Seven Salmonella Typhimurium Outbreaks in Australia Linked by Trace-Back and Whole Genome Sequencing
Salmonella Typhimurium is a common cause of foodborne illness in Australia. We report on seven outbreaks of Salmonella Typhimurium multilocus variable-number tandem-repeat analysis (MLVA) 03-26-13-08-523 (European convention 2-24-12-7-0212) in three Australian states and territories investigated bet...
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| Veröffentlicht in: | Foodborne pathogens and disease 2018-05, Vol.15 (5), p.285-292 |
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| creator | Ford, Laura Wang, Qinning Stafford, Russell Ressler, Kelly-Anne Norton, Sophie Shadbolt, Craig Hope, Kirsty Franklin, Neil Krsteski, Radomir Carswell, Adrienne Carter, Glen P Seemann, Torsten Howard, Peter Valcanis, Mary Castillo, Cristina Fabiola Sotomayor Bates, John Glass, Kathryn Williamson, Deborah A Sintchenko, Vitali Howden, Benjamin P Kirk, Martyn D |
| description | Salmonella Typhimurium is a common cause of foodborne illness in Australia. We report on seven outbreaks of Salmonella Typhimurium multilocus variable-number tandem-repeat analysis (MLVA) 03-26-13-08-523 (European convention 2-24-12-7-0212) in three Australian states and territories investigated between November 2015 and March 2016. We identified a common egg grading facility in five of the outbreaks. While no Salmonella Typhimurium was detected at the grading facility and eggs could not be traced back to a particular farm, whole genome sequencing (WGS) of isolates from cases from all seven outbreaks indicated a common source. WGS was able to provide higher discriminatory power than MLVA and will likely link more Salmonella Typhimurium cases between states and territories in the future. National harmonization of Salmonella surveillance is important for effective implementation of WGS for Salmonella outbreak investigations. |
| doi_str_mv | 10.1089/fpd.2017.2353 |
| format | Article |
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We report on seven outbreaks of Salmonella Typhimurium multilocus variable-number tandem-repeat analysis (MLVA) 03-26-13-08-523 (European convention 2-24-12-7-0212) in three Australian states and territories investigated between November 2015 and March 2016. We identified a common egg grading facility in five of the outbreaks. While no Salmonella Typhimurium was detected at the grading facility and eggs could not be traced back to a particular farm, whole genome sequencing (WGS) of isolates from cases from all seven outbreaks indicated a common source. WGS was able to provide higher discriminatory power than MLVA and will likely link more Salmonella Typhimurium cases between states and territories in the future. 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National harmonization of Salmonella surveillance is important for effective implementation of WGS for Salmonella outbreak investigations.</description><subject>Australia - epidemiology</subject><subject>Disease Outbreaks</subject><subject>Eggs - microbiology</subject><subject>Genome, Bacterial</subject><subject>Humans</subject><subject>Minisatellite Repeats</subject><subject>Salmonella Food Poisoning - epidemiology</subject><subject>Salmonella typhimurium - genetics</subject><subject>Whole Genome Sequencing</subject><issn>1535-3141</issn><issn>1556-7125</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2018</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo9kD1PwzAQhi0EoqUwsiKPLCn-iONkLBUUpEodGonRcuILNU2cYDdI_fckauGW94ZH7-kehO4pmVOSZk9VZ-aMUDlnXPALNKVCJJGkTFyOOxcRpzGdoJsQvghhGRPyGk1YlvCUSjJFZgs_4PBW103roK41zo_dzja9t32DN_2h8KD3AVuHF304eF1bjdfW7cHg4ohzr0uInnW5x9oZ_LFra8ArcG0DeAvfPbjSus9bdFXpOsDdOWcof33Jl2_RerN6Xy7WUckyfogkM1VMKzCZyRINqYxLTo2U1BhqmGFATGFgmFRKwzPBOCUFLeJYCME58Bl6PNV2vh1Oh4NqbCjHpxy0fVCMsJjQRCbpgEYntPRtCB4q1XnbaH9UlKjRqxq8qtGrGr0O_MO5ui8aMP_0n0j-C6q1dEE</recordid><startdate>201805</startdate><enddate>201805</enddate><creator>Ford, Laura</creator><creator>Wang, Qinning</creator><creator>Stafford, Russell</creator><creator>Ressler, Kelly-Anne</creator><creator>Norton, Sophie</creator><creator>Shadbolt, Craig</creator><creator>Hope, Kirsty</creator><creator>Franklin, Neil</creator><creator>Krsteski, Radomir</creator><creator>Carswell, Adrienne</creator><creator>Carter, Glen P</creator><creator>Seemann, Torsten</creator><creator>Howard, Peter</creator><creator>Valcanis, Mary</creator><creator>Castillo, Cristina Fabiola Sotomayor</creator><creator>Bates, John</creator><creator>Glass, Kathryn</creator><creator>Williamson, Deborah A</creator><creator>Sintchenko, Vitali</creator><creator>Howden, Benjamin P</creator><creator>Kirk, Martyn D</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>201805</creationdate><title>Seven Salmonella Typhimurium Outbreaks in Australia Linked by Trace-Back and Whole Genome Sequencing</title><author>Ford, Laura ; 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| source | MEDLINE; Alma/SFX Local Collection |
| subjects | Australia - epidemiology Disease Outbreaks Eggs - microbiology Genome, Bacterial Humans Minisatellite Repeats Salmonella Food Poisoning - epidemiology Salmonella typhimurium - genetics Whole Genome Sequencing |
| title | Seven Salmonella Typhimurium Outbreaks in Australia Linked by Trace-Back and Whole Genome Sequencing |
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