Radiomics-based features for pattern recognition of lung cancer histopathology and metastases
•Shape features presented greatest potential on nodal metastasis pattern recognition.•Gray-level cooccurrence matrix texture features presented greatest potential on distant metastasis and histopathological pattern recognition.•Our radiomics model may provide additional information for therapy decis...
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Veröffentlicht in: | Computer methods and programs in biomedicine 2018-06, Vol.159, p.23-30 |
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description | •Shape features presented greatest potential on nodal metastasis pattern recognition.•Gray-level cooccurrence matrix texture features presented greatest potential on distant metastasis and histopathological pattern recognition.•Our radiomics model may provide additional information for therapy decision support based on metastases prediction and aid the histopathological subtype diagnosis.
Background and Objectives: lung cancer is the leading cause of cancer-related deaths in the world, and its poor prognosis varies markedly according to tumor staging. Computed tomography (CT) is the imaging modality of choice for lung cancer evaluation, being used for diagnosis and clinical staging. Besides tumor stage, other features, like histopathological subtype, can also add prognostic information. In this work, radiomics-based CT features were used to predict lung cancer histopathology and metastases using machine learning models. Methods: local image datasets of confirmed primary malignant pulmonary tumors were retrospectively evaluated for testing and validation. CT images acquired with same protocol were semiautomatically segmented. Tumors were characterized by clinical features and computer attributes of intensity, histogram, texture, shape, and volume. Three machine learning classifiers used up to 100 selected features to perform the analysis. Results: radiomics-based features yielded areas under the receiver operating characteristic curve of 0.89, 0.97, and 0.92 at testing and 0.75, 0.71, and 0.81 at validation for lymph nodal metastasis, distant metastasis, and histopathology pattern recognition, respectively. Conclusions: the radiomics characterization approach presented great potential to be used in a computational model to aid lung cancer histopathological subtype diagnosis as a “virtual biopsy” and metastatic prediction for therapy decision support without the necessity of a whole-body imaging scanning. |
doi_str_mv | 10.1016/j.cmpb.2018.02.015 |
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Background and Objectives: lung cancer is the leading cause of cancer-related deaths in the world, and its poor prognosis varies markedly according to tumor staging. Computed tomography (CT) is the imaging modality of choice for lung cancer evaluation, being used for diagnosis and clinical staging. Besides tumor stage, other features, like histopathological subtype, can also add prognostic information. In this work, radiomics-based CT features were used to predict lung cancer histopathology and metastases using machine learning models. Methods: local image datasets of confirmed primary malignant pulmonary tumors were retrospectively evaluated for testing and validation. CT images acquired with same protocol were semiautomatically segmented. Tumors were characterized by clinical features and computer attributes of intensity, histogram, texture, shape, and volume. Three machine learning classifiers used up to 100 selected features to perform the analysis. Results: radiomics-based features yielded areas under the receiver operating characteristic curve of 0.89, 0.97, and 0.92 at testing and 0.75, 0.71, and 0.81 at validation for lymph nodal metastasis, distant metastasis, and histopathology pattern recognition, respectively. Conclusions: the radiomics characterization approach presented great potential to be used in a computational model to aid lung cancer histopathological subtype diagnosis as a “virtual biopsy” and metastatic prediction for therapy decision support without the necessity of a whole-body imaging scanning.</description><identifier>ISSN: 0169-2607</identifier><identifier>EISSN: 1872-7565</identifier><identifier>DOI: 10.1016/j.cmpb.2018.02.015</identifier><identifier>PMID: 29650315</identifier><language>eng</language><publisher>Ireland: Elsevier B.V</publisher><subject>Lung cancer ; Metastasis prediction ; Pattern recognition ; Quantitative image analysis ; Radiomics</subject><ispartof>Computer methods and programs in biomedicine, 2018-06, Vol.159, p.23-30</ispartof><rights>2018 Elsevier B.V.</rights><rights>Copyright © 2018 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c400t-19846c4445b9b5d0a22c9822fcdb68f69b4c291f66168bd884a8a7d9552a53b13</citedby><cites>FETCH-LOGICAL-c400t-19846c4445b9b5d0a22c9822fcdb68f69b4c291f66168bd884a8a7d9552a53b13</cites><orcidid>0000-0002-7271-2774 ; 0000-0002-8202-588X ; 0000-0002-7160-4691 ; 0000-0002-7687-3161</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0169260717309410$$EHTML$$P50$$Gelsevier$$Hfree_for_read</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/29650315$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ferreira Junior, José Raniery</creatorcontrib><creatorcontrib>Koenigkam-Santos, Marcel</creatorcontrib><creatorcontrib>Cipriano, Federico Enrique Garcia</creatorcontrib><creatorcontrib>Fabro, Alexandre Todorovic</creatorcontrib><creatorcontrib>Azevedo-Marques, Paulo Mazzoncini de</creatorcontrib><title>Radiomics-based features for pattern recognition of lung cancer histopathology and metastases</title><title>Computer methods and programs in biomedicine</title><addtitle>Comput Methods Programs Biomed</addtitle><description>•Shape features presented greatest potential on nodal metastasis pattern recognition.•Gray-level cooccurrence matrix texture features presented greatest potential on distant metastasis and histopathological pattern recognition.•Our radiomics model may provide additional information for therapy decision support based on metastases prediction and aid the histopathological subtype diagnosis.
Background and Objectives: lung cancer is the leading cause of cancer-related deaths in the world, and its poor prognosis varies markedly according to tumor staging. Computed tomography (CT) is the imaging modality of choice for lung cancer evaluation, being used for diagnosis and clinical staging. Besides tumor stage, other features, like histopathological subtype, can also add prognostic information. In this work, radiomics-based CT features were used to predict lung cancer histopathology and metastases using machine learning models. Methods: local image datasets of confirmed primary malignant pulmonary tumors were retrospectively evaluated for testing and validation. CT images acquired with same protocol were semiautomatically segmented. Tumors were characterized by clinical features and computer attributes of intensity, histogram, texture, shape, and volume. Three machine learning classifiers used up to 100 selected features to perform the analysis. Results: radiomics-based features yielded areas under the receiver operating characteristic curve of 0.89, 0.97, and 0.92 at testing and 0.75, 0.71, and 0.81 at validation for lymph nodal metastasis, distant metastasis, and histopathology pattern recognition, respectively. Conclusions: the radiomics characterization approach presented great potential to be used in a computational model to aid lung cancer histopathological subtype diagnosis as a “virtual biopsy” and metastatic prediction for therapy decision support without the necessity of a whole-body imaging scanning.</description><subject>Lung cancer</subject><subject>Metastasis prediction</subject><subject>Pattern recognition</subject><subject>Quantitative image analysis</subject><subject>Radiomics</subject><issn>0169-2607</issn><issn>1872-7565</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><recordid>eNp9kMtKLDEURYMo2j5-wMElwzupMklV0ilwIuILBEF0KCGPU22aqkrfJCX496ZpvUPhwJmsvWEvhM4pqSmh4mJd23FjakaorAmrCeV7aEHlklVLLvg-WhSoq5ggyyN0nNKaEMI4F4foiHWCk4byBXp71s6H0dtUGZ3A4R50niMk3IeINzpniBOOYMNq8tmHCYceD_O0wlZPFiJ-9ymHwr2HIaw-sZ4cHiHrVA7SKTro9ZDg7PufoNfbm5fr--rx6e7h-uqxsi0huaKdbIVt25abznBHNGO2k4z11hkhe9GZ1rKO9kJQIY2TstVSL13HOdO8MbQ5QX93vZsY_s2Qshp9sjAMeoIwJ8XK8IY2grQFZTvUxpBShF5toh91_FSUqK1WtVZbrWqrVRGmitYS-vPdP5sR3P_Ij8cCXO4AKCs_PESVrIciyPniLisX_G_9XygyicU</recordid><startdate>201806</startdate><enddate>201806</enddate><creator>Ferreira Junior, José Raniery</creator><creator>Koenigkam-Santos, Marcel</creator><creator>Cipriano, Federico Enrique Garcia</creator><creator>Fabro, Alexandre Todorovic</creator><creator>Azevedo-Marques, Paulo Mazzoncini de</creator><general>Elsevier B.V</general><scope>6I.</scope><scope>AAFTH</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-7271-2774</orcidid><orcidid>https://orcid.org/0000-0002-8202-588X</orcidid><orcidid>https://orcid.org/0000-0002-7160-4691</orcidid><orcidid>https://orcid.org/0000-0002-7687-3161</orcidid></search><sort><creationdate>201806</creationdate><title>Radiomics-based features for pattern recognition of lung cancer histopathology and metastases</title><author>Ferreira Junior, José Raniery ; Koenigkam-Santos, Marcel ; Cipriano, Federico Enrique Garcia ; Fabro, Alexandre Todorovic ; Azevedo-Marques, Paulo Mazzoncini de</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c400t-19846c4445b9b5d0a22c9822fcdb68f69b4c291f66168bd884a8a7d9552a53b13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2018</creationdate><topic>Lung cancer</topic><topic>Metastasis prediction</topic><topic>Pattern recognition</topic><topic>Quantitative image analysis</topic><topic>Radiomics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ferreira Junior, José Raniery</creatorcontrib><creatorcontrib>Koenigkam-Santos, Marcel</creatorcontrib><creatorcontrib>Cipriano, Federico Enrique Garcia</creatorcontrib><creatorcontrib>Fabro, Alexandre Todorovic</creatorcontrib><creatorcontrib>Azevedo-Marques, Paulo Mazzoncini de</creatorcontrib><collection>ScienceDirect Open Access Titles</collection><collection>Elsevier:ScienceDirect:Open Access</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Computer methods and programs in biomedicine</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ferreira Junior, José Raniery</au><au>Koenigkam-Santos, Marcel</au><au>Cipriano, Federico Enrique Garcia</au><au>Fabro, Alexandre Todorovic</au><au>Azevedo-Marques, Paulo Mazzoncini de</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Radiomics-based features for pattern recognition of lung cancer histopathology and metastases</atitle><jtitle>Computer methods and programs in biomedicine</jtitle><addtitle>Comput Methods Programs Biomed</addtitle><date>2018-06</date><risdate>2018</risdate><volume>159</volume><spage>23</spage><epage>30</epage><pages>23-30</pages><issn>0169-2607</issn><eissn>1872-7565</eissn><abstract>•Shape features presented greatest potential on nodal metastasis pattern recognition.•Gray-level cooccurrence matrix texture features presented greatest potential on distant metastasis and histopathological pattern recognition.•Our radiomics model may provide additional information for therapy decision support based on metastases prediction and aid the histopathological subtype diagnosis.
Background and Objectives: lung cancer is the leading cause of cancer-related deaths in the world, and its poor prognosis varies markedly according to tumor staging. Computed tomography (CT) is the imaging modality of choice for lung cancer evaluation, being used for diagnosis and clinical staging. Besides tumor stage, other features, like histopathological subtype, can also add prognostic information. In this work, radiomics-based CT features were used to predict lung cancer histopathology and metastases using machine learning models. Methods: local image datasets of confirmed primary malignant pulmonary tumors were retrospectively evaluated for testing and validation. CT images acquired with same protocol were semiautomatically segmented. Tumors were characterized by clinical features and computer attributes of intensity, histogram, texture, shape, and volume. Three machine learning classifiers used up to 100 selected features to perform the analysis. Results: radiomics-based features yielded areas under the receiver operating characteristic curve of 0.89, 0.97, and 0.92 at testing and 0.75, 0.71, and 0.81 at validation for lymph nodal metastasis, distant metastasis, and histopathology pattern recognition, respectively. Conclusions: the radiomics characterization approach presented great potential to be used in a computational model to aid lung cancer histopathological subtype diagnosis as a “virtual biopsy” and metastatic prediction for therapy decision support without the necessity of a whole-body imaging scanning.</abstract><cop>Ireland</cop><pub>Elsevier B.V</pub><pmid>29650315</pmid><doi>10.1016/j.cmpb.2018.02.015</doi><tpages>8</tpages><orcidid>https://orcid.org/0000-0002-7271-2774</orcidid><orcidid>https://orcid.org/0000-0002-8202-588X</orcidid><orcidid>https://orcid.org/0000-0002-7160-4691</orcidid><orcidid>https://orcid.org/0000-0002-7687-3161</orcidid><oa>free_for_read</oa></addata></record> |
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subjects | Lung cancer Metastasis prediction Pattern recognition Quantitative image analysis Radiomics |
title | Radiomics-based features for pattern recognition of lung cancer histopathology and metastases |
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