A potential mechanism of energy‐metabolism oscillation in an aerobic chemostat culture of the yeast Saccharomyces cerevisiae
The energy‐metabolism oscillation in aerobic chemostat cultures of yeast is a periodic change of the respiro‐fermentative and respiratory phase. In the respiro‐fermentative phase, the NADH level was kept high and respiration was suppressed, and glucose was anabolized into trehalose and glycogen at a...
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description | The energy‐metabolism oscillation in aerobic chemostat cultures of yeast is a periodic change of the respiro‐fermentative and respiratory phase. In the respiro‐fermentative phase, the NADH level was kept high and respiration was suppressed, and glucose was anabolized into trehalose and glycogen at a rate comparable to that of catabolism. On the transition to the respiratory phase, cAMP levels increased triggering the breakdown of storage carbohydrates and the increased influx of glucose into the glycolytic pathway activated production of glycerol and ethanol consuming NADH. The resulting increase in the NAD+/NADH ratio stimulated respiration in combination with a decrease in the level of ATP, which was consumed mainly in the formation of biomass accompanying budding, and the accumulated ethanol and glycerol were gradually degraded by respiration via NAD+‐dependent oxidation to acetate and the respiratory phase ceased after the recovery of NADH and ATP levels. However, the mRNA levels of both synthetic and degradative enzymes of storage carbohydrates were increased around the early respiro‐fermentative phase, when storage carbohydrates are being synthesized, suggesting that the synthetic enzymes were expressed directly as active forms while the degradative enzymes were activated late by cAMP. In summary, the energy‐metabolism oscillation is basically regulated by a feedback loop of oxido‐reductive reactions of energy metabolism mediated by metabolites like NADH and ATP, and is modulated by metabolism of storage carbohydrates in combination of post‐translational and transcriptional regulation of the related enzymes. A potential mechanism of energy‐metabolism oscillation is proposed. |
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In the respiro‐fermentative phase, the NADH level was kept high and respiration was suppressed, and glucose was anabolized into trehalose and glycogen at a rate comparable to that of catabolism. On the transition to the respiratory phase, cAMP levels increased triggering the breakdown of storage carbohydrates and the increased influx of glucose into the glycolytic pathway activated production of glycerol and ethanol consuming NADH. The resulting increase in the NAD+/NADH ratio stimulated respiration in combination with a decrease in the level of ATP, which was consumed mainly in the formation of biomass accompanying budding, and the accumulated ethanol and glycerol were gradually degraded by respiration via NAD+‐dependent oxidation to acetate and the respiratory phase ceased after the recovery of NADH and ATP levels. However, the mRNA levels of both synthetic and degradative enzymes of storage carbohydrates were increased around the early respiro‐fermentative phase, when storage carbohydrates are being synthesized, suggesting that the synthetic enzymes were expressed directly as active forms while the degradative enzymes were activated late by cAMP. In summary, the energy‐metabolism oscillation is basically regulated by a feedback loop of oxido‐reductive reactions of energy metabolism mediated by metabolites like NADH and ATP, and is modulated by metabolism of storage carbohydrates in combination of post‐translational and transcriptional regulation of the related enzymes. A potential mechanism of energy‐metabolism oscillation is proposed.</description><identifier>ISSN: 1742-464X</identifier><identifier>EISSN: 1742-4658</identifier><identifier>DOI: 10.1111/j.1742-4658.2006.05201.x</identifier><identifier>PMID: 16623706</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Publishing Ltd</publisher><subject>Adenosine Triphosphate - metabolism ; Aerobiosis ; Blotting, Northern ; Cell Culture Techniques ; continuous culture ; Cyclic AMP - metabolism ; dissipative structure ; Energy Metabolism ; energy‐metabolism oscillation ; Enzymes ; Fermentation ; Glucose ; Kinetics ; Metabolism ; NAD - metabolism ; NADH ; Oxygen Consumption ; Periodicity ; Respiration ; Saccharomyces cerevisiae ; Saccharomyces cerevisiae - cytology ; Saccharomyces cerevisiae - growth & development ; Saccharomyces cerevisiae - metabolism ; Saccharomyces cerevisiae Proteins - physiology ; Transcription Factors - physiology ; Transcription, Genetic ; trehalose ; Yeast</subject><ispartof>The FEBS journal, 2006-04, Vol.273 (8), p.1696-1709</ispartof><rights>2006 The Authors Journal compilation 2006 FEBS</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4451-556ca073d7349b8fe6da8aea2706f1f5a3d1593d6b615723e0c6f72a70906f453</citedby><cites>FETCH-LOGICAL-c4451-556ca073d7349b8fe6da8aea2706f1f5a3d1593d6b615723e0c6f72a70906f453</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fj.1742-4658.2006.05201.x$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fj.1742-4658.2006.05201.x$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,777,781,1412,1428,27905,27906,45555,45556,46390,46814</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/16623706$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Xu, Zhaojun</creatorcontrib><creatorcontrib>Tsurugi, Kunio</creatorcontrib><title>A potential mechanism of energy‐metabolism oscillation in an aerobic chemostat culture of the yeast Saccharomyces cerevisiae</title><title>The FEBS journal</title><addtitle>FEBS J</addtitle><description>The energy‐metabolism oscillation in aerobic chemostat cultures of yeast is a periodic change of the respiro‐fermentative and respiratory phase. In the respiro‐fermentative phase, the NADH level was kept high and respiration was suppressed, and glucose was anabolized into trehalose and glycogen at a rate comparable to that of catabolism. On the transition to the respiratory phase, cAMP levels increased triggering the breakdown of storage carbohydrates and the increased influx of glucose into the glycolytic pathway activated production of glycerol and ethanol consuming NADH. The resulting increase in the NAD+/NADH ratio stimulated respiration in combination with a decrease in the level of ATP, which was consumed mainly in the formation of biomass accompanying budding, and the accumulated ethanol and glycerol were gradually degraded by respiration via NAD+‐dependent oxidation to acetate and the respiratory phase ceased after the recovery of NADH and ATP levels. However, the mRNA levels of both synthetic and degradative enzymes of storage carbohydrates were increased around the early respiro‐fermentative phase, when storage carbohydrates are being synthesized, suggesting that the synthetic enzymes were expressed directly as active forms while the degradative enzymes were activated late by cAMP. In summary, the energy‐metabolism oscillation is basically regulated by a feedback loop of oxido‐reductive reactions of energy metabolism mediated by metabolites like NADH and ATP, and is modulated by metabolism of storage carbohydrates in combination of post‐translational and transcriptional regulation of the related enzymes. A potential mechanism of energy‐metabolism oscillation is proposed.</description><subject>Adenosine Triphosphate - metabolism</subject><subject>Aerobiosis</subject><subject>Blotting, Northern</subject><subject>Cell Culture Techniques</subject><subject>continuous culture</subject><subject>Cyclic AMP - metabolism</subject><subject>dissipative structure</subject><subject>Energy Metabolism</subject><subject>energy‐metabolism oscillation</subject><subject>Enzymes</subject><subject>Fermentation</subject><subject>Glucose</subject><subject>Kinetics</subject><subject>Metabolism</subject><subject>NAD - metabolism</subject><subject>NADH</subject><subject>Oxygen Consumption</subject><subject>Periodicity</subject><subject>Respiration</subject><subject>Saccharomyces cerevisiae</subject><subject>Saccharomyces cerevisiae - cytology</subject><subject>Saccharomyces cerevisiae - growth & development</subject><subject>Saccharomyces cerevisiae - metabolism</subject><subject>Saccharomyces cerevisiae Proteins - physiology</subject><subject>Transcription Factors - physiology</subject><subject>Transcription, Genetic</subject><subject>trehalose</subject><subject>Yeast</subject><issn>1742-464X</issn><issn>1742-4658</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkc9q3DAQxkVpaZJNX6GIHHpbV_-9vhTSkLSFQA9JIDchy-OuFtvaSnIbX0Ieoc-YJ6mcXRLoqWJAg_Sbj5n5EMKUFDSfj5uCloIthZKrghGiCiIZocXdK3T4_PH6ORe3B-goxg0hXIqqeosOqFKMl0QdovtTvPUJhuRMh3uwazO42GPfYhgg_JgeH_70kEztu6fnaF3XmeT8gN2ATQ4IvnYW2zX0PiaTsB27NAaYJdIa8AQmJnxlbJYOvp8sRGwhwC8XnYFj9KY1XYR3-3uBbi7Or8--Li-_f_l2dnq5tEJIupRSWUNK3pRcVPWqBdWYlQHD8gwtbaXhDZUVb1StqCwZB2JVWzJTkioDQvIF-rDT3Qb_c4SYdO-ihTzLAH6MmhHGFc-xQCf_gBs_hiH3lhmRdy9VmaHVDrLBxxig1dvgehMmTYmeDdIbPe9ezz7o2SD9ZJC-y6Xv9_pj3UPzUrh3JAOfdsBv18H038L64vzz1Zzyv26soYA</recordid><startdate>200604</startdate><enddate>200604</enddate><creator>Xu, Zhaojun</creator><creator>Tsurugi, Kunio</creator><general>Blackwell Publishing Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7TK</scope><scope>7TM</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7QO</scope></search><sort><creationdate>200604</creationdate><title>A potential mechanism of energy‐metabolism oscillation in an aerobic chemostat culture of the yeast Saccharomyces cerevisiae</title><author>Xu, Zhaojun ; Tsurugi, Kunio</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4451-556ca073d7349b8fe6da8aea2706f1f5a3d1593d6b615723e0c6f72a70906f453</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><topic>Adenosine Triphosphate - metabolism</topic><topic>Aerobiosis</topic><topic>Blotting, Northern</topic><topic>Cell Culture Techniques</topic><topic>continuous culture</topic><topic>Cyclic AMP - metabolism</topic><topic>dissipative structure</topic><topic>Energy Metabolism</topic><topic>energy‐metabolism oscillation</topic><topic>Enzymes</topic><topic>Fermentation</topic><topic>Glucose</topic><topic>Kinetics</topic><topic>Metabolism</topic><topic>NAD - metabolism</topic><topic>NADH</topic><topic>Oxygen Consumption</topic><topic>Periodicity</topic><topic>Respiration</topic><topic>Saccharomyces cerevisiae</topic><topic>Saccharomyces cerevisiae - cytology</topic><topic>Saccharomyces cerevisiae - growth & development</topic><topic>Saccharomyces cerevisiae - metabolism</topic><topic>Saccharomyces cerevisiae Proteins - physiology</topic><topic>Transcription Factors - physiology</topic><topic>Transcription, Genetic</topic><topic>trehalose</topic><topic>Yeast</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Xu, Zhaojun</creatorcontrib><creatorcontrib>Tsurugi, Kunio</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>Biotechnology Research Abstracts</collection><jtitle>The FEBS journal</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Xu, Zhaojun</au><au>Tsurugi, Kunio</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A potential mechanism of energy‐metabolism oscillation in an aerobic chemostat culture of the yeast Saccharomyces cerevisiae</atitle><jtitle>The FEBS journal</jtitle><addtitle>FEBS J</addtitle><date>2006-04</date><risdate>2006</risdate><volume>273</volume><issue>8</issue><spage>1696</spage><epage>1709</epage><pages>1696-1709</pages><issn>1742-464X</issn><eissn>1742-4658</eissn><abstract>The energy‐metabolism oscillation in aerobic chemostat cultures of yeast is a periodic change of the respiro‐fermentative and respiratory phase. In the respiro‐fermentative phase, the NADH level was kept high and respiration was suppressed, and glucose was anabolized into trehalose and glycogen at a rate comparable to that of catabolism. On the transition to the respiratory phase, cAMP levels increased triggering the breakdown of storage carbohydrates and the increased influx of glucose into the glycolytic pathway activated production of glycerol and ethanol consuming NADH. The resulting increase in the NAD+/NADH ratio stimulated respiration in combination with a decrease in the level of ATP, which was consumed mainly in the formation of biomass accompanying budding, and the accumulated ethanol and glycerol were gradually degraded by respiration via NAD+‐dependent oxidation to acetate and the respiratory phase ceased after the recovery of NADH and ATP levels. However, the mRNA levels of both synthetic and degradative enzymes of storage carbohydrates were increased around the early respiro‐fermentative phase, when storage carbohydrates are being synthesized, suggesting that the synthetic enzymes were expressed directly as active forms while the degradative enzymes were activated late by cAMP. In summary, the energy‐metabolism oscillation is basically regulated by a feedback loop of oxido‐reductive reactions of energy metabolism mediated by metabolites like NADH and ATP, and is modulated by metabolism of storage carbohydrates in combination of post‐translational and transcriptional regulation of the related enzymes. A potential mechanism of energy‐metabolism oscillation is proposed.</abstract><cop>Oxford, UK</cop><pub>Blackwell Publishing Ltd</pub><pmid>16623706</pmid><doi>10.1111/j.1742-4658.2006.05201.x</doi><tpages>14</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Adenosine Triphosphate - metabolism Aerobiosis Blotting, Northern Cell Culture Techniques continuous culture Cyclic AMP - metabolism dissipative structure Energy Metabolism energy‐metabolism oscillation Enzymes Fermentation Glucose Kinetics Metabolism NAD - metabolism NADH Oxygen Consumption Periodicity Respiration Saccharomyces cerevisiae Saccharomyces cerevisiae - cytology Saccharomyces cerevisiae - growth & development Saccharomyces cerevisiae - metabolism Saccharomyces cerevisiae Proteins - physiology Transcription Factors - physiology Transcription, Genetic trehalose Yeast |
title | A potential mechanism of energy‐metabolism oscillation in an aerobic chemostat culture of the yeast Saccharomyces cerevisiae |
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