOTBM]2.0.CO;2</identifier><language>eng</language><subject>Bryophyta ; Musci ; Timmia austriaca ; Timmia norvegica ; Timmiaceae</subject><ispartof>Systematic botany, 2006-10, Vol.31 (4), p.633-641</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,778,782,27907,27908</link.rule.ids></links><search><creatorcontrib>Budke, J M</creatorcontrib><creatorcontrib>Goffinet, B</creatorcontrib><title>Phylogenetic Analyses of Timmiaceae (Bryophyta: Musci) Based on Nuclear and Chloroplast Sequence Data</title><title>Systematic botany</title><description>Nuclear ribosomal (26S) and chloroplast (trnL-trnF and atpB-rbcL spacer) genomic regions were sequenced from 29 exemplars of Timmiaceae and five outgroup taxa. Phylogenetic hypotheses were tested from analyses of the individual regions and a combined dataset, using both parsimony and Bayesian inference methods. Estimates of branch support were established using bootstrap analyses and Bayesian posterior probabilities. The analyses were used to test the monophyly of the species and the relationships among taxa in Timmiaceae, previously based on morphology. Phylogenetic inferences suggest that Timmia austriaca, T. megapolitana s.s., T. megapolitana subsp. bavarica, and section Norvegica represent monophyletic taxa. Timmia norvegica s.s., T. norvegica var. excurrens, and T. sibirica were non-monophyletic, but together form a single clade. We, therefore, recommend recognizing them as a single taxon, T. norvegica. A key to the taxa is presented.</description><subject>Bryophyta</subject><subject>Musci</subject><subject>Timmia austriaca</subject><subject>Timmia norvegica</subject><subject>Timmiaceae</subject><issn>0363-6445</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><recordid>eNqNyj1PwzAQAFAPIFE-_sNNqB0SLnEwapmaAGIprUQ2hKqTeyVBjh1yzpB_DwNiZnrLUyrJMM0M4g1qoxNTFLfzHNEsdPZmtF7t1tu63LznKabV9j4_UbO_d6bORT4RcWkwmyneNZMLH-w5thbWntwkLBCOULdd15JlYpiXwxT6Zoq0gs0otl1AScIHCB5eRuuYBiB_gKpxYQi9I4nwyl8je8vwQJEu1emRnPDVrxfq-umxrp6Tfgg_TeK-a8Wyc-Q5jLLPURd3y7zQ_47fJCxSng</recordid><startdate>20061001</startdate><enddate>20061001</enddate><creator>Budke, J M</creator><creator>Goffinet, B</creator><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20061001</creationdate><title>Phylogenetic Analyses of Timmiaceae (Bryophyta: Musci) Based on Nuclear and Chloroplast Sequence Data</title><author>Budke, J M ; Goffinet, B</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-proquest_miscellaneous_203479243</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Bryophyta</topic><topic>Musci</topic><topic>Timmia austriaca</topic><topic>Timmia norvegica</topic><topic>Timmiaceae</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Budke, J M</creatorcontrib><creatorcontrib>Goffinet, B</creatorcontrib><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Systematic botany</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Budke, J M</au><au>Goffinet, B</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Phylogenetic Analyses of Timmiaceae (Bryophyta: Musci) Based on Nuclear and Chloroplast Sequence Data</atitle><jtitle>Systematic botany</jtitle><date>2006-10-01</date><risdate>2006</risdate><volume>31</volume><issue>4</issue><spage>633</spage><epage>641</epage><pages>633-641</pages><issn>0363-6445</issn><abstract>Nuclear ribosomal (26S) and chloroplast (trnL-trnF and atpB-rbcL spacer) genomic regions were sequenced from 29 exemplars of Timmiaceae and five outgroup taxa. Phylogenetic hypotheses were tested from analyses of the individual regions and a combined dataset, using both parsimony and Bayesian inference methods. Estimates of branch support were established using bootstrap analyses and Bayesian posterior probabilities. The analyses were used to test the monophyly of the species and the relationships among taxa in Timmiaceae, previously based on morphology. Phylogenetic inferences suggest that Timmia austriaca, T. megapolitana s.s., T. megapolitana subsp. bavarica, and section Norvegica represent monophyletic taxa. Timmia norvegica s.s., T. norvegica var. excurrens, and T. sibirica were non-monophyletic, but together form a single clade. We, therefore, recommend recognizing them as a single taxon, T. norvegica. A key to the taxa is presented.</abstract><doi>10.1600/0363-6445(2006)31[633:PAOTBM]2.0.CO;2</doi></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0363-6445 |
ispartof | Systematic botany, 2006-10, Vol.31 (4), p.633-641 |
issn | 0363-6445 |
language | eng |
recordid | cdi_proquest_miscellaneous_20347924 |
source | BioOne Complete; Jstor Complete Legacy |
subjects | Bryophyta Musci Timmia austriaca Timmia norvegica Timmiaceae |
title | Phylogenetic Analyses of Timmiaceae (Bryophyta: Musci) Based on Nuclear and Chloroplast Sequence Data |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-16T12%3A27%3A47IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Phylogenetic%20Analyses%20of%20Timmiaceae%20(Bryophyta:%20Musci)%20Based%20on%20Nuclear%20and%20Chloroplast%20Sequence%20Data&rft.jtitle=Systematic%20botany&rft.au=Budke,%20J%20M&rft.date=2006-10-01&rft.volume=31&rft.issue=4&rft.spage=633&rft.epage=641&rft.pages=633-641&rft.issn=0363-6445&rft_id=info:doi/10.1600/0363-6445(2006)31%5B633:PAOTBM%5D2.0.CO;2&rft_dat=%3Cproquest%3E20347924%3C/proquest%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=20347924&rft_id=info:pmid/&rfr_iscdi=true |